RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ZNF784Q8NCA9 323 aaPredicted RBP20.21■□□□□ 0.83
BRK1-201ENST00000530758 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
BRK1-201ENST00000530758 ZBTB7BO15156 539 aaPredicted RBP20.2■□□□□ 0.82
BRK1-201ENST00000530758 GRIN3BO60391 1043 aa20.2■□□□□ 0.82
BRK1-201ENST00000530758 FOXO4P98177 505 aa20.2■□□□□ 0.82
BRK1-201ENST00000530758 TTLL11Q8NHH1 800 aa20.2■□□□□ 0.82
BRK1-201ENST00000530758 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
BRK1-201ENST00000530758 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
BRK1-201ENST00000530758 GNAI3P08754 354 aa20.19■□□□□ 0.82
BRK1-201ENST00000530758 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
BRK1-201ENST00000530758 PIM2Q9P1W9 311 aa20.19■□□□□ 0.82
BRK1-201ENST00000530758 RTL9Q8NET4 1388 aa20.19■□□□□ 0.82
BRK1-201ENST00000530758 ALDH1B1P30837 517 aa20.18■□□□□ 0.82
BRK1-201ENST00000530758 CTSWP56202 376 aa20.18■□□□□ 0.82
BRK1-201ENST00000530758 MVPQ14764 893 aaKnown RBP20.18■□□□□ 0.82
BRK1-201ENST00000530758 RABL6Q3YEC7 729 aaPredicted RBP20.18■□□□□ 0.82
BRK1-201ENST00000530758 C20orf194Q5TEA3 1177 aa20.18■□□□□ 0.82
BRK1-201ENST00000530758 CNKSR1Q969H4 720 aa20.18■□□□□ 0.82
BRK1-201ENST00000530758 MEIS3Q99687 375 aa20.18■□□□□ 0.82
BRK1-201ENST00000530758 EPHA10Q5JZY3 1008 aa20.17■□□□□ 0.82
BRK1-201ENST00000530758 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
BRK1-201ENST00000530758 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
BRK1-201ENST00000530758 ARFGEF1Q9Y6D6 1849 aa20.17■□□□□ 0.82
BRK1-201ENST00000530758 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
BRK1-201ENST00000530758 TAF1P21675 1872 aa20.16■□□□□ 0.82
BRK1-201ENST00000530758 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
BRK1-201ENST00000530758 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
BRK1-201ENST00000530758 TTLL6Q8N841 843 aa20.16■□□□□ 0.82
BRK1-201ENST00000530758 RPGRQ92834 1020 aaKnown RBP20.16■□□□□ 0.82
BRK1-201ENST00000530758 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
BRK1-201ENST00000530758 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
BRK1-201ENST00000530758 ZNF622Q969S3 477 aaKnown RBP eCLIP20.15■□□□□ 0.82
BRK1-201ENST00000530758 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
BRK1-201ENST00000530758 CACNA1SQ13698 1873 aa20.14■□□□□ 0.81
BRK1-201ENST00000530758 BBOX1O75936 387 aa20.14■□□□□ 0.81
BRK1-201ENST00000530758 DALRD3Q5D0E6 543 aaKnown RBP20.14■□□□□ 0.81
BRK1-201ENST00000530758 DDX46Q7L014 1031 aaKnown RBP20.14■□□□□ 0.81
BRK1-201ENST00000530758 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.81
BRK1-201ENST00000530758 COG6Q9Y2V7 657 aa20.14■□□□□ 0.81
BRK1-201ENST00000530758 GRAPQ13588 217 aa20.13■□□□□ 0.81
BRK1-201ENST00000530758 LMBR1LQ6UX01 489 aa20.13■□□□□ 0.81
BRK1-201ENST00000530758 ANKRD44Q8N8A2 993 aa20.13■□□□□ 0.81
BRK1-201ENST00000530758 GRAPLQ8TC17 118 aaPredicted RBP20.13■□□□□ 0.81
BRK1-201ENST00000530758 C7orf43Q8WVR3 580 aa20.13■□□□□ 0.81
BRK1-201ENST00000530758 BICC1Q9H694 974 aaKnown RBP20.13■□□□□ 0.81
BRK1-201ENST00000530758 GREM2Q9H772 168 aa20.12■□□□□ 0.81
BRK1-201ENST00000530758 ZBTB40Q9NUA8 1239 aa20.12■□□□□ 0.81
BRK1-201ENST00000530758 GNAI2P04899 355 aa20.11■□□□□ 0.81
BRK1-201ENST00000530758 MTX1Q13505 466 aa20.11■□□□□ 0.81
BRK1-201ENST00000530758 TMC4Q7Z404 712 aa20.11■□□□□ 0.81
BRK1-201ENST00000530758 SEC31BQ9NQW1 1179 aa20.11■□□□□ 0.81
BRK1-201ENST00000530758 LRRFIP2Q9Y608 721 aaKnown RBP20.11■□□□□ 0.81
BRK1-201ENST00000530758 RPS8P62241 208 aaKnown RBP20.1■□□□□ 0.81
BRK1-201ENST00000530758 PRPF40BQ6NWY9 871 aaKnown RBP20.1■□□□□ 0.81
BRK1-201ENST00000530758 CELF1Q92879 486 aaKnown RBP20.1■□□□□ 0.81
BRK1-201ENST00000530758 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
BRK1-201ENST00000530758 COL4A1P02462 1669 aa20.1■□□□□ 0.81
BRK1-201ENST00000530758 ITGA6P23229 1130 aa20.09■□□□□ 0.81
BRK1-201ENST00000530758 CDC5LQ99459 802 aaKnown RBP20.09■□□□□ 0.81
BRK1-201ENST00000530758 ANKRD18BA2A2Z9 1011 aa20.08■□□□□ 0.81
BRK1-201ENST00000530758 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
BRK1-201ENST00000530758 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
BRK1-201ENST00000530758 CC2D2BQ6DHV5 1058 aa20.08■□□□□ 0.81
BRK1-201ENST00000530758 SP8Q8IXZ3 490 aa20.08■□□□□ 0.81
BRK1-201ENST00000530758 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
BRK1-201ENST00000530758 LRRC37AA6NMS7 1700 aa20.07■□□□□ 0.8
BRK1-201ENST00000530758 FER1L6Q2WGJ9 1857 aa20.07■□□□□ 0.8
BRK1-201ENST00000530758 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
BRK1-201ENST00000530758 RFX5P48382 616 aaPredicted RBP20.07■□□□□ 0.8
BRK1-201ENST00000530758 CCDC57Q2TAC2 916 aa20.07■□□□□ 0.8
BRK1-201ENST00000530758 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
BRK1-201ENST00000530758 BSDC1Q9NW68 430 aaPredicted RBP20.07■□□□□ 0.8
BRK1-201ENST00000530758 ATP6V0A2Q9Y487 856 aa20.07■□□□□ 0.8
BRK1-201ENST00000530758 SNED1Q8TER0 1413 aa20.07■□□□□ 0.8
BRK1-201ENST00000530758 PPEF1O14829 653 aaPredicted RBP20.06■□□□□ 0.8
BRK1-201ENST00000530758 SOGA3Q5TF21 947 aa20.06■□□□□ 0.8
BRK1-201ENST00000530758 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
BRK1-201ENST00000530758 ATP8B2P98198 1209 aa20.05■□□□□ 0.8
BRK1-201ENST00000530758 AAMPQ13685 434 aa20.05■□□□□ 0.8
BRK1-201ENST00000530758 C21orf2O43822 256 aa20.04■□□□□ 0.8
BRK1-201ENST00000530758 CHMP3Q9Y3E7 222 aa20.04■□□□□ 0.8
BRK1-201ENST00000530758 SPEF2Q9C093 1822 aa20.04■□□□□ 0.8
BRK1-201ENST00000530758 IGHMBP2P38935 993 aaKnown RBP20.03■□□□□ 0.8
BRK1-201ENST00000530758 PTPN12Q05209 780 aaKnown RBP20.03■□□□□ 0.8
BRK1-201ENST00000530758 RPAP2Q8IXW5 612 aaPredicted RBP20.03■□□□□ 0.8
BRK1-201ENST00000530758 CRBNQ96SW2 442 aa20.03■□□□□ 0.8
BRK1-201ENST00000530758 COPRSQ9NQ92 184 aa20.03■□□□□ 0.8
BRK1-201ENST00000530758 FBXO3Q9UK99 471 aa20.03■□□□□ 0.8
BRK1-201ENST00000530758 POLA2Q14181 598 aa20.02■□□□□ 0.8
BRK1-201ENST00000530758 RTKN2Q8IZC4 609 aa20.02■□□□□ 0.8
BRK1-201ENST00000530758 SSH3Q8TE77 659 aa20.02■□□□□ 0.8
BRK1-201ENST00000530758 LTBP1Q14766 1721 aa20.02■□□□□ 0.79
BRK1-201ENST00000530758 SBF1O95248 1867 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 CCDC93Q567U6 631 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 CEP85Q6P2H3 762 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 ARHGAP27Q6ZUM4 889 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 MPHOSPH8Q99549 860 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 C1orf115Q9H7X2 142 aa20.01■□□□□ 0.79
BRK1-201ENST00000530758 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms