RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SMC4Q9NTJ3 1288 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 LIMD1Q9UGP4 676 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 PHRF1Q9P1Y6 1649 aaKnown RBP7.07□□□□□ -1.28
PCF11-205ENST00000530906 KDRP35968 1356 aa7.07□□□□□ -1.28
PCF11-205ENST00000530906 SOS1Q07889 1333 aaPredicted RBP7.06□□□□□ -1.28
PCF11-205ENST00000530906 PPM1GO15355 546 aaPredicted RBP7.06□□□□□ -1.28
PCF11-205ENST00000530906 HTATSF1O43719 755 aaKnown RBP7.06□□□□□ -1.28
PCF11-205ENST00000530906 NR3C2P08235 984 aa7.06□□□□□ -1.28
PCF11-205ENST00000530906 EXOSC9Q06265 439 aaKnown RBP7.06□□□□□ -1.28
PCF11-205ENST00000530906 CSPP1Q1MSJ5 1256 aa7.06□□□□□ -1.28
PCF11-205ENST00000530906 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
PCF11-205ENST00000530906 NGDNQ8NEJ9 315 aaKnown RBP7.06□□□□□ -1.28
PCF11-205ENST00000530906 FRAT1Q92837 279 aaPredicted RBP7.06□□□□□ -1.28
PCF11-205ENST00000530906 PEAK1Q9H792 1746 aa7.06□□□□□ -1.28
PCF11-205ENST00000530906 KIAA0232Q92628 1395 aa7.06□□□□□ -1.28
PCF11-205ENST00000530906 NPHP4O75161 1426 aaPredicted RBP7.05□□□□□ -1.28
PCF11-205ENST00000530906 SOBPA7XYQ1 873 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 LILRB3O75022 631 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 ZIC2O95409 532 aaPredicted RBP7.05□□□□□ -1.28
PCF11-205ENST00000530906 NR5A1Q13285 461 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 HDAC1Q13547 482 aaPredicted RBP7.05□□□□□ -1.28
PCF11-205ENST00000530906 ARID5BQ14865 1188 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 PANK1Q8TE04 598 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 ITPKCQ96DU7 683 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 COG6Q9Y2V7 657 aa7.05□□□□□ -1.28
PCF11-205ENST00000530906 RGPD8O14715 1765 aaPredicted RBP7.05□□□□□ -1.28
PCF11-205ENST00000530906 NCOA3Q9Y6Q9 1424 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 KIF1AQ12756 1690 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 TRIM27P14373 513 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 KCNA6P17658 529 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 PDE4DQ08499 809 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 EIF4A2Q14240 407 aaKnown RBP7.04□□□□□ -1.28
PCF11-205ENST00000530906 BPHLQ86WA6 291 aaPredicted RBP7.04□□□□□ -1.28
PCF11-205ENST00000530906 ZSCAN1Q8NBB4 408 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 SSH1Q8WYL5 1049 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 TSR2Q969E8 191 aaKnown RBP7.04□□□□□ -1.28
PCF11-205ENST00000530906 C1QTNF2Q9BXJ5 285 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 BABAM1Q9NWV8 329 aa7.04□□□□□ -1.28
PCF11-205ENST00000530906 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
PCF11-205ENST00000530906 MARF1Q9Y4F3 1742 aaKnown RBP7.04□□□□□ -1.28
PCF11-205ENST00000530906 IGSF1Q8N6C5 1336 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 MST1RQ04912 1400 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 LRRC37A3O60309 1634 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 EIF5BO60841 1220 aaKnown RBP7.03□□□□□ -1.28
PCF11-205ENST00000530906 HMOX1P09601 288 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 VSIG8P0DPA2 414 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 RRS1Q15050 365 aaKnown RBP7.03□□□□□ -1.28
PCF11-205ENST00000530906 SH3RF1Q7Z6J0 888 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 GAS2L2Q8NHY3 880 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 PHACTR3Q96KR7 559 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 API5Q9BZZ5 524 aaKnown RBP7.03□□□□□ -1.28
PCF11-205ENST00000530906 PLEKHG2Q9H7P9 1386 aa7.03□□□□□ -1.28
PCF11-205ENST00000530906 MAP3K19Q56UN5 1328 aa7.02□□□□□ -1.28
PCF11-205ENST00000530906 DCCP43146 1447 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 CHL1O00533 1208 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 VAMP4O75379 141 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 RLBP1P12271 317 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 RTL5Q5HYW3 569 aaPredicted RBP7.02□□□□□ -1.29
PCF11-205ENST00000530906 SULT6B1Q6IMI4 303 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 KCNH5Q8NCM2 988 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 LMTK3Q96Q04 1460 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 CACNA1FO60840 1977 aa7.02□□□□□ -1.29
PCF11-205ENST00000530906 ABCC4O15439 1325 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 NUTM2BA6NNL0 878 aaPredicted RBP7.01□□□□□ -1.29
PCF11-205ENST00000530906 NUTM2EB1AL46 878 aaPredicted RBP7.01□□□□□ -1.29
PCF11-205ENST00000530906 AMPHP49418 695 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 AGERQ15109 404 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 TWISTNBQ3B726 338 aaPredicted RBP7.01□□□□□ -1.29
PCF11-205ENST00000530906 SH3BP5LQ7L8J4 393 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 NUTM2AQ8IVF1 878 aaPredicted RBP7.01□□□□□ -1.29
PCF11-205ENST00000530906 ITPRIPQ8IWB1 547 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 SMC5Q8IY18 1101 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 ARMC2Q8NEN0 867 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 TSC1Q92574 1164 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 MBIPQ9NS73 344 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 ZBTB40Q9NUA8 1239 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 NOB1Q9ULX3 412 aaKnown RBP7.01□□□□□ -1.29
PCF11-205ENST00000530906 NFAT5O94916 1531 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 ABCC6O95255 1503 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 PTPRCP08575 1304 aa7.01□□□□□ -1.29
PCF11-205ENST00000530906 IGHDP01880 384 aa7□□□□□ -1.29
PCF11-205ENST00000530906 C8orf34Q49A92 452 aa7□□□□□ -1.29
PCF11-205ENST00000530906 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
PCF11-205ENST00000530906 C6orf118Q5T5N4 469 aa7□□□□□ -1.29
PCF11-205ENST00000530906 TRMT44Q8IYL2 757 aaKnown RBP7□□□□□ -1.29
PCF11-205ENST00000530906 MEIOBQ8N635 442 aa7□□□□□ -1.29
PCF11-205ENST00000530906 RTF1Q92541 710 aaKnown RBP7□□□□□ -1.29
PCF11-205ENST00000530906 GCC1Q96CN9 775 aa7□□□□□ -1.29
PCF11-205ENST00000530906 BCL2L13Q9BXK5 485 aa7□□□□□ -1.29
PCF11-205ENST00000530906 UPF2Q9HAU5 1272 aaKnown RBP7□□□□□ -1.29
PCF11-205ENST00000530906 MAP4K5Q9Y4K4 846 aa7□□□□□ -1.29
PCF11-205ENST00000530906 SLIT3O75094 1523 aa7□□□□□ -1.29
PCF11-205ENST00000530906 OVOS2A0A0G2JMS6 1433 aa7□□□□□ -1.29
PCF11-205ENST00000530906 CRB1P82279 1406 aa7□□□□□ -1.29
PCF11-205ENST00000530906 LTN1O94822 1766 aa7□□□□□ -1.29
PCF11-205ENST00000530906 MAN1A2O60476 641 aa6.99□□□□□ -1.29
PCF11-205ENST00000530906 FBLN1P23142 703 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms