RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MMP10P09238 476 aa27.19■■□□□ 1.94
PACSIN3-209ENST00000532457 LRRCC1Q9C099 1032 aa27.19■■□□□ 1.94
PACSIN3-209ENST00000532457 PARP3Q9Y6F1 533 aa27.19■■□□□ 1.94
PACSIN3-209ENST00000532457 CARMIL3Q8ND23 1372 aa27.18■■□□□ 1.94
PACSIN3-209ENST00000532457 RAB11FIP3O75154 756 aa27.18■■□□□ 1.94
PACSIN3-209ENST00000532457 NUTM1Q86Y26 1132 aa27.18■■□□□ 1.94
PACSIN3-209ENST00000532457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.18■■□□□ 1.94
PACSIN3-209ENST00000532457 HCLS1P14317 486 aaPredicted RBP27.17■■□□□ 1.94
PACSIN3-209ENST00000532457 RHPN1Q8TCX5 695 aa27.17■■□□□ 1.94
PACSIN3-209ENST00000532457 CCDC85AQ96PX6 553 aaPredicted RBP27.17■■□□□ 1.94
PACSIN3-209ENST00000532457 COPRSQ9NQ92 184 aa27.17■■□□□ 1.94
PACSIN3-209ENST00000532457 CHMP3Q9Y3E7 222 aa27.17■■□□□ 1.94
PACSIN3-209ENST00000532457 PLEKHM2Q8IWE5 1019 aa27.16■■□□□ 1.94
PACSIN3-209ENST00000532457 SIL1Q9H173 461 aa27.16■■□□□ 1.94
PACSIN3-209ENST00000532457 IL1RAPL2Q9NP60 686 aa27.16■■□□□ 1.94
PACSIN3-209ENST00000532457 SRCAPQ6ZRS2 3230 aa27.16■■□□□ 1.94
PACSIN3-209ENST00000532457 SH3TC1Q8TE82 1336 aa27.16■■□□□ 1.94
PACSIN3-209ENST00000532457 TTLL11Q8NHH1 800 aa27.16■■□□□ 1.94
PACSIN3-209ENST00000532457 SASH1O94885 1247 aa27.15■■□□□ 1.94
PACSIN3-209ENST00000532457 COL24A1Q17RW2 1714 aa27.15■■□□□ 1.94
PACSIN3-209ENST00000532457 POLRMTO00411 1230 aaKnown RBP27.14■■□□□ 1.94
PACSIN3-209ENST00000532457 ZNF594Q96JF6 807 aaPredicted RBP27.14■■□□□ 1.94
PACSIN3-209ENST00000532457 NYXQ9GZU5 481 aa27.14■■□□□ 1.94
PACSIN3-209ENST00000532457 PDE8AO60658 829 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 TSHZ2Q9NRE2 1034 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 NPHP1O15259 732 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 SERPINB2P05120 415 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 CTSWP56202 376 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 FAM161AQ3B820 660 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 ERFEQ4G0M1 354 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 HSP90AB4PQ58FF6 505 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 TPTE2Q6XPS3 522 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 NBPF5PQ86XG9 351 aaPredicted RBP27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 KIF1BPQ96EK5 621 aa27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 ZBTB47Q9UFB7 747 aaPredicted RBP27.13■■□□□ 1.93
PACSIN3-209ENST00000532457 DDR1Q08345 913 aa27.12■■□□□ 1.93
PACSIN3-209ENST00000532457 G3BP1Q13283 466 aaKnown RBP eCLIP27.12■■□□□ 1.93
PACSIN3-209ENST00000532457 OS9Q13438 667 aaPredicted RBP27.11■■□□□ 1.93
PACSIN3-209ENST00000532457 SGIP1Q9BQI5 828 aa27.11■■□□□ 1.93
PACSIN3-209ENST00000532457 GREM2Q9H772 168 aa27.11■■□□□ 1.93
PACSIN3-209ENST00000532457 PTGER2P43116 358 aa27.11■■□□□ 1.93
PACSIN3-209ENST00000532457 SALL3Q9BXA9 1300 aa27.11■■□□□ 1.93
PACSIN3-209ENST00000532457 GTF2E1P29083 439 aaPredicted RBP27.1■■□□□ 1.93
PACSIN3-209ENST00000532457 ATG9AQ7Z3C6 839 aa27.09■■□□□ 1.93
PACSIN3-209ENST00000532457 CNBD1Q8NA66 436 aa27.09■■□□□ 1.93
PACSIN3-209ENST00000532457 C3orf67Q6ZVT6 689 aa27.09■■□□□ 1.93
PACSIN3-209ENST00000532457 PUS3Q9BZE2 481 aaKnown RBP27.09■■□□□ 1.93
PACSIN3-209ENST00000532457 CCDC57Q2TAC2 916 aa27.08■■□□□ 1.93
PACSIN3-209ENST00000532457 LRRC24Q50LG9 513 aa27.08■■□□□ 1.93
PACSIN3-209ENST00000532457 DDX60Q8IY21 1712 aaKnown RBP27.08■■□□□ 1.93
PACSIN3-209ENST00000532457 ST5P78524 1137 aa27.07■■□□□ 1.92
PACSIN3-209ENST00000532457 CCDC24Q8N4L8 307 aa27.07■■□□□ 1.92
PACSIN3-209ENST00000532457 ITGA6P23229 1130 aa27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 SLC10A5Q5PT55 438 aa27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 ERC1Q8IUD2 1116 aa27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 MYH3P11055 1940 aa27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 IFIT5Q13325 482 aaKnown RBP27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 C8orf34Q49A92 452 aa27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 TSHZ3Q63HK5 1081 aa27.06■■□□□ 1.92
PACSIN3-209ENST00000532457 PDE1AP54750 535 aa27.05■■□□□ 1.92
PACSIN3-209ENST00000532457 PRR5LQ6MZQ0 368 aa27.05■■□□□ 1.92
PACSIN3-209ENST00000532457 BACH2Q9BYV9 841 aa27.05■■□□□ 1.92
PACSIN3-209ENST00000532457 ABCC12Q96J65 1359 aa27.05■■□□□ 1.92
PACSIN3-209ENST00000532457 TFCP2Q12800 502 aa27.04■■□□□ 1.92
PACSIN3-209ENST00000532457 PPP1R1BQ9UD71 204 aaPredicted RBP27.04■■□□□ 1.92
PACSIN3-209ENST00000532457 NRXN2Q9P2S2 1712 aa27.04■■□□□ 1.92
PACSIN3-209ENST00000532457 EYA2O00167 538 aa27.04■■□□□ 1.92
PACSIN3-209ENST00000532457 HSP90B1P14625 803 aaKnown RBP27.04■■□□□ 1.92
PACSIN3-209ENST00000532457 EAF2Q96CJ1 260 aaPredicted RBP27.04■■□□□ 1.92
PACSIN3-209ENST00000532457 GSPT1P15170 499 aaKnown RBP27.03■■□□□ 1.92
PACSIN3-209ENST00000532457 OSBPL3Q9H4L5 887 aa27.03■■□□□ 1.92
PACSIN3-209ENST00000532457 SEC31BQ9NQW1 1179 aa27.03■■□□□ 1.92
PACSIN3-209ENST00000532457 STAP2Q9UGK3 403 aa27.02■■□□□ 1.92
PACSIN3-209ENST00000532457 ANKRD18BA2A2Z9 1011 aa27.01■■□□□ 1.91
PACSIN3-209ENST00000532457 MX1P20591 662 aa27.01■■□□□ 1.91
PACSIN3-209ENST00000532457 CLASRPQ8N2M8 674 aaKnown RBP27.01■■□□□ 1.91
PACSIN3-209ENST00000532457 CIAO1O76071 339 aa27■■□□□ 1.91
PACSIN3-209ENST00000532457 TTC22Q5TAA0 569 aa27■■□□□ 1.91
PACSIN3-209ENST00000532457 BMP2KLQ5H9B9 411 aa27■■□□□ 1.91
PACSIN3-209ENST00000532457 BRIP1Q9BX63 1249 aa27■■□□□ 1.91
PACSIN3-209ENST00000532457 CCDC8Q9H0W5 538 aaPredicted RBP27■■□□□ 1.91
PACSIN3-209ENST00000532457 LAMB2P55268 1798 aa26.99■■□□□ 1.91
PACSIN3-209ENST00000532457 IL15P40933 162 aaPredicted RBP26.99■■□□□ 1.91
PACSIN3-209ENST00000532457 SF3B3Q15393 1217 aaKnown RBP26.99■■□□□ 1.91
PACSIN3-209ENST00000532457 AACSQ86V21 672 aa26.99■■□□□ 1.91
PACSIN3-209ENST00000532457 RIPOR2Q9Y4F9 1068 aa26.99■■□□□ 1.91
PACSIN3-209ENST00000532457 CCDC152Q4G0S7 254 aa26.98■■□□□ 1.91
PACSIN3-209ENST00000532457 TAF7LQ5H9L4 462 aa26.98■■□□□ 1.91
PACSIN3-209ENST00000532457 TLR7Q9NYK1 1049 aaKnown RBP26.98■■□□□ 1.91
PACSIN3-209ENST00000532457 CD2APQ9Y5K6 639 aa26.98■■□□□ 1.91
PACSIN3-209ENST00000532457 LRP5O75197 1615 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 PDE6BP35913 854 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 C10orf71Q711Q0 1435 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 COL4A1P02462 1669 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 TNNI3KQ59H18 835 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 LDHAL6AQ6ZMR3 332 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 FPGT-TNNI3KV9GXZ4 949 aa26.97■■□□□ 1.91
PACSIN3-209ENST00000532457 KLHL34Q8N239 644 aa26.96■■□□□ 1.91
PACSIN3-209ENST00000532457 NLRP3Q96P20 1036 aa26.96■■□□□ 1.91
PACSIN3-209ENST00000532457 FBXO3Q9UK99 471 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms