RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L12C9JPN9 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L21D6R901 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 INPP5BP32019 993 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 PTK7Q13308 1070 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 C11orf91Q3C1V1 193 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 PPP1R12CQ9BZL4 782 aa7.46□□□□□ -1.22
SOX6-214ENST00000531297 NRLP54845 237 aa7.45□□□□□ -1.22
SOX6-214ENST00000531297 DGKZQ13574 1117 aa7.45□□□□□ -1.22
SOX6-214ENST00000531297 SHISA2Q6UWI4 295 aa7.45□□□□□ -1.22
SOX6-214ENST00000531297 CACTIN-AS1Q8N1I8 211 aa7.45□□□□□ -1.22
SOX6-214ENST00000531297 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
SOX6-214ENST00000531297 DMGDHQ9UI17 866 aaKnown RBP7.45□□□□□ -1.22
SOX6-214ENST00000531297 NAGPAQ9UK23 515 aa7.45□□□□□ -1.22
SOX6-214ENST00000531297 PSAPP07602 524 aa7.44□□□□□ -1.22
SOX6-214ENST00000531297 MAP4K3Q8IVH8 894 aa7.44□□□□□ -1.22
SOX6-214ENST00000531297 MYO19Q96H55 970 aa7.44□□□□□ -1.22
SOX6-214ENST00000531297 MICAL2O94851 1124 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 GHRHP01286 108 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
SOX6-214ENST00000531297 PLAURQ03405 335 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 CRTC2Q53ET0 693 aaPredicted RBP7.43□□□□□ -1.22
SOX6-214ENST00000531297 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 LPIN3Q9BQK8 851 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
SOX6-214ENST00000531297 LMOD1P29536 600 aaPredicted RBP7.42□□□□□ -1.22
SOX6-214ENST00000531297 PERM1Q5SV97 790 aa7.42□□□□□ -1.22
SOX6-214ENST00000531297 FAM200AQ8TCP9 573 aa7.42□□□□□ -1.22
SOX6-214ENST00000531297 MUC3BQ9H195 1237 aa7.42□□□□□ -1.22
SOX6-214ENST00000531297 FAM13BQ9NYF5 915 aa7.42□□□□□ -1.22
SOX6-214ENST00000531297 FOXD4L6Q3SYB3 417 aaPredicted RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 KANK4Q5T7N3 995 aaPredicted RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 FOXD4L3Q6VB84 417 aaPredicted RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 FNBP4Q8N3X1 1017 aaPredicted RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
SOX6-214ENST00000531297 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 SMG9Q9H0W8 520 aaKnown RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
SOX6-214ENST00000531297 BCS1LQ9Y276 419 aa7.41□□□□□ -1.22
SOX6-214ENST00000531297 A6NJR5 290 aa7.4□□□□□ -1.22
SOX6-214ENST00000531297 PTCD1O75127 700 aaKnown RBP7.4□□□□□ -1.22
SOX6-214ENST00000531297 SASH3O75995 380 aa7.4□□□□□ -1.22
SOX6-214ENST00000531297 EGFRP00533 1210 aa7.4□□□□□ -1.22
SOX6-214ENST00000531297 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
SOX6-214ENST00000531297 WEE1P30291 646 aa7.4□□□□□ -1.22
SOX6-214ENST00000531297 IREB2P48200 963 aaKnown RBP7.4□□□□□ -1.22
SOX6-214ENST00000531297 IFT43Q96FT9 208 aa7.4□□□□□ -1.22
SOX6-214ENST00000531297 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
SOX6-214ENST00000531297 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
SOX6-214ENST00000531297 RTCBQ9Y3I0 505 aaKnown RBP7.4□□□□□ -1.22
SOX6-214ENST00000531297 GSC2O15499 205 aa7.39□□□□□ -1.23
SOX6-214ENST00000531297 XYLBO75191 536 aa7.39□□□□□ -1.23
SOX6-214ENST00000531297 SOX18P35713 384 aa7.39□□□□□ -1.23
SOX6-214ENST00000531297 ILDR2Q71H61 639 aa7.39□□□□□ -1.23
SOX6-214ENST00000531297 AKTIPQ9H8T0 292 aa7.39□□□□□ -1.23
SOX6-214ENST00000531297 QTRT2Q9H974 415 aaKnown RBP7.39□□□□□ -1.23
SOX6-214ENST00000531297 FAM177BA6PVY3 158 aa7.38□□□□□ -1.23
SOX6-214ENST00000531297 RFX1P22670 979 aa7.38□□□□□ -1.23
SOX6-214ENST00000531297 MLLT1Q03111 559 aaPredicted RBP7.38□□□□□ -1.23
SOX6-214ENST00000531297 GRIK5Q16478 980 aa7.38□□□□□ -1.23
SOX6-214ENST00000531297 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
SOX6-214ENST00000531297 CMTR1Q8N1G2 835 aaKnown RBP7.38□□□□□ -1.23
SOX6-214ENST00000531297 PLD4Q96BZ4 506 aa7.38□□□□□ -1.23
SOX6-214ENST00000531297 ZFATQ9P243 1243 aa7.38□□□□□ -1.23
SOX6-214ENST00000531297 LOC102724428A0A0B4J2F2 783 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 HYAL3O43820 417 aaPredicted RBP7.37□□□□□ -1.23
SOX6-214ENST00000531297 NOS3P29474 1203 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 SIK1P57059 783 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 SWI5Q1ZZU3 235 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 PRR23CQ6ZRP0 262 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 TREML1Q86YW5 311 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 TMEM130Q8N3G9 435 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 SPACA7Q96KW9 195 aa7.37□□□□□ -1.23
SOX6-214ENST00000531297 ZBTB42B2RXF5 422 aa7.36□□□□□ -1.23
SOX6-214ENST00000531297 PRKCSHP14314 528 aaPredicted RBP7.36□□□□□ -1.23
SOX6-214ENST00000531297 BRD2P25440 801 aaKnown RBP7.36□□□□□ -1.23
SOX6-214ENST00000531297 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
SOX6-214ENST00000531297 DLL1O00548 723 aa7.35□□□□□ -1.23
SOX6-214ENST00000531297 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
SOX6-214ENST00000531297 GDF6Q6KF10 455 aaPredicted RBP7.35□□□□□ -1.23
SOX6-214ENST00000531297 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
SOX6-214ENST00000531297 LGR5O75473 907 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 NLRP13Q86W25 1043 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 IL22RA1Q8N6P7 574 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 PIK3R5Q8WYR1 880 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 ARXQ96QS3 562 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 CEP41Q9BYV8 373 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 PCMTD2Q9NV79 361 aa7.34□□□□□ -1.23
SOX6-214ENST00000531297 GRNP28799 593 aaKnown RBP7.33□□□□□ -1.24
SOX6-214ENST00000531297 FAM117BQ6P1L5 589 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms