RNA–Protein interactions for RNA: ENST00000531333.5

CASP4-209, Transcript of caspase 4, humanhuman

TSL 4

Gene CASP4, Length 667 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-209ENST00000531333 PTK7Q13308 1070 aa10.79□□□□□ -0.68
CASP4-209ENST00000531333 CRTC2Q53ET0 693 aaPredicted RBP10.79□□□□□ -0.68
CASP4-209ENST00000531333 IGF2-ASQ6U949 168 aa10.79□□□□□ -0.68
CASP4-209ENST00000531333 MEGF10Q96KG7 1140 aa10.79□□□□□ -0.68
CASP4-209ENST00000531333 RNF112Q9ULX5 631 aa10.79□□□□□ -0.68
CASP4-209ENST00000531333 DEAF1O75398 565 aaPredicted RBP10.78□□□□□ -0.68
CASP4-209ENST00000531333 GPLD1P80108 840 aa10.78□□□□□ -0.68
CASP4-209ENST00000531333 ELMSAN1Q6PJG2 1045 aa10.78□□□□□ -0.68
CASP4-209ENST00000531333 KRT25Q7Z3Z0 450 aa10.78□□□□□ -0.68
CASP4-209ENST00000531333 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
CASP4-209ENST00000531333 MLLT1Q03111 559 aaPredicted RBP10.77□□□□□ -0.69
CASP4-209ENST00000531333 DPYDQ12882 1025 aa10.77□□□□□ -0.69
CASP4-209ENST00000531333 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
CASP4-209ENST00000531333 GLMNQ92990 594 aa10.77□□□□□ -0.69
CASP4-209ENST00000531333 ARSDP51689 593 aa10.76□□□□□ -0.69
CASP4-209ENST00000531333 KANK4Q5T7N3 995 aaPredicted RBP10.76□□□□□ -0.69
CASP4-209ENST00000531333 QTRT2Q9H974 415 aaKnown RBP10.76□□□□□ -0.69
CASP4-209ENST00000531333 DLL1O00548 723 aa10.75□□□□□ -0.69
CASP4-209ENST00000531333 SASH3O75995 380 aa10.75□□□□□ -0.69
CASP4-209ENST00000531333 DGKZQ13574 1117 aa10.75□□□□□ -0.69
CASP4-209ENST00000531333 FNBP4Q8N3X1 1017 aaPredicted RBP10.75□□□□□ -0.69
CASP4-209ENST00000531333 MICAL2O94851 1124 aa10.74□□□□□ -0.69
CASP4-209ENST00000531333 RARAP10276 462 aa10.74□□□□□ -0.69
CASP4-209ENST00000531333 PRR23CQ6ZRP0 262 aa10.74□□□□□ -0.69
CASP4-209ENST00000531333 SMG9Q9H0W8 520 aaKnown RBP10.74□□□□□ -0.69
CASP4-209ENST00000531333 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
CASP4-209ENST00000531333 NRLP54845 237 aa10.72□□□□□ -0.69
CASP4-209ENST00000531333 KRTAP19-1Q8IUB9 90 aa10.72□□□□□ -0.69
CASP4-209ENST00000531333 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
CASP4-209ENST00000531333 FAM196BA6NMK8 535 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L15C9J2P7 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L12C9JPN9 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L11C9JVI0 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L21D6R901 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L18D6R9N7 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L22D6RA61 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L19D6RCP7 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L20D6RJB6 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 OPLAHO14841 1288 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 EGFRP00533 1210 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 WEE1P30291 646 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 USP17L24Q0WX57 530 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 HFE2Q6ZVN8 426 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 MYO19Q96H55 970 aa10.71□□□□□ -0.69
CASP4-209ENST00000531333 C11orf91Q3C1V1 193 aa10.7□□□□□ -0.7
CASP4-209ENST00000531333 ARXQ96QS3 562 aa10.7□□□□□ -0.7
CASP4-209ENST00000531333 PPP1R12CQ9BZL4 782 aa10.7□□□□□ -0.7
CASP4-209ENST00000531333 AKTIPQ9H8T0 292 aa10.7□□□□□ -0.7
CASP4-209ENST00000531333 TLR7Q9NYK1 1049 aaKnown RBP10.7□□□□□ -0.7
CASP4-209ENST00000531333 FOXO3O43524 673 aa10.69□□□□□ -0.7
CASP4-209ENST00000531333 TMEM130Q8N3G9 435 aa10.69□□□□□ -0.7
CASP4-209ENST00000531333 CLUAP1Q96AJ1 413 aa10.69□□□□□ -0.7
CASP4-209ENST00000531333 RTCBQ9Y3I0 505 aaKnown RBP10.69□□□□□ -0.7
CASP4-209ENST00000531333 EIF2AK2P19525 551 aaKnown RBP10.68□□□□□ -0.7
CASP4-209ENST00000531333 ARID4AP29374 1257 aaPredicted RBP10.68□□□□□ -0.7
CASP4-209ENST00000531333 SLC51AQ86UW1 340 aa10.68□□□□□ -0.7
CASP4-209ENST00000531333 USP20Q9Y2K6 914 aa10.68□□□□□ -0.7
CASP4-209ENST00000531333 ALX3O95076 343 aa10.67□□□□□ -0.7
CASP4-209ENST00000531333 PROSER2Q86WR7 435 aaPredicted RBP10.67□□□□□ -0.7
CASP4-209ENST00000531333 PLD4Q96BZ4 506 aa10.67□□□□□ -0.7
CASP4-209ENST00000531333 LRFN2Q9ULH4 789 aa10.67□□□□□ -0.7
CASP4-209ENST00000531333 F8W735 103 aaPredicted RBP10.66□□□□□ -0.7
CASP4-209ENST00000531333 FSTP19883 344 aa10.66□□□□□ -0.7
CASP4-209ENST00000531333 MRPL18Q9H0U6 180 aaKnown RBP10.66□□□□□ -0.7
CASP4-209ENST00000531333 LOC102724428A0A0B4J2F2 783 aa10.65□□□□□ -0.7
CASP4-209ENST00000531333 J3QW42 95 aa10.65□□□□□ -0.7
CASP4-209ENST00000531333 XYLBO75191 536 aa10.65□□□□□ -0.7
CASP4-209ENST00000531333 SIK1P57059 783 aa10.65□□□□□ -0.7
CASP4-209ENST00000531333 MCTP1Q6DN14 999 aa10.65□□□□□ -0.7
CASP4-209ENST00000531333 VRTNQ9H8Y1 702 aa10.65□□□□□ -0.7
CASP4-209ENST00000531333 HOXD8P13378 290 aaPredicted RBP10.64□□□□□ -0.71
CASP4-209ENST00000531333 Q6ZS46 218 aa10.64□□□□□ -0.71
CASP4-209ENST00000531333 KRTAP9-9Q9BYP9 154 aa10.64□□□□□ -0.71
CASP4-209ENST00000531333 KRTAP9-4Q9BYQ2 154 aa10.64□□□□□ -0.71
CASP4-209ENST00000531333 MMP20O60882 483 aa10.63□□□□□ -0.71
CASP4-209ENST00000531333 SETDB1Q15047 1291 aa10.63□□□□□ -0.71
CASP4-209ENST00000531333 IL22RA1Q8N6P7 574 aa10.63□□□□□ -0.71
CASP4-209ENST00000531333 GOLGA2P5Q9HBQ8 144 aa10.63□□□□□ -0.71
CASP4-209ENST00000531333 SRA1Q9HD15 236 aaKnown RBP10.63□□□□□ -0.71
CASP4-209ENST00000531333 KCNMB2Q9Y691 235 aa10.63□□□□□ -0.71
CASP4-209ENST00000531333 SOX18P35713 384 aa10.62□□□□□ -0.71
CASP4-209ENST00000531333 GDF6Q6KF10 455 aaPredicted RBP10.62□□□□□ -0.71
CASP4-209ENST00000531333 TREML1Q86YW5 311 aa10.62□□□□□ -0.71
CASP4-209ENST00000531333 RGL4Q8IZJ4 473 aa10.62□□□□□ -0.71
CASP4-209ENST00000531333 CMTR1Q8N1G2 835 aaKnown RBP10.62□□□□□ -0.71
CASP4-209ENST00000531333 VTI1AQ96AJ9 217 aa10.62□□□□□ -0.71
CASP4-209ENST00000531333 PCMTD2Q9NV79 361 aa10.62□□□□□ -0.71
CASP4-209ENST00000531333 PSAPP07602 524 aa10.61□□□□□ -0.71
CASP4-209ENST00000531333 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
CASP4-209ENST00000531333 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
CASP4-209ENST00000531333 CD97P48960 835 aa10.61□□□□□ -0.71
CASP4-209ENST00000531333 CALR3Q96L12 384 aaKnown RBP10.61□□□□□ -0.71
CASP4-209ENST00000531333 NSUN5Q96P11 429 aaKnown RBP10.61□□□□□ -0.71
CASP4-209ENST00000531333 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
CASP4-209ENST00000531333 SSTR4P31391 388 aa10.59□□□□□ -0.71
CASP4-209ENST00000531333 COX20Q5RI15 118 aa10.59□□□□□ -0.71
CASP4-209ENST00000531333 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms