RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
USF1-210ENST00000531842 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
USF1-210ENST00000531842 KCNQ5Q9NR82 932 aa11.93□□□□□ -0.5
USF1-210ENST00000531842 ZNRF3Q9ULT6 936 aa11.93□□□□□ -0.5
USF1-210ENST00000531842 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
USF1-210ENST00000531842 ASTN2O75129 1339 aaPredicted RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
USF1-210ENST00000531842 ADM5C9JUS6 153 aa11.92□□□□□ -0.5
USF1-210ENST00000531842 RGL2O15211 777 aa11.92□□□□□ -0.5
USF1-210ENST00000531842 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 HUNKP57058 714 aa11.92□□□□□ -0.5
USF1-210ENST00000531842 TBC1D10BQ4KMP7 808 aaPredicted RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
USF1-210ENST00000531842 PGAP2Q9UHJ9 254 aa11.92□□□□□ -0.5
USF1-210ENST00000531842 CNOT7Q9UIV1 285 aaKnown RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
USF1-210ENST00000531842 FAM155AB1AL88 458 aaPredicted RBP11.91□□□□□ -0.5
USF1-210ENST00000531842 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
USF1-210ENST00000531842 PDIA6Q15084 440 aa11.91□□□□□ -0.5
USF1-210ENST00000531842 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
USF1-210ENST00000531842 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
USF1-210ENST00000531842 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
USF1-210ENST00000531842 NUDCQ9Y266 331 aa11.91□□□□□ -0.5
USF1-210ENST00000531842 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
USF1-210ENST00000531842 HTATSF1O43719 755 aaKnown RBP11.9□□□□□ -0.5
USF1-210ENST00000531842 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
USF1-210ENST00000531842 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.5
USF1-210ENST00000531842 MPNDQ8N594 471 aa11.9□□□□□ -0.5
USF1-210ENST00000531842 UTP14AQ9BVJ6 771 aaKnown RBP11.9□□□□□ -0.5
USF1-210ENST00000531842 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
USF1-210ENST00000531842 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
USF1-210ENST00000531842 SCAF8Q9UPN6 1271 aaKnown RBP11.9□□□□□ -0.5
USF1-210ENST00000531842 PSMD14O00487 310 aa11.89□□□□□ -0.51
USF1-210ENST00000531842 TRPA1O75762 1119 aa11.89□□□□□ -0.51
USF1-210ENST00000531842 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
USF1-210ENST00000531842 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
USF1-210ENST00000531842 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
USF1-210ENST00000531842 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
USF1-210ENST00000531842 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
USF1-210ENST00000531842 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
USF1-210ENST00000531842 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
USF1-210ENST00000531842 PLEKHF1Q96S99 279 aa11.88□□□□□ -0.51
USF1-210ENST00000531842 RNF186Q9NXI6 227 aa11.88□□□□□ -0.51
USF1-210ENST00000531842 CA12O43570 354 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 NOGQ13253 232 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 GRIPAP1Q4V328 841 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 RTL5Q5HYW3 569 aaPredicted RBP11.87□□□□□ -0.51
USF1-210ENST00000531842 KRT26Q7Z3Y9 468 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
USF1-210ENST00000531842 HHIPL1Q96JK4 782 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 GBA2Q9HCG7 927 aaPredicted RBP11.87□□□□□ -0.51
USF1-210ENST00000531842 RTL9Q8NET4 1388 aa11.87□□□□□ -0.51
USF1-210ENST00000531842 H7C1D1 291 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 ZNF157P51786 506 aaPredicted RBP11.86□□□□□ -0.51
USF1-210ENST00000531842 TNIP1Q15025 636 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 PARP10Q53GL7 1025 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 RGMBQ6NW40 437 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 MOB2Q70IA6 237 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
USF1-210ENST00000531842 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
USF1-210ENST00000531842 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
USF1-210ENST00000531842 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
USF1-210ENST00000531842 GPSM2P81274 684 aa11.85□□□□□ -0.51
USF1-210ENST00000531842 GRAPQ13588 217 aa11.85□□□□□ -0.51
USF1-210ENST00000531842 NFE2L2Q16236 605 aa11.85□□□□□ -0.51
USF1-210ENST00000531842 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
USF1-210ENST00000531842 GRAPLQ8TC17 118 aaPredicted RBP11.85□□□□□ -0.51
USF1-210ENST00000531842 PNISRQ8TF01 805 aaKnown RBP11.85□□□□□ -0.51
USF1-210ENST00000531842 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
USF1-210ENST00000531842 SPEF2Q9C093 1822 aa11.85□□□□□ -0.51
USF1-210ENST00000531842 BBOX1O75936 387 aa11.84□□□□□ -0.51
USF1-210ENST00000531842 CSRNP1Q96S65 589 aa11.84□□□□□ -0.51
USF1-210ENST00000531842 VPS33BQ9H267 617 aa11.84□□□□□ -0.51
USF1-210ENST00000531842 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
USF1-210ENST00000531842 NSFL1CQ9UNZ2 370 aaKnown RBP11.84□□□□□ -0.51
USF1-210ENST00000531842 CDHR2Q9BYE9 1310 aa11.84□□□□□ -0.51
USF1-210ENST00000531842 PSME4Q14997 1843 aa11.83□□□□□ -0.51
USF1-210ENST00000531842 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 ECE2O60344 883 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 PRAMEF18Q5VWM3 479 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
USF1-210ENST00000531842 ZNF646O15015 1829 aaPredicted RBP11.82□□□□□ -0.52
USF1-210ENST00000531842 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
USF1-210ENST00000531842 SLC10A3P09131 477 aa11.82□□□□□ -0.52
USF1-210ENST00000531842 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
USF1-210ENST00000531842 KIF4BQ2VIQ3 1234 aa11.82□□□□□ -0.52
USF1-210ENST00000531842 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
USF1-210ENST00000531842 CDCA5Q96FF9 252 aa11.82□□□□□ -0.52
USF1-210ENST00000531842 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
USF1-210ENST00000531842 MKI67P46013 3256 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms