RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
GPATCH4-216ENST00000531900 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
GPATCH4-216ENST00000531900 H7C1W4 665 aa13.79□□□□□ -0.2
GPATCH4-216ENST00000531900 MRPL50Q8N5N7 158 aaKnown RBP13.79□□□□□ -0.2
GPATCH4-216ENST00000531900 SMC1BQ8NDV3 1235 aa13.79□□□□□ -0.2
GPATCH4-216ENST00000531900 MYH3P11055 1940 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 GCKRQ14397 625 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 BEND3Q5T5X7 828 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 PSMD1Q99460 953 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 ABCC4O15439 1325 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 PTPRCP08575 1304 aa13.78□□□□□ -0.2
GPATCH4-216ENST00000531900 PDE8AO60658 829 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 TAF1P21675 1872 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 CASP7P55210 303 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 GRAPQ13588 217 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 GRAPLQ8TC17 118 aaPredicted RBP13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.21
GPATCH4-216ENST00000531900 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPATCH4-216ENST00000531900 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPATCH4-216ENST00000531900 RTL9Q8NET4 1388 aa13.75□□□□□ -0.21
GPATCH4-216ENST00000531900 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
GPATCH4-216ENST00000531900 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
GPATCH4-216ENST00000531900 RTFDC1Q9BY42 306 aaPredicted RBP13.75□□□□□ -0.21
GPATCH4-216ENST00000531900 VPS33BQ9H267 617 aa13.75□□□□□ -0.21
GPATCH4-216ENST00000531900 LRRC37AA6NMS7 1700 aa13.75□□□□□ -0.21
GPATCH4-216ENST00000531900 F6X3S4 739 aa13.74□□□□□ -0.21
GPATCH4-216ENST00000531900 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
GPATCH4-216ENST00000531900 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
GPATCH4-216ENST00000531900 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
GPATCH4-216ENST00000531900 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
GPATCH4-216ENST00000531900 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
GPATCH4-216ENST00000531900 TIAM2Q8IVF5 1701 aa13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 DDNO94850 711 aaPredicted RBP13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 CSF1RP07333 972 aa13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 RPS8P62241 208 aaKnown RBP13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 CELF1Q92879 486 aaKnown RBP13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 ZNF277Q9NRM2 450 aaPredicted RBP13.73□□□□□ -0.21
GPATCH4-216ENST00000531900 UTYO14607 1347 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 POTECB2RU33 542 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 CTSWP56202 376 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 DNAJC5GQ8N7S2 189 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 SRCIN1Q9C0H9 1055 aa13.72□□□□□ -0.21
GPATCH4-216ENST00000531900 GRM8O00222 908 aa13.71□□□□□ -0.21
GPATCH4-216ENST00000531900 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.21
GPATCH4-216ENST00000531900 JDP2Q8WYK2 163 aa13.71□□□□□ -0.21
GPATCH4-216ENST00000531900 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.21
GPATCH4-216ENST00000531900 SMC4Q9NTJ3 1288 aa13.71□□□□□ -0.21
GPATCH4-216ENST00000531900 COL4A1P02462 1669 aa13.71□□□□□ -0.21
GPATCH4-216ENST00000531900 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
GPATCH4-216ENST00000531900 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
GPATCH4-216ENST00000531900 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
GPATCH4-216ENST00000531900 SEC31BQ9NQW1 1179 aa13.7□□□□□ -0.22
GPATCH4-216ENST00000531900 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
GPATCH4-216ENST00000531900 FZD9O00144 591 aa13.69□□□□□ -0.22
GPATCH4-216ENST00000531900 FOXO4P98177 505 aa13.69□□□□□ -0.22
GPATCH4-216ENST00000531900 MPNDQ8N594 471 aa13.69□□□□□ -0.22
GPATCH4-216ENST00000531900 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
GPATCH4-216ENST00000531900 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
GPATCH4-216ENST00000531900 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 HTRA3P83110 453 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 SLC51AQ86UW1 340 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 GREM2Q9H772 168 aa13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 BSDC1Q9NW68 430 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 C9orf78Q9NZ63 289 aaPredicted RBP13.68□□□□□ -0.22
GPATCH4-216ENST00000531900 KIF16BQ96L93 1317 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 ANKRD18AQ8IVF6 992 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 KAZALD1Q96I82 304 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 HACL1Q9UJ83 578 aa13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 NOB1Q9ULX3 412 aaKnown RBP13.67□□□□□ -0.22
GPATCH4-216ENST00000531900 ZNF541Q9H0D2 1346 aa13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 COL4A5P29400 1685 aa13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 NBPF7P0C2Y1 421 aaPredicted RBP13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 CCT4P50991 539 aaKnown RBP13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 GPC2Q8N158 579 aa13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 TAF1DQ9H5J8 278 aaPredicted RBP13.66□□□□□ -0.22
GPATCH4-216ENST00000531900 SCN4AP35499 1836 aa13.65□□□□□ -0.22
GPATCH4-216ENST00000531900 IPO8O15397 1037 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms