RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 NEUROD6Q96NK8 337 aa17.77■□□□□ 0.43
SSH3-210ENST00000532881 HSP90AA2PQ14568 343 aaPredicted RBP17.76■□□□□ 0.43
SSH3-210ENST00000532881 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
SSH3-210ENST00000532881 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
SSH3-210ENST00000532881 SIPA1L3O60292 1781 aaPredicted RBP17.76■□□□□ 0.43
SSH3-210ENST00000532881 ZNF500O60304 480 aaPredicted RBP17.76■□□□□ 0.43
SSH3-210ENST00000532881 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
SSH3-210ENST00000532881 RPS6KB1P23443 525 aa17.76■□□□□ 0.43
SSH3-210ENST00000532881 ARID3AQ99856 593 aa17.76■□□□□ 0.43
SSH3-210ENST00000532881 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
SSH3-210ENST00000532881 CABP4P57796 275 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 HS1BP3Q53T59 392 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 CCDC85AQ96PX6 553 aaPredicted RBP17.75■□□□□ 0.43
SSH3-210ENST00000532881 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
SSH3-210ENST00000532881 PHRF1Q9P1Y6 1649 aaKnown RBP17.75■□□□□ 0.43
SSH3-210ENST00000532881 PHF14O94880 888 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 A1BGP04217 495 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 CKAP2LQ8IYA6 745 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
SSH3-210ENST00000532881 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
SSH3-210ENST00000532881 NBPF26B4DH59 902 aa17.74■□□□□ 0.43
SSH3-210ENST00000532881 NBPF14Q5TI25 921 aa17.74■□□□□ 0.43
SSH3-210ENST00000532881 NBPF10Q6P3W6 841 aaKnown RBP17.74■□□□□ 0.43
SSH3-210ENST00000532881 NBPF15Q8N660 670 aa17.74■□□□□ 0.43
SSH3-210ENST00000532881 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
SSH3-210ENST00000532881 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
SSH3-210ENST00000532881 CEBPZQ03701 1054 aaKnown RBP17.74■□□□□ 0.43
SSH3-210ENST00000532881 CHST3Q7LGC8 479 aa17.74■□□□□ 0.43
SSH3-210ENST00000532881 TRPM3Q9HCF6 1732 aaPredicted RBP17.74■□□□□ 0.43
SSH3-210ENST00000532881 ZNF609O15014 1411 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 CYP21A2P08686 494 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 HDAC5Q9UQL6 1122 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 ATF3P18847 181 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
SSH3-210ENST00000532881 Q6ZUG5 572 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 SPC24Q8NBT2 197 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 FUCA2Q9BTY2 467 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
SSH3-210ENST00000532881 GOLIM4O00461 696 aa17.72■□□□□ 0.43
SSH3-210ENST00000532881 PSMA5P28066 241 aa17.72■□□□□ 0.43
SSH3-210ENST00000532881 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
SSH3-210ENST00000532881 STOX1Q6ZVD7 989 aa17.72■□□□□ 0.43
SSH3-210ENST00000532881 FMNL2Q96PY5 1086 aa17.72■□□□□ 0.43
SSH3-210ENST00000532881 ATP6V1DQ9Y5K8 247 aa17.72■□□□□ 0.43
SSH3-210ENST00000532881 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
SSH3-210ENST00000532881 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 HIP1O00291 1037 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 ATP5JP18859 108 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 TSC1Q92574 1164 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 FTOQ9C0B1 505 aaKnown RBP eCLIP17.71■□□□□ 0.43
SSH3-210ENST00000532881 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 FAM13BQ9NYF5 915 aa17.71■□□□□ 0.43
SSH3-210ENST00000532881 CASP7P55210 303 aa17.7■□□□□ 0.42
SSH3-210ENST00000532881 BRF1Q92994 677 aa17.7■□□□□ 0.42
SSH3-210ENST00000532881 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
SSH3-210ENST00000532881 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
SSH3-210ENST00000532881 NAP1L2Q9ULW6 460 aaPredicted RBP17.7■□□□□ 0.42
SSH3-210ENST00000532881 TMEM94Q12767 1356 aa17.7■□□□□ 0.42
SSH3-210ENST00000532881 UQCRHLA0A096LP55 91 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 UQCRHP07919 91 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 FOXO4P98177 505 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 DACT1Q9NYF0 836 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 A0A087WWV3 80 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 KDM4AO75164 1064 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
SSH3-210ENST00000532881 KRT85P78386 507 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 LUZP1Q86V48 1076 aa17.69■□□□□ 0.42
SSH3-210ENST00000532881 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
SSH3-210ENST00000532881 RABL6Q3YEC7 729 aaPredicted RBP17.68■□□□□ 0.42
SSH3-210ENST00000532881 DNTTIP2Q5QJE6 756 aaKnown RBP17.68■□□□□ 0.42
SSH3-210ENST00000532881 ATG9AQ7Z3C6 839 aa17.68■□□□□ 0.42
SSH3-210ENST00000532881 TPM2P07951 284 aa17.68■□□□□ 0.42
SSH3-210ENST00000532881 NCOA5Q9HCD5 579 aaKnown RBP17.68■□□□□ 0.42
SSH3-210ENST00000532881 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
SSH3-210ENST00000532881 FGD1P98174 961 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 GUCY1B3Q02153 619 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 SCRN1Q12765 414 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 TTLL5Q6EMB2 1281 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 NR1I2O75469 434 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 APOBRQ0VD83 1088 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 PGBD1Q96JS3 809 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 HAUS7Q99871 368 aa17.67■□□□□ 0.42
SSH3-210ENST00000532881 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
SSH3-210ENST00000532881 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
SSH3-210ENST00000532881 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
SSH3-210ENST00000532881 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
SSH3-210ENST00000532881 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
SSH3-210ENST00000532881 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
SSH3-210ENST00000532881 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 HSPA2P54652 639 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 RAB11FIP4Q86YS3 637 aa17.65■□□□□ 0.42
SSH3-210ENST00000532881 SYNE4Q8N205 404 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms