RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 HYPKQ9NX55 129 aa23.7■■□□□ 1.38
PSMC3-208ENST00000530887 CIAPIN1Q6FI81 312 aa23.69■■□□□ 1.38
PSMC3-208ENST00000530887 COL4A5P29400 1685 aa23.69■■□□□ 1.38
PSMC3-208ENST00000530887 WDR33Q9C0J8 1336 aaKnown RBP23.68■■□□□ 1.38
PSMC3-208ENST00000530887 ANXA1P04083 346 aa23.68■■□□□ 1.38
PSMC3-208ENST00000530887 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
PSMC3-208ENST00000530887 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
PSMC3-208ENST00000530887 CFAP44Q96MT7 982 aa23.68■■□□□ 1.38
PSMC3-208ENST00000530887 CAPN15O75808 1086 aa23.67■■□□□ 1.38
PSMC3-208ENST00000530887 CXCL9Q07325 125 aa23.67■■□□□ 1.38
PSMC3-208ENST00000530887 BEGAINQ9BUH8 593 aa23.67■■□□□ 1.38
PSMC3-208ENST00000530887 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
PSMC3-208ENST00000530887 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
PSMC3-208ENST00000530887 BCL2L13Q9BXK5 485 aa23.66■■□□□ 1.38
PSMC3-208ENST00000530887 CHPF2Q9P2E5 772 aa23.66■■□□□ 1.38
PSMC3-208ENST00000530887 LAS1LQ9Y4W2 734 aaKnown RBP23.66■■□□□ 1.38
PSMC3-208ENST00000530887 TRPM7Q96QT4 1865 aa23.66■■□□□ 1.38
PSMC3-208ENST00000530887 LTBP1Q14766 1721 aa23.65■■□□□ 1.38
PSMC3-208ENST00000530887 SF3B3Q15393 1217 aaKnown RBP23.65■■□□□ 1.38
PSMC3-208ENST00000530887 NECTIN2Q92692 538 aa23.65■■□□□ 1.38
PSMC3-208ENST00000530887 HHIPL1Q96JK4 782 aa23.65■■□□□ 1.38
PSMC3-208ENST00000530887 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
PSMC3-208ENST00000530887 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.37
PSMC3-208ENST00000530887 CCDC146Q8IYE0 955 aa23.64■■□□□ 1.37
PSMC3-208ENST00000530887 ISCA1Q9BUE6 129 aa23.64■■□□□ 1.37
PSMC3-208ENST00000530887 LAMB2P55268 1798 aa23.64■■□□□ 1.37
PSMC3-208ENST00000530887 EYA3Q99504 573 aa23.63■■□□□ 1.37
PSMC3-208ENST00000530887 PGAP2Q9UHJ9 254 aa23.63■■□□□ 1.37
PSMC3-208ENST00000530887 TLL2Q9Y6L7 1015 aa23.63■■□□□ 1.37
PSMC3-208ENST00000530887 H7C1D1 291 aa23.62■■□□□ 1.37
PSMC3-208ENST00000530887 MAP2K2P36507 400 aa23.62■■□□□ 1.37
PSMC3-208ENST00000530887 GMPSP49915 693 aaPredicted RBP23.62■■□□□ 1.37
PSMC3-208ENST00000530887 CA12O43570 354 aa23.61■■□□□ 1.37
PSMC3-208ENST00000530887 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
PSMC3-208ENST00000530887 DPF2Q92785 391 aa23.61■■□□□ 1.37
PSMC3-208ENST00000530887 CAPNS2Q96L46 248 aa23.61■■□□□ 1.37
PSMC3-208ENST00000530887 LRRC37AA6NMS7 1700 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 RPS12P25398 132 aaKnown RBP23.6■■□□□ 1.37
PSMC3-208ENST00000530887 GNAI1P63096 354 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 PAXIP1Q6ZW49 1069 aaPredicted RBP23.6■■□□□ 1.37
PSMC3-208ENST00000530887 CDC37L1Q7L3B6 337 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 IFT57Q9NWB7 429 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
PSMC3-208ENST00000530887 THSD7BQ9C0I4 1608 aa23.59■■□□□ 1.37
PSMC3-208ENST00000530887 GPR101Q96P66 508 aaPredicted RBP23.59■■□□□ 1.37
PSMC3-208ENST00000530887 LBX1P52954 281 aa23.58■■□□□ 1.37
PSMC3-208ENST00000530887 KRT24Q2M2I5 525 aa23.58■■□□□ 1.37
PSMC3-208ENST00000530887 RAD17O75943 681 aa23.57■■□□□ 1.36
PSMC3-208ENST00000530887 HSPA8P11142 646 aaKnown RBP23.57■■□□□ 1.36
PSMC3-208ENST00000530887 CST9Q5W186 159 aa23.57■■□□□ 1.36
PSMC3-208ENST00000530887 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
PSMC3-208ENST00000530887 FAM89AQ96GI7 184 aa23.57■■□□□ 1.36
PSMC3-208ENST00000530887 CNOT7Q9UIV1 285 aaKnown RBP23.57■■□□□ 1.36
PSMC3-208ENST00000530887 NSFL1CQ9UNZ2 370 aaKnown RBP23.57■■□□□ 1.36
PSMC3-208ENST00000530887 IRS4O14654 1257 aaPredicted RBP23.56■■□□□ 1.36
PSMC3-208ENST00000530887 CELF2O95319 508 aaKnown RBP23.56■■□□□ 1.36
PSMC3-208ENST00000530887 DDX58O95786 925 aaKnown RBP23.56■■□□□ 1.36
PSMC3-208ENST00000530887 SAPCD2Q86UD0 394 aa23.56■■□□□ 1.36
PSMC3-208ENST00000530887 ZBTB38Q8NAP3 1195 aaPredicted RBP23.56■■□□□ 1.36
PSMC3-208ENST00000530887 MBIPQ9NS73 344 aa23.56■■□□□ 1.36
PSMC3-208ENST00000530887 ZNF853P0CG23 659 aa23.55■■□□□ 1.36
PSMC3-208ENST00000530887 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
PSMC3-208ENST00000530887 CCDC191Q8NCU4 936 aa23.55■■□□□ 1.36
PSMC3-208ENST00000530887 PRKRIP1Q9H875 184 aaPredicted RBP23.55■■□□□ 1.36
PSMC3-208ENST00000530887 DDX60Q8IY21 1712 aaKnown RBP23.55■■□□□ 1.36
PSMC3-208ENST00000530887 C6orf229H3BNL8 230 aa23.54■■□□□ 1.36
PSMC3-208ENST00000530887 TRAF5O00463 557 aa23.54■■□□□ 1.36
PSMC3-208ENST00000530887 ATP5J2-PTCD1G3V325 749 aa23.53■■□□□ 1.36
PSMC3-208ENST00000530887 CCDC152Q4G0S7 254 aa23.53■■□□□ 1.36
PSMC3-208ENST00000530887 CYP4F22Q6NT55 531 aa23.53■■□□□ 1.36
PSMC3-208ENST00000530887 MICALL2Q8IY33 904 aa23.53■■□□□ 1.36
PSMC3-208ENST00000530887 CELF1Q92879 486 aaKnown RBP23.53■■□□□ 1.36
PSMC3-208ENST00000530887 PODXL2Q9NZ53 605 aa23.53■■□□□ 1.36
PSMC3-208ENST00000530887 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
PSMC3-208ENST00000530887 YDJCA8MPS7 323 aa23.52■■□□□ 1.36
PSMC3-208ENST00000530887 SLC51AQ86UW1 340 aa23.52■■□□□ 1.36
PSMC3-208ENST00000530887 ZC3H12CQ9C0D7 883 aaKnown RBP23.52■■□□□ 1.36
PSMC3-208ENST00000530887 BRPF1P55201 1214 aaPredicted RBP23.51■■□□□ 1.35
PSMC3-208ENST00000530887 CCDC30Q5VVM6 783 aa23.51■■□□□ 1.35
PSMC3-208ENST00000530887 GLIS2Q9BZE0 524 aaPredicted RBP23.51■■□□□ 1.35
PSMC3-208ENST00000530887 G3V3G9 751 aa23.5■■□□□ 1.35
PSMC3-208ENST00000530887 PSMD14O00487 310 aa23.5■■□□□ 1.35
PSMC3-208ENST00000530887 PCCAP05165 728 aaPredicted RBP23.5■■□□□ 1.35
PSMC3-208ENST00000530887 DCAF8Q5TAQ9 597 aa23.5■■□□□ 1.35
PSMC3-208ENST00000530887 ECE2O60344 883 aa23.49■■□□□ 1.35
PSMC3-208ENST00000530887 PDE8AO60658 829 aa23.49■■□□□ 1.35
PSMC3-208ENST00000530887 NOGQ13253 232 aa23.49■■□□□ 1.35
PSMC3-208ENST00000530887 TBC1D16Q8TBP0 767 aa23.49■■□□□ 1.35
PSMC3-208ENST00000530887 CWC25Q9NXE8 425 aaPredicted RBP23.49■■□□□ 1.35
PSMC3-208ENST00000530887 POLLQ9UGP5 575 aa23.49■■□□□ 1.35
PSMC3-208ENST00000530887 APAF1O14727 1248 aa23.48■■□□□ 1.35
PSMC3-208ENST00000530887 HIRAP54198 1017 aaPredicted RBP23.48■■□□□ 1.35
PSMC3-208ENST00000530887 GPSM2P81274 684 aa23.48■■□□□ 1.35
PSMC3-208ENST00000530887 GRM1Q13255 1194 aa23.48■■□□□ 1.35
PSMC3-208ENST00000530887 TRPM4Q8TD43 1214 aa23.48■■□□□ 1.35
PSMC3-208ENST00000530887 DCPSQ96C86 337 aaKnown RBP23.48■■□□□ 1.35
PSMC3-208ENST00000530887 DBNDD1Q9H9R9 158 aa23.48■■□□□ 1.35
PSMC3-208ENST00000530887 GGA1Q9UJY5 639 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms