RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MFSD10Q14728 455 aa15.83■□□□□ 0.12
COPB1-208ENST00000532088 PARP10Q53GL7 1025 aa15.83■□□□□ 0.12
COPB1-208ENST00000532088 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
COPB1-208ENST00000532088 INTS3Q68E01 1043 aaKnown RBP15.83■□□□□ 0.12
COPB1-208ENST00000532088 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
COPB1-208ENST00000532088 FTSJ3Q8IY81 847 aaKnown RBP15.83■□□□□ 0.12
COPB1-208ENST00000532088 ZNF34Q8IZ26 560 aa15.83■□□□□ 0.12
COPB1-208ENST00000532088 LARP6Q9BRS8 491 aaKnown RBP15.83■□□□□ 0.12
COPB1-208ENST00000532088 F6X3S4 739 aa15.82■□□□□ 0.12
COPB1-208ENST00000532088 KIF3CO14782 793 aa15.82■□□□□ 0.12
COPB1-208ENST00000532088 TMEM92Q6UXU6 159 aa15.82■□□□□ 0.12
COPB1-208ENST00000532088 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
COPB1-208ENST00000532088 SRCIN1Q9C0H9 1055 aa15.82■□□□□ 0.12
COPB1-208ENST00000532088 SUPT16HQ9Y5B9 1047 aaKnown RBP15.82■□□□□ 0.12
COPB1-208ENST00000532088 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
COPB1-208ENST00000532088 R3HDM1Q15032 1099 aaKnown RBP15.81■□□□□ 0.12
COPB1-208ENST00000532088 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
COPB1-208ENST00000532088 MYD88Q99836 296 aa15.81■□□□□ 0.12
COPB1-208ENST00000532088 WDR70Q9NW82 654 aa15.81■□□□□ 0.12
COPB1-208ENST00000532088 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
COPB1-208ENST00000532088 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
COPB1-208ENST00000532088 IGKV5-2P06315 115 aa15.8■□□□□ 0.12
COPB1-208ENST00000532088 TM4SF1P30408 202 aa15.8■□□□□ 0.12
COPB1-208ENST00000532088 SLC4A10Q6U841 1118 aa15.8■□□□□ 0.12
COPB1-208ENST00000532088 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
COPB1-208ENST00000532088 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.8■□□□□ 0.12
COPB1-208ENST00000532088 C2orf72A6NCS6 295 aa15.79■□□□□ 0.12
COPB1-208ENST00000532088 PLIN1O60240 522 aa15.79■□□□□ 0.12
COPB1-208ENST00000532088 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
COPB1-208ENST00000532088 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
COPB1-208ENST00000532088 NLRP10Q86W26 655 aa15.79■□□□□ 0.12
COPB1-208ENST00000532088 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
COPB1-208ENST00000532088 CHMP4BQ9H444 224 aaKnown RBP15.79■□□□□ 0.12
COPB1-208ENST00000532088 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
COPB1-208ENST00000532088 NIP7Q9Y221 180 aaKnown RBP eCLIP15.79■□□□□ 0.12
COPB1-208ENST00000532088 UBN2Q6ZU65 1347 aa15.78■□□□□ 0.12
COPB1-208ENST00000532088 RLBP1P12271 317 aa15.78■□□□□ 0.12
COPB1-208ENST00000532088 MVPQ14764 893 aaKnown RBP15.78■□□□□ 0.12
COPB1-208ENST00000532088 NFIXQ14938 502 aa15.78■□□□□ 0.12
COPB1-208ENST00000532088 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
COPB1-208ENST00000532088 CLUAP1Q96AJ1 413 aa15.78■□□□□ 0.12
COPB1-208ENST00000532088 NYXQ9GZU5 481 aa15.78■□□□□ 0.12
COPB1-208ENST00000532088 UTYO14607 1347 aa15.77■□□□□ 0.12
COPB1-208ENST00000532088 GCKRQ14397 625 aa15.77■□□□□ 0.12
COPB1-208ENST00000532088 DDX27Q96GQ7 796 aaKnown RBP15.77■□□□□ 0.12
COPB1-208ENST00000532088 DDX19BQ9UMR2 479 aa15.77■□□□□ 0.12
COPB1-208ENST00000532088 HDAC5Q9UQL6 1122 aa15.77■□□□□ 0.12
COPB1-208ENST00000532088 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
COPB1-208ENST00000532088 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
COPB1-208ENST00000532088 ATP5J2-PTCD1G3V325 749 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 PCCAP05165 728 aaPredicted RBP15.76■□□□□ 0.11
COPB1-208ENST00000532088 AAMPQ13685 434 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 CWF19L2Q2TBE0 894 aaKnown RBP15.76■□□□□ 0.11
COPB1-208ENST00000532088 LHX8Q68G74 356 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 MAMSTRQ6ZN01 415 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
COPB1-208ENST00000532088 PANK1Q8TE04 598 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
COPB1-208ENST00000532088 NRXN2Q9P2S2 1712 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
COPB1-208ENST00000532088 CDHR2Q9BYE9 1310 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 H7C1W4 665 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
COPB1-208ENST00000532088 NTSR2O95665 410 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
COPB1-208ENST00000532088 GPTP24298 496 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 FOXK1P85037 733 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 ITPRIPQ8IWB1 547 aa15.75■□□□□ 0.11
COPB1-208ENST00000532088 PDGFDQ9GZP0 370 aaPredicted RBP15.75■□□□□ 0.11
COPB1-208ENST00000532088 GRM8O00222 908 aa15.74■□□□□ 0.11
COPB1-208ENST00000532088 GNAI3P08754 354 aa15.74■□□□□ 0.11
COPB1-208ENST00000532088 C20orf194Q5TEA3 1177 aa15.74■□□□□ 0.11
COPB1-208ENST00000532088 PARP3Q9Y6F1 533 aa15.74■□□□□ 0.11
COPB1-208ENST00000532088 SH3TC1Q8TE82 1336 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 PSDA5PKW4 1024 aaPredicted RBP15.73■□□□□ 0.11
COPB1-208ENST00000532088 ZBTB7BO15156 539 aaPredicted RBP15.73■□□□□ 0.11
COPB1-208ENST00000532088 SERPINB2P05120 415 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 MMP10P09238 476 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 DDR1Q08345 913 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 DSG2Q14126 1118 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 BICDL1Q6ZP65 573 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
COPB1-208ENST00000532088 TRMT112Q9UI30 125 aaKnown RBP15.73■□□□□ 0.11
COPB1-208ENST00000532088 COG6Q9Y2V7 657 aa15.73■□□□□ 0.11
COPB1-208ENST00000532088 POLD1P28340 1107 aa15.72■□□□□ 0.11
COPB1-208ENST00000532088 CASP7P55210 303 aa15.72■□□□□ 0.11
COPB1-208ENST00000532088 SLC10A5Q5PT55 438 aa15.72■□□□□ 0.11
COPB1-208ENST00000532088 PPP1R15BQ5SWA1 713 aa15.72■□□□□ 0.11
COPB1-208ENST00000532088 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
COPB1-208ENST00000532088 PLA2G12BQ9BX93 195 aa15.72■□□□□ 0.11
COPB1-208ENST00000532088 SCUBE2Q9NQ36 999 aa15.72■□□□□ 0.11
COPB1-208ENST00000532088 MSL1Q68DK7 614 aa15.71■□□□□ 0.11
COPB1-208ENST00000532088 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
COPB1-208ENST00000532088 LAMB2P55268 1798 aa15.71■□□□□ 0.11
COPB1-208ENST00000532088 ZBTB7AO95365 584 aa15.7■□□□□ 0.1
COPB1-208ENST00000532088 UBTFL1P0CB47 393 aaPredicted RBP15.7■□□□□ 0.1
COPB1-208ENST00000532088 ST5P78524 1137 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms