RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
SF3B2-210ENST00000530981 COL4A5P29400 1685 aa11.68□□□□□ -0.54
SF3B2-210ENST00000530981 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
SF3B2-210ENST00000530981 PDE8AO60658 829 aa11.68□□□□□ -0.54
SF3B2-210ENST00000530981 RLBP1P12271 317 aa11.68□□□□□ -0.54
SF3B2-210ENST00000530981 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
SF3B2-210ENST00000530981 GREM2Q9H772 168 aa11.68□□□□□ -0.54
SF3B2-210ENST00000530981 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
SF3B2-210ENST00000530981 UTYO14607 1347 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 MYH3P11055 1940 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 GRM8O00222 908 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 ALDH1L1O75891 902 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 CSF1RP07333 972 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 CTSWP56202 376 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 FRAT1Q92837 279 aaPredicted RBP11.67□□□□□ -0.54
SF3B2-210ENST00000530981 CLUAP1Q96AJ1 413 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
SF3B2-210ENST00000530981 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 PLA2G12BQ9BX93 195 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 SRCIN1Q9C0H9 1055 aa11.67□□□□□ -0.54
SF3B2-210ENST00000530981 PLIN1O60240 522 aa11.66□□□□□ -0.54
SF3B2-210ENST00000530981 ALDH1B1P30837 517 aa11.66□□□□□ -0.54
SF3B2-210ENST00000530981 ANKRD44Q8N8A2 993 aa11.66□□□□□ -0.54
SF3B2-210ENST00000530981 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-210ENST00000530981 GRAPQ13588 217 aa11.65□□□□□ -0.54
SF3B2-210ENST00000530981 FAM161AQ3B820 660 aa11.65□□□□□ -0.54
SF3B2-210ENST00000530981 GRAPLQ8TC17 118 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-210ENST00000530981 ARHGAP45Q92619 1136 aa11.65□□□□□ -0.54
SF3B2-210ENST00000530981 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
SF3B2-210ENST00000530981 DUOX1Q9NRD9 1551 aa11.65□□□□□ -0.54
SF3B2-210ENST00000530981 SPEF2Q9C093 1822 aa11.65□□□□□ -0.55
SF3B2-210ENST00000530981 LRRC37AA6NMS7 1700 aa11.64□□□□□ -0.55
SF3B2-210ENST00000530981 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
SF3B2-210ENST00000530981 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
SF3B2-210ENST00000530981 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
SF3B2-210ENST00000530981 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
SF3B2-210ENST00000530981 ATF7IPQ6VMQ6 1270 aa11.64□□□□□ -0.55
SF3B2-210ENST00000530981 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
SF3B2-210ENST00000530981 TMEM57Q8N5G2 664 aa11.64□□□□□ -0.55
SF3B2-210ENST00000530981 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-210ENST00000530981 GPR101Q96P66 508 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-210ENST00000530981 MEIS3Q99687 375 aa11.64□□□□□ -0.55
SF3B2-210ENST00000530981 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
SF3B2-210ENST00000530981 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 BBOX1O75936 387 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 YY1P25490 414 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 GPSM2P81274 684 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 C20orf194Q5TEA3 1177 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 LMBR1LQ6UX01 489 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 PANK1Q8TE04 598 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 API5Q9BZZ5 524 aaKnown RBP11.63□□□□□ -0.55
SF3B2-210ENST00000530981 BICC1Q9H694 974 aaKnown RBP11.63□□□□□ -0.55
SF3B2-210ENST00000530981 C9orf78Q9NZ63 289 aaPredicted RBP11.63□□□□□ -0.55
SF3B2-210ENST00000530981 RCAN3Q9UKA8 241 aa11.63□□□□□ -0.55
SF3B2-210ENST00000530981 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 SNAP23O00161 211 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 ITGA6P23229 1130 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 RABL6Q3YEC7 729 aaPredicted RBP11.62□□□□□ -0.55
SF3B2-210ENST00000530981 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 CCDC93Q567U6 631 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 ZKSCAN2Q63HK3 967 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
SF3B2-210ENST00000530981 LTBP3Q9NS15 1303 aa11.61□□□□□ -0.55
SF3B2-210ENST00000530981 DICER1Q9UPY3 1922 aaKnown RBP11.61□□□□□ -0.55
SF3B2-210ENST00000530981 CCT4P50991 539 aaKnown RBP11.61□□□□□ -0.55
SF3B2-210ENST00000530981 ZNF784Q8NCA9 323 aaPredicted RBP11.61□□□□□ -0.55
SF3B2-210ENST00000530981 KLHDC4Q8TBB5 520 aa11.61□□□□□ -0.55
SF3B2-210ENST00000530981 PUS3Q9BZE2 481 aaKnown RBP11.61□□□□□ -0.55
SF3B2-210ENST00000530981 TAOK3Q9H2K8 898 aa11.61□□□□□ -0.55
SF3B2-210ENST00000530981 LMNB1P20700 586 aa11.6□□□□□ -0.55
SF3B2-210ENST00000530981 RFX5P48382 616 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-210ENST00000530981 FKBP4Q02790 459 aaKnown RBP eCLIP11.6□□□□□ -0.55
SF3B2-210ENST00000530981 PSMD1Q99460 953 aa11.6□□□□□ -0.55
SF3B2-210ENST00000530981 RTFDC1Q9BY42 306 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-210ENST00000530981 MINPP1Q9UNW1 487 aa11.6□□□□□ -0.55
SF3B2-210ENST00000530981 LRRFIP2Q9Y608 721 aaKnown RBP11.6□□□□□ -0.55
SF3B2-210ENST00000530981 IPO8O15397 1037 aaKnown RBP11.59□□□□□ -0.55
SF3B2-210ENST00000530981 KLRK1P26718 216 aa11.59□□□□□ -0.55
SF3B2-210ENST00000530981 RTKN2Q8IZC4 609 aa11.59□□□□□ -0.55
SF3B2-210ENST00000530981 MPNDQ8N594 471 aa11.59□□□□□ -0.55
SF3B2-210ENST00000530981 HELBQ8NG08 1087 aaPredicted RBP11.59□□□□□ -0.55
SF3B2-210ENST00000530981 KCNQ5Q9NR82 932 aa11.59□□□□□ -0.55
SF3B2-210ENST00000530981 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
SF3B2-210ENST00000530981 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
SF3B2-210ENST00000530981 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-210ENST00000530981 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
SF3B2-210ENST00000530981 AOC3Q16853 763 aa11.58□□□□□ -0.56
SF3B2-210ENST00000530981 TXNRD3Q86VQ6 643 aa11.58□□□□□ -0.56
SF3B2-210ENST00000530981 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
SF3B2-210ENST00000530981 DZIP1LQ8IYY4 767 aaKnown RBP11.58□□□□□ -0.56
SF3B2-210ENST00000530981 TBC1D16Q8TBP0 767 aa11.58□□□□□ -0.56
SF3B2-210ENST00000530981 ZNF526Q8TF50 670 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-210ENST00000530981 C1orf115Q9H7X2 142 aa11.58□□□□□ -0.56
SF3B2-210ENST00000530981 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-210ENST00000530981 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
SF3B2-210ENST00000530981 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
SF3B2-210ENST00000530981 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms