RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 CAPNS2Q96L46 248 aa19.53■□□□□ 0.72
CAPN1-219ENST00000530495 PGAP2Q9UHJ9 254 aa19.53■□□□□ 0.72
CAPN1-219ENST00000530495 TAF1P21675 1872 aa19.52■□□□□ 0.72
CAPN1-219ENST00000530495 GMPSP49915 693 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-219ENST00000530495 GRAPQ13588 217 aa19.52■□□□□ 0.72
CAPN1-219ENST00000530495 CIAPIN1Q6FI81 312 aa19.52■□□□□ 0.72
CAPN1-219ENST00000530495 GRAPLQ8TC17 118 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-219ENST00000530495 TLL2Q9Y6L7 1015 aa19.52■□□□□ 0.72
CAPN1-219ENST00000530495 CDHR2Q9BYE9 1310 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 THSD7BQ9C0I4 1608 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 TNIP1Q15025 636 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 NEUROD2Q15784 382 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 CYP4F22Q6NT55 531 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 TMC4Q7Z404 712 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 GPR101Q96P66 508 aaPredicted RBP19.51■□□□□ 0.71
CAPN1-219ENST00000530495 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
CAPN1-219ENST00000530495 CCDC146Q8IYE0 955 aa19.5■□□□□ 0.71
CAPN1-219ENST00000530495 PLBD2Q8NHP8 589 aa19.5■□□□□ 0.71
CAPN1-219ENST00000530495 ZC3H15Q8WU90 426 aaKnown RBP19.5■□□□□ 0.71
CAPN1-219ENST00000530495 CHPF2Q9P2E5 772 aa19.5■□□□□ 0.71
CAPN1-219ENST00000530495 RAD17O75943 681 aa19.49■□□□□ 0.71
CAPN1-219ENST00000530495 MAP2K2P36507 400 aa19.49■□□□□ 0.71
CAPN1-219ENST00000530495 ANKRD13DQ6ZTN6 518 aa19.49■□□□□ 0.71
CAPN1-219ENST00000530495 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-219ENST00000530495 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
CAPN1-219ENST00000530495 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
CAPN1-219ENST00000530495 HOXB7P09629 217 aa19.48■□□□□ 0.71
CAPN1-219ENST00000530495 HIRAP54198 1017 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-219ENST00000530495 SAPCD2Q86UD0 394 aa19.48■□□□□ 0.71
CAPN1-219ENST00000530495 ISCA1Q9BUE6 129 aa19.48■□□□□ 0.71
CAPN1-219ENST00000530495 BEGAINQ9BUH8 593 aa19.48■□□□□ 0.71
CAPN1-219ENST00000530495 BCL2L13Q9BXK5 485 aa19.48■□□□□ 0.71
CAPN1-219ENST00000530495 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-219ENST00000530495 MYBBP1AQ9BQG0 1328 aaKnown RBP19.48■□□□□ 0.71
CAPN1-219ENST00000530495 DDX60Q8IY21 1712 aaKnown RBP19.48■□□□□ 0.71
CAPN1-219ENST00000530495 YDJCA8MPS7 323 aa19.47■□□□□ 0.71
CAPN1-219ENST00000530495 CELF2O95319 508 aaKnown RBP19.47■□□□□ 0.71
CAPN1-219ENST00000530495 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
CAPN1-219ENST00000530495 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
CAPN1-219ENST00000530495 HHIPL1Q96JK4 782 aa19.47■□□□□ 0.71
CAPN1-219ENST00000530495 GLIS2Q9BZE0 524 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-219ENST00000530495 CNOT7Q9UIV1 285 aaKnown RBP19.47■□□□□ 0.71
CAPN1-219ENST00000530495 LRRC37AA6NMS7 1700 aa19.47■□□□□ 0.71
CAPN1-219ENST00000530495 DUOX1Q9NRD9 1551 aa19.46■□□□□ 0.71
CAPN1-219ENST00000530495 GRM1Q13255 1194 aa19.46■□□□□ 0.71
CAPN1-219ENST00000530495 CDC37L1Q7L3B6 337 aa19.46■□□□□ 0.71
CAPN1-219ENST00000530495 ZNF428Q96B54 188 aa19.46■□□□□ 0.71
CAPN1-219ENST00000530495 FAM89AQ96GI7 184 aa19.46■□□□□ 0.71
CAPN1-219ENST00000530495 WASHC4Q2M389 1173 aa19.45■□□□□ 0.7
CAPN1-219ENST00000530495 ABHD8Q96I13 439 aa19.45■□□□□ 0.7
CAPN1-219ENST00000530495 ATP5J2-PTCD1G3V325 749 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 H7C1D1 291 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 AOC2O75106 756 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 TRIM28Q13263 835 aaKnown RBP19.44■□□□□ 0.7
CAPN1-219ENST00000530495 TRPM4Q8TD43 1214 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 DPF2Q92785 391 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 CELF1Q92879 486 aaKnown RBP19.44■□□□□ 0.7
CAPN1-219ENST00000530495 CFAP44Q96MT7 982 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
CAPN1-219ENST00000530495 ADAMTS8Q9UP79 889 aa19.44■□□□□ 0.7
CAPN1-219ENST00000530495 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
CAPN1-219ENST00000530495 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
CAPN1-219ENST00000530495 SHTN1A0MZ66 631 aa19.42■□□□□ 0.7
CAPN1-219ENST00000530495 DUSP27Q5VZP5 1158 aa19.42■□□□□ 0.7
CAPN1-219ENST00000530495 MICALL2Q8IY33 904 aa19.42■□□□□ 0.7
CAPN1-219ENST00000530495 POLLQ9UGP5 575 aa19.42■□□□□ 0.7
CAPN1-219ENST00000530495 ZBTB12Q9Y330 459 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-219ENST00000530495 PSMD14O00487 310 aa19.41■□□□□ 0.7
CAPN1-219ENST00000530495 GPSM2P81274 684 aa19.41■□□□□ 0.7
CAPN1-219ENST00000530495 DBNDD1Q9H9R9 158 aa19.41■□□□□ 0.7
CAPN1-219ENST00000530495 C6orf229H3BNL8 230 aa19.4■□□□□ 0.7
CAPN1-219ENST00000530495 RIMBP2O15034 1052 aa19.4■□□□□ 0.7
CAPN1-219ENST00000530495 CA12O43570 354 aa19.4■□□□□ 0.7
CAPN1-219ENST00000530495 RPS8P62241 208 aaKnown RBP19.4■□□□□ 0.7
CAPN1-219ENST00000530495 USP48Q86UV5 1035 aa19.4■□□□□ 0.7
CAPN1-219ENST00000530495 ZNF408Q9H9D4 720 aa19.4■□□□□ 0.7
CAPN1-219ENST00000530495 IRS4O14654 1257 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-219ENST00000530495 BRPF1P55201 1214 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-219ENST00000530495 RTL5Q5HYW3 569 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-219ENST00000530495 SAMD7Q7Z3H4 446 aa19.39■□□□□ 0.69
CAPN1-219ENST00000530495 EYA3Q99504 573 aa19.39■□□□□ 0.69
CAPN1-219ENST00000530495 MBIPQ9NS73 344 aa19.39■□□□□ 0.69
CAPN1-219ENST00000530495 COL4A1P02462 1669 aa19.39■□□□□ 0.69
CAPN1-219ENST00000530495 POLR2AP24928 1970 aaKnown RBP19.39■□□□□ 0.69
CAPN1-219ENST00000530495 ZNF853P0CG23 659 aa19.38■□□□□ 0.69
CAPN1-219ENST00000530495 RPS12P25398 132 aaKnown RBP19.38■□□□□ 0.69
CAPN1-219ENST00000530495 ZBTB38Q8NAP3 1195 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-219ENST00000530495 TBC1D16Q8TBP0 767 aa19.38■□□□□ 0.69
CAPN1-219ENST00000530495 KCNQ5Q9NR82 932 aa19.38■□□□□ 0.69
CAPN1-219ENST00000530495 TSKSQ9UJT2 592 aa19.38■□□□□ 0.69
CAPN1-219ENST00000530495 ECE2O60344 883 aa19.37■□□□□ 0.69
CAPN1-219ENST00000530495 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
CAPN1-219ENST00000530495 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
CAPN1-219ENST00000530495 EGFRP00533 1210 aa19.36■□□□□ 0.69
CAPN1-219ENST00000530495 HSP90B1P14625 803 aaKnown RBP19.36■□□□□ 0.69
CAPN1-219ENST00000530495 DOK7Q18PE1 504 aa19.36■□□□□ 0.69
CAPN1-219ENST00000530495 TBC1D10BQ4KMP7 808 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-219ENST00000530495 DLK2Q6UY11 383 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms