RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 SKAP1Q86WV1 359 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
SOX6-213ENST00000530378 PA2G4Q9UQ80 394 aaKnown RBP13.29□□□□□ -0.28
SOX6-213ENST00000530378 IBTKQ9P2D0 1353 aaPredicted RBP13.29□□□□□ -0.28
SOX6-213ENST00000530378 CTSWP56202 376 aa13.28□□□□□ -0.28
SOX6-213ENST00000530378 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
SOX6-213ENST00000530378 SIL1Q9H173 461 aa13.28□□□□□ -0.28
SOX6-213ENST00000530378 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
SOX6-213ENST00000530378 NRXN2Q9P2S2 1712 aa13.28□□□□□ -0.28
SOX6-213ENST00000530378 GOLGB1Q14789 3259 aaKnown RBP13.28□□□□□ -0.28
SOX6-213ENST00000530378 ATP8B2P98198 1209 aa13.27□□□□□ -0.28
SOX6-213ENST00000530378 RPAP2Q8IXW5 612 aaPredicted RBP13.27□□□□□ -0.28
SOX6-213ENST00000530378 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.28
SOX6-213ENST00000530378 GREM2Q9H772 168 aa13.27□□□□□ -0.28
SOX6-213ENST00000530378 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.28
SOX6-213ENST00000530378 PARP3Q9Y6F1 533 aa13.27□□□□□ -0.28
SOX6-213ENST00000530378 PDE8AO60658 829 aa13.27□□□□□ -0.29
SOX6-213ENST00000530378 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
SOX6-213ENST00000530378 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
SOX6-213ENST00000530378 CACNA1SQ13698 1873 aa13.26□□□□□ -0.29
SOX6-213ENST00000530378 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
SOX6-213ENST00000530378 ZBTB22O15209 634 aa13.26□□□□□ -0.29
SOX6-213ENST00000530378 HMMRO75330 724 aa13.26□□□□□ -0.29
SOX6-213ENST00000530378 ST5P78524 1137 aa13.26□□□□□ -0.29
SOX6-213ENST00000530378 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
SOX6-213ENST00000530378 RABL6Q3YEC7 729 aaPredicted RBP13.26□□□□□ -0.29
SOX6-213ENST00000530378 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
SOX6-213ENST00000530378 TTLL11Q8NHH1 800 aa13.25□□□□□ -0.29
SOX6-213ENST00000530378 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
SOX6-213ENST00000530378 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
SOX6-213ENST00000530378 MTX1Q13505 466 aa13.25□□□□□ -0.29
SOX6-213ENST00000530378 POLA2Q14181 598 aa13.25□□□□□ -0.29
SOX6-213ENST00000530378 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
SOX6-213ENST00000530378 SURF6O75683 361 aaKnown RBP13.24□□□□□ -0.29
SOX6-213ENST00000530378 ITGA6P23229 1130 aa13.24□□□□□ -0.29
SOX6-213ENST00000530378 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
SOX6-213ENST00000530378 CENPQQ7L2Z9 268 aaPredicted RBP13.24□□□□□ -0.29
SOX6-213ENST00000530378 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
SOX6-213ENST00000530378 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
SOX6-213ENST00000530378 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
SOX6-213ENST00000530378 CSF1RP07333 972 aa13.23□□□□□ -0.29
SOX6-213ENST00000530378 IFIT5Q13325 482 aaKnown RBP13.23□□□□□ -0.29
SOX6-213ENST00000530378 CCDC57Q2TAC2 916 aa13.23□□□□□ -0.29
SOX6-213ENST00000530378 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
SOX6-213ENST00000530378 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
SOX6-213ENST00000530378 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
SOX6-213ENST00000530378 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
SOX6-213ENST00000530378 SLC10A5Q5PT55 438 aa13.22□□□□□ -0.29
SOX6-213ENST00000530378 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
SOX6-213ENST00000530378 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
SOX6-213ENST00000530378 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
SOX6-213ENST00000530378 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
SOX6-213ENST00000530378 ANKRD18BA2A2Z9 1011 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 YY1P25490 414 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 ANKRD45Q5TZF3 282 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 MTFR1LQ9H019 292 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.29
SOX6-213ENST00000530378 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
SOX6-213ENST00000530378 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
SOX6-213ENST00000530378 IL1RAPL2Q9NP60 686 aa13.2□□□□□ -0.3
SOX6-213ENST00000530378 PPP1R1BQ9UD71 204 aaPredicted RBP13.2□□□□□ -0.3
SOX6-213ENST00000530378 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
SOX6-213ENST00000530378 CELF1Q92879 486 aaKnown RBP13.2□□□□□ -0.3
SOX6-213ENST00000530378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
SOX6-213ENST00000530378 A0A1B0GUL6 1792 aa13.19□□□□□ -0.3
SOX6-213ENST00000530378 POLD1P28340 1107 aa13.19□□□□□ -0.3
SOX6-213ENST00000530378 CHRNA5P30532 468 aa13.19□□□□□ -0.3
SOX6-213ENST00000530378 RGS3P49796 1198 aa13.19□□□□□ -0.3
SOX6-213ENST00000530378 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
SOX6-213ENST00000530378 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
SOX6-213ENST00000530378 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
SOX6-213ENST00000530378 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
SOX6-213ENST00000530378 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
SOX6-213ENST00000530378 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 DDX46Q7L014 1031 aaKnown RBP13.18□□□□□ -0.3
SOX6-213ENST00000530378 COPRSQ9NQ92 184 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
SOX6-213ENST00000530378 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
SOX6-213ENST00000530378 RTL9Q8NET4 1388 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 EYA2O00167 538 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 SASH1O94885 1247 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 NUCB1Q02818 461 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 TFCP2Q12800 502 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 ATG9AQ7Z3C6 839 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
SOX6-213ENST00000530378 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
SOX6-213ENST00000530378 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
SOX6-213ENST00000530378 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms