RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 TFCP2Q12800 502 aa11.69□□□□□ -0.54
NPIPA3-202ENST00000531598 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
NPIPA3-202ENST00000531598 ARXQ96QS3 562 aa11.69□□□□□ -0.54
NPIPA3-202ENST00000531598 TJP1Q07157 1748 aa11.69□□□□□ -0.54
NPIPA3-202ENST00000531598 RREB1Q92766 1687 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 ONECUT3O60422 494 aaPredicted RBP11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 HSPA4P34932 840 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 CTSWP56202 376 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 TSHZ3Q63HK5 1081 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 INTS5Q6P9B9 1019 aaKnown RBP11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 HAUS7Q99871 368 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
NPIPA3-202ENST00000531598 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 IRS4O14654 1257 aaPredicted RBP11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 ZKSCAN1P17029 563 aaPredicted RBP11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 ATG9AQ7Z3C6 839 aa11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
NPIPA3-202ENST00000531598 THSD7AQ9UPZ6 1657 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 PSMA5P28066 241 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 NUCB2P80303 420 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 TM6SF1Q9BZW5 370 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 HMG20BQ9P0W2 317 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 DBNLQ9UJU6 430 aaKnown RBP11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 ZNF609O15014 1411 aa11.66□□□□□ -0.54
NPIPA3-202ENST00000531598 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 A0A0G2JS52 829 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 ZFYP08048 801 aaPredicted RBP11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 KRT32Q14532 448 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 NFKBIBQ15653 356 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 HLFQ16534 295 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 KCNB2Q92953 911 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 FAM89AQ96GI7 184 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 INTS4Q96HW7 963 aaKnown RBP11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 NYXQ9GZU5 481 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 BOLA2Q9H3K6 86 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 ATRNO75882 1429 aa11.65□□□□□ -0.54
NPIPA3-202ENST00000531598 DDX11L8A8MPP1 907 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 ZSCAN25Q6NSZ9 544 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 GBP4Q96PP9 640 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 HELLSQ9NRZ9 838 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 ANKRD36CQ5JPF3 1778 aa11.64□□□□□ -0.55
NPIPA3-202ENST00000531598 CCDC171Q6TFL3 1326 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 A0A1B0GUL7 405 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 RPS6KA4O75676 772 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 UQCRFS1P1P0C7P4 283 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 ITGA6P23229 1130 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 GPTP24298 496 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 DDIT3P35638 169 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 ITPK1Q13572 414 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 DBNDD2Q9BQY9 259 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 TBC1D2BQ9UPU7 963 aa11.63□□□□□ -0.55
NPIPA3-202ENST00000531598 AFF2P51816 1311 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 NHSQ6T4R5 1651 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 GOLGA6L22H0YM25 854 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 MAP4K4O95819 1239 aaPredicted RBP11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 IFIT1P09914 478 aaKnown RBP11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 SSFA2P28290 1259 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 KCNJ4P48050 445 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 NEK4P51957 841 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 NBR1Q14596 966 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 ANKRD1Q15327 319 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 TSGA10IPQ3SY00 556 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 MCMDC2Q4G0Z9 681 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 TTC39AQ5SRH9 613 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 MAP4K1Q92918 833 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 NIP7Q9Y221 180 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 RIPOR2Q9Y4F9 1068 aa11.62□□□□□ -0.55
NPIPA3-202ENST00000531598 MED23Q9ULK4 1368 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms