RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 DDX46Q7L014 1031 aaKnown RBP22.97■■□□□ 1.27
SMG1-203ENST00000532700 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
SMG1-203ENST00000532700 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
SMG1-203ENST00000532700 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
SMG1-203ENST00000532700 NCBP3Q53F19 620 aaKnown RBP22.96■■□□□ 1.27
SMG1-203ENST00000532700 RTFDC1Q9BY42 306 aaPredicted RBP22.96■■□□□ 1.27
SMG1-203ENST00000532700 PI4KAP2A4QPH2 592 aa22.95■■□□□ 1.26
SMG1-203ENST00000532700 PPIP5K2O43314 1243 aa22.95■■□□□ 1.26
SMG1-203ENST00000532700 BBOX1O75936 387 aa22.95■■□□□ 1.26
SMG1-203ENST00000532700 PI4KAP1Q8N8J0 262 aa22.95■■□□□ 1.26
SMG1-203ENST00000532700 ZBTB38Q8NAP3 1195 aaPredicted RBP22.95■■□□□ 1.26
SMG1-203ENST00000532700 SEC31BQ9NQW1 1179 aa22.95■■□□□ 1.26
SMG1-203ENST00000532700 MYH3P11055 1940 aa22.94■■□□□ 1.26
SMG1-203ENST00000532700 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
SMG1-203ENST00000532700 CWF19L2Q2TBE0 894 aaKnown RBP22.94■■□□□ 1.26
SMG1-203ENST00000532700 JDP2Q8WYK2 163 aa22.94■■□□□ 1.26
SMG1-203ENST00000532700 GJA3Q9Y6H8 435 aa22.94■■□□□ 1.26
SMG1-203ENST00000532700 CHADLQ6NUI6 762 aa22.93■■□□□ 1.26
SMG1-203ENST00000532700 DPP8Q6V1X1 898 aaPredicted RBP22.93■■□□□ 1.26
SMG1-203ENST00000532700 KSR2Q6VAB6 950 aa22.93■■□□□ 1.26
SMG1-203ENST00000532700 WDR63Q8IWG1 891 aa22.93■■□□□ 1.26
SMG1-203ENST00000532700 GPC2Q8N158 579 aa22.93■■□□□ 1.26
SMG1-203ENST00000532700 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
SMG1-203ENST00000532700 VAMP4O75379 141 aa22.92■■□□□ 1.26
SMG1-203ENST00000532700 SLC4A2P04920 1241 aa22.92■■□□□ 1.26
SMG1-203ENST00000532700 PCCAP05165 728 aaPredicted RBP22.92■■□□□ 1.26
SMG1-203ENST00000532700 SCNN1DP51172 638 aa22.92■■□□□ 1.26
SMG1-203ENST00000532700 MPNDQ8N594 471 aa22.92■■□□□ 1.26
SMG1-203ENST00000532700 CCDC191Q8NCU4 936 aa22.92■■□□□ 1.26
SMG1-203ENST00000532700 GPR101Q96P66 508 aaPredicted RBP22.92■■□□□ 1.26
SMG1-203ENST00000532700 CWC25Q9NXE8 425 aaPredicted RBP22.92■■□□□ 1.26
SMG1-203ENST00000532700 HACL1Q9UJ83 578 aa22.92■■□□□ 1.26
SMG1-203ENST00000532700 CACNA1FO60840 1977 aa22.91■■□□□ 1.26
SMG1-203ENST00000532700 EPHX2P34913 555 aa22.91■■□□□ 1.26
SMG1-203ENST00000532700 GPSM2P81274 684 aa22.91■■□□□ 1.26
SMG1-203ENST00000532700 GRIPAP1Q4V328 841 aa22.91■■□□□ 1.26
SMG1-203ENST00000532700 EAPPQ56P03 285 aaPredicted RBP22.91■■□□□ 1.26
SMG1-203ENST00000532700 NIM1KQ8IY84 436 aa22.91■■□□□ 1.26
SMG1-203ENST00000532700 ZNF521Q96K83 1311 aa22.9■■□□□ 1.26
SMG1-203ENST00000532700 IQCA1LA6NCM1 817 aa22.9■■□□□ 1.26
SMG1-203ENST00000532700 STK31Q9BXU1 1019 aa22.9■■□□□ 1.26
SMG1-203ENST00000532700 SCN9AQ15858 1988 aa22.89■■□□□ 1.26
SMG1-203ENST00000532700 YDJCA8MPS7 323 aa22.89■■□□□ 1.25
SMG1-203ENST00000532700 DDX58O95786 925 aaKnown RBP22.89■■□□□ 1.25
SMG1-203ENST00000532700 EPS15P42566 896 aa22.89■■□□□ 1.25
SMG1-203ENST00000532700 EIF6P56537 245 aaKnown RBP22.89■■□□□ 1.25
SMG1-203ENST00000532700 CXCL9Q07325 125 aa22.89■■□□□ 1.25
SMG1-203ENST00000532700 KIAA2012Q0VF49 1180 aa22.89■■□□□ 1.25
SMG1-203ENST00000532700 KLRG1Q96E93 195 aa22.89■■□□□ 1.25
SMG1-203ENST00000532700 POLLQ9UGP5 575 aa22.89■■□□□ 1.25
SMG1-203ENST00000532700 NEURL1BA8MQ27 555 aa22.88■■□□□ 1.25
SMG1-203ENST00000532700 FLIIQ13045 1269 aa22.88■■□□□ 1.25
SMG1-203ENST00000532700 LDHDQ86WU2 507 aa22.88■■□□□ 1.25
SMG1-203ENST00000532700 PASKQ96RG2 1323 aa22.87■■□□□ 1.25
SMG1-203ENST00000532700 ITGBL1O95965 494 aaPredicted RBP22.87■■□□□ 1.25
SMG1-203ENST00000532700 CDHR2Q9BYE9 1310 aa22.86■■□□□ 1.25
SMG1-203ENST00000532700 SHTN1A0MZ66 631 aa22.86■■□□□ 1.25
SMG1-203ENST00000532700 WTIPA6NIX2 430 aaPredicted RBP22.86■■□□□ 1.25
SMG1-203ENST00000532700 PDE8AO60658 829 aa22.86■■□□□ 1.25
SMG1-203ENST00000532700 RPS8P62241 208 aaKnown RBP22.86■■□□□ 1.25
SMG1-203ENST00000532700 FMR1Q06787 632 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMG1-203ENST00000532700 MAP1SQ66K74 1059 aaPredicted RBP22.86■■□□□ 1.25
SMG1-203ENST00000532700 ZNRF3Q9ULT6 936 aa22.86■■□□□ 1.25
SMG1-203ENST00000532700 NSFL1CQ9UNZ2 370 aaKnown RBP22.86■■□□□ 1.25
SMG1-203ENST00000532700 RAD17O75943 681 aa22.85■■□□□ 1.25
SMG1-203ENST00000532700 SUPT20HQ8NEM7 779 aa22.85■■□□□ 1.25
SMG1-203ENST00000532700 KCNQ5Q9NR82 932 aa22.85■■□□□ 1.25
SMG1-203ENST00000532700 F6X3S4 739 aa22.84■■□□□ 1.25
SMG1-203ENST00000532700 RIMBP2O15034 1052 aa22.84■■□□□ 1.25
SMG1-203ENST00000532700 TMC4Q7Z404 712 aa22.84■■□□□ 1.25
SMG1-203ENST00000532700 TMX4Q9H1E5 349 aaPredicted RBP22.84■■□□□ 1.25
SMG1-203ENST00000532700 ZNF646O15015 1829 aaPredicted RBP22.84■■□□□ 1.25
SMG1-203ENST00000532700 GMPSP49915 693 aaPredicted RBP22.83■■□□□ 1.25
SMG1-203ENST00000532700 CASP7P55210 303 aa22.83■■□□□ 1.25
SMG1-203ENST00000532700 CTSWP56202 376 aa22.83■■□□□ 1.25
SMG1-203ENST00000532700 UBE3BQ7Z3V4 1068 aa22.83■■□□□ 1.25
SMG1-203ENST00000532700 VPS33BQ9H267 617 aa22.83■■□□□ 1.25
SMG1-203ENST00000532700 DBNDD1Q9H9R9 158 aa22.83■■□□□ 1.25
SMG1-203ENST00000532700 A0A1B0GUL6 1792 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 H7C1W4 665 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 FKBP5Q13451 457 aaPredicted RBP22.82■■□□□ 1.24
SMG1-203ENST00000532700 JMYQ8N9B5 988 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 TTLL11Q8NHH1 800 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 TBC1D16Q8TBP0 767 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 GREM2Q9H772 168 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 CLEC11AQ9Y240 323 aa22.82■■□□□ 1.24
SMG1-203ENST00000532700 RTL9Q8NET4 1388 aa22.81■■□□□ 1.24
SMG1-203ENST00000532700 GCKRQ14397 625 aa22.81■■□□□ 1.24
SMG1-203ENST00000532700 DOK7Q18PE1 504 aa22.81■■□□□ 1.24
SMG1-203ENST00000532700 CCDC152Q4G0S7 254 aa22.81■■□□□ 1.24
SMG1-203ENST00000532700 DNAAF4Q8WXU2 420 aa22.81■■□□□ 1.24
SMG1-203ENST00000532700 GPRC5DQ9NZD1 345 aa22.81■■□□□ 1.24
SMG1-203ENST00000532700 PSME4Q14997 1843 aa22.8■■□□□ 1.24
SMG1-203ENST00000532700 C6orf229H3BNL8 230 aa22.8■■□□□ 1.24
SMG1-203ENST00000532700 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
SMG1-203ENST00000532700 WASHC4Q2M389 1173 aa22.8■■□□□ 1.24
SMG1-203ENST00000532700 CIAPIN1Q6FI81 312 aa22.8■■□□□ 1.24
SMG1-203ENST00000532700 CHMP4AQ9BY43 222 aa22.8■■□□□ 1.24
SMG1-203ENST00000532700 PNMA8AQ86V59 439 aaPredicted RBP22.79■■□□□ 1.24
SMG1-203ENST00000532700 ZBTB12Q9Y330 459 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms