RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 MRS2Q9HD23 443 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 GJA3Q9Y6H8 435 aa21.31■■□□□ 1
CAVIN3-204ENST00000532354 NCBP3Q53F19 620 aaKnown RBP21.3■■□□□ 1
CAVIN3-204ENST00000532354 DPP8Q6V1X1 898 aaPredicted RBP21.3■■□□□ 1
CAVIN3-204ENST00000532354 NIM1KQ8IY84 436 aa21.3■■□□□ 1
CAVIN3-204ENST00000532354 SUPT20HQ8NEM7 779 aa21.3■■□□□ 1
CAVIN3-204ENST00000532354 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
CAVIN3-204ENST00000532354 IRS4O14654 1257 aaPredicted RBP21.29■■□□□ 1
CAVIN3-204ENST00000532354 TMC4Q7Z404 712 aa21.29■■□□□ 1
CAVIN3-204ENST00000532354 PNMA8AQ86V59 439 aaPredicted RBP21.29■■□□□ 1
CAVIN3-204ENST00000532354 MYD88Q99836 296 aa21.29■■□□□ 1
CAVIN3-204ENST00000532354 ITGBL1O95965 494 aaPredicted RBP21.28■■□□□ 1
CAVIN3-204ENST00000532354 ZBTB38Q8NAP3 1195 aaPredicted RBP21.28■■□□□ 1
CAVIN3-204ENST00000532354 CELF1Q92879 486 aaKnown RBP21.28■■□□□ 1
CAVIN3-204ENST00000532354 CLEC11AQ9Y240 323 aa21.28■■□□□ 1
CAVIN3-204ENST00000532354 TAF1P21675 1872 aa21.28■■□□□ 1
CAVIN3-204ENST00000532354 PASKQ96RG2 1323 aa21.28■■□□□ 1
CAVIN3-204ENST00000532354 SCNN1DP51172 638 aa21.27■■□□□ 1
CAVIN3-204ENST00000532354 CCDC191Q8NCU4 936 aa21.27■■□□□ 1
CAVIN3-204ENST00000532354 METTL22Q9BUU2 404 aaPredicted RBP21.27■■□□□ 1
CAVIN3-204ENST00000532354 CREBZFQ9NS37 354 aa21.27■■□□□ 1
CAVIN3-204ENST00000532354 ZNRF3Q9ULT6 936 aa21.27■■□□□ 1
CAVIN3-204ENST00000532354 IL16Q14005 1332 aa21.27■□□□□ 0.99
CAVIN3-204ENST00000532354 DDX58O95786 925 aaKnown RBP21.26■□□□□ 0.99
CAVIN3-204ENST00000532354 EPS15P42566 896 aa21.26■□□□□ 0.99
CAVIN3-204ENST00000532354 KIAA2012Q0VF49 1180 aa21.26■□□□□ 0.99
CAVIN3-204ENST00000532354 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
CAVIN3-204ENST00000532354 LMOD1P29536 600 aaPredicted RBP21.25■□□□□ 0.99
CAVIN3-204ENST00000532354 CXCL9Q07325 125 aa21.25■□□□□ 0.99
CAVIN3-204ENST00000532354 PCCAP05165 728 aaPredicted RBP21.24■□□□□ 0.99
CAVIN3-204ENST00000532354 TWISTNBQ3B726 338 aaPredicted RBP21.24■□□□□ 0.99
CAVIN3-204ENST00000532354 CWC25Q9NXE8 425 aaPredicted RBP21.24■□□□□ 0.99
CAVIN3-204ENST00000532354 MAP3K2Q9Y2U5 619 aa21.24■□□□□ 0.99
CAVIN3-204ENST00000532354 LTBP1Q14766 1721 aa21.24■□□□□ 0.99
CAVIN3-204ENST00000532354 HSP90B1P14625 803 aaKnown RBP21.23■□□□□ 0.99
CAVIN3-204ENST00000532354 MAP1SQ66K74 1059 aaPredicted RBP21.23■□□□□ 0.99
CAVIN3-204ENST00000532354 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
CAVIN3-204ENST00000532354 CNTROBQ8N137 903 aa21.23■□□□□ 0.99
CAVIN3-204ENST00000532354 COL4A1P02462 1669 aa21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 PI4KAP2A4QPH2 592 aa21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 RPS8P62241 208 aaKnown RBP21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 PI4KAP1Q8N8J0 262 aa21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 JARID2Q92833 1246 aaPredicted RBP21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 STK31Q9BXU1 1019 aa21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 NSFL1CQ9UNZ2 370 aaKnown RBP21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 SALL2Q9Y467 1007 aaPredicted RBP21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 DUOX1Q9NRD9 1551 aa21.22■□□□□ 0.99
CAVIN3-204ENST00000532354 LRRC37AA6NMS7 1700 aa21.21■□□□□ 0.99
CAVIN3-204ENST00000532354 PDE8AO60658 829 aa21.21■□□□□ 0.99
CAVIN3-204ENST00000532354 GPSM2P81274 684 aa21.21■□□□□ 0.99
CAVIN3-204ENST00000532354 SEC31BQ9NQW1 1179 aa21.21■□□□□ 0.99
CAVIN3-204ENST00000532354 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 IGKV5-2P06315 115 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 CIAPIN1Q6FI81 312 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 USP50Q70EL3 339 aaPredicted RBP21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 G2E3Q7L622 706 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 WDR63Q8IWG1 891 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 GPRC5DQ9NZD1 345 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 POLLQ9UGP5 575 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 MKRN1Q9UHC7 482 aaKnown RBP21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 PCNTO95613 3336 aa21.2■□□□□ 0.98
CAVIN3-204ENST00000532354 TMEM88BA6NKF7 163 aa21.19■□□□□ 0.98
CAVIN3-204ENST00000532354 YDJCA8MPS7 323 aa21.19■□□□□ 0.98
CAVIN3-204ENST00000532354 RAD17O75943 681 aa21.19■□□□□ 0.98
CAVIN3-204ENST00000532354 TNIP1Q15025 636 aa21.19■□□□□ 0.98
CAVIN3-204ENST00000532354 WASHC4Q2M389 1173 aa21.19■□□□□ 0.98
CAVIN3-204ENST00000532354 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
CAVIN3-204ENST00000532354 GMPSP49915 693 aaPredicted RBP21.18■□□□□ 0.98
CAVIN3-204ENST00000532354 CCDC152Q4G0S7 254 aa21.18■□□□□ 0.98
CAVIN3-204ENST00000532354 ADARB2Q9NS39 739 aaKnown RBP21.18■□□□□ 0.98
CAVIN3-204ENST00000532354 C6orf229H3BNL8 230 aa21.17■□□□□ 0.98
CAVIN3-204ENST00000532354 CDHR2Q9BYE9 1310 aa21.17■□□□□ 0.98
CAVIN3-204ENST00000532354 CNTNAP1P78357 1384 aa21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 RIMBP2O15034 1052 aa21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 VAMP4O75379 141 aa21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 NEXNQ0ZGT2 675 aa21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 TBC1D16Q8TBP0 767 aa21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 CCDC85AQ96PX6 553 aaPredicted RBP21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
CAVIN3-204ENST00000532354 CWF19L2Q2TBE0 894 aaKnown RBP21.15■□□□□ 0.98
CAVIN3-204ENST00000532354 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
CAVIN3-204ENST00000532354 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
CAVIN3-204ENST00000532354 DBNDD1Q9H9R9 158 aa21.15■□□□□ 0.98
CAVIN3-204ENST00000532354 NEURL1BA8MQ27 555 aa21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 HSPA1AP0DMV8 641 aaKnown RBP21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 HSPA1BP0DMV9 641 aaKnown RBP21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 EXOSC9Q06265 439 aaKnown RBP21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 FLIIQ13045 1269 aa21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 COL13A1Q5TAT6 717 aaPredicted RBP21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 EYA3Q99504 573 aa21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 SPINK5Q9NQ38 1064 aaPredicted RBP21.14■□□□□ 0.97
CAVIN3-204ENST00000532354 CTSWP56202 376 aa21.13■□□□□ 0.97
CAVIN3-204ENST00000532354 FMR1Q06787 632 aaKnown RBP eCLIP21.13■□□□□ 0.97
CAVIN3-204ENST00000532354 DOK7Q18PE1 504 aa21.13■□□□□ 0.97
CAVIN3-204ENST00000532354 TTLL11Q8NHH1 800 aa21.13■□□□□ 0.97
CAVIN3-204ENST00000532354 GPR101Q96P66 508 aaPredicted RBP21.13■□□□□ 0.97
CAVIN3-204ENST00000532354 H7C1W4 665 aa21.12■□□□□ 0.97
CAVIN3-204ENST00000532354 PSMD14O00487 310 aa21.12■□□□□ 0.97
CAVIN3-204ENST00000532354 HIRAP54198 1017 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms