RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 RNF216Q9NWF9 866 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-222ENST00000529919 YEATS4O95619 227 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 NF2P35240 595 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 UBE4AQ14139 1066 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 TBC1D9Q6ZT07 1266 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 UBE3BQ7Z3V4 1068 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 CCDC12Q8WUD4 166 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-222ENST00000529919 MPHOSPH10O00566 681 aaKnown RBP9.18□□□□□ -0.94
CTNND1-222ENST00000529919 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-222ENST00000529919 USP5P45974 858 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 UBE2HP62256 183 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 ZSCAN23Q3MJ62 389 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 BBXQ8WY36 941 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-222ENST00000529919 ARFGAP3Q9NP61 516 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 PCDH11XQ9BZA7 1347 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 PCDH11YQ9BZA8 1340 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 MCM6Q14566 821 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 NPATQ14207 1427 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 DISP3Q9P2K9 1392 aa9.18□□□□□ -0.94
CTNND1-222ENST00000529919 GOLGA6L9A6NEM1 432 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 SLC5A1P13866 664 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 PRIM1P49642 420 aaKnown RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 UVSSAQ2YD98 709 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 BMP2KLQ5H9B9 411 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 TTC12Q9H892 705 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 PLEKHH1Q9ULM0 1364 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 TARBP1Q13395 1621 aaKnown RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 IGSF3O75054 1194 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 CAVIN2O95810 425 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 POLR3DP05423 398 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 CCT2P78371 535 aaKnown RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 STX1AQ16623 288 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 ISM2Q6H9L7 571 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 OGFOD1Q8N543 542 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 CCDC196A0A1B0GTZ2 297 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 PI4KAP2A4QPH2 592 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 MATR3P43243 847 aaKnown RBP eCLIP9.17□□□□□ -0.941e-6■■■■■ 28.6
CTNND1-222ENST00000529919 FLIIQ13045 1269 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 PI4KAP1Q8N8J0 262 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 POLKQ9UBT6 870 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 MAP3K2Q9Y2U5 619 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 TSPOAP1O95153 1857 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 NPHP4O75161 1426 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-222ENST00000529919 TRIM27P14373 513 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 LIG1P18858 919 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 HOXC9P31274 260 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 CCDC152Q4G0S7 254 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 LRSAM1Q6UWE0 723 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 EYA1Q99502 592 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 ZKSCAN5Q9Y2L8 839 aa9.17□□□□□ -0.94
CTNND1-222ENST00000529919 MYO1BO43795 1136 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 SKILP12757 684 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 GJB2P29033 226 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 COPS6Q7L5N1 327 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 ABCC11Q96J66 1382 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 TMCO5BA8MYB1 307 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 MAATS1Q7Z4T9 603 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 XAGE3Q8WTP9 111 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 JARID2Q92833 1246 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-222ENST00000529919 DNAI1Q9UI46 699 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 MINDY4BA8MYZ0 360 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 GCOM1H8Y6P7 765 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-222ENST00000529919 MYZAPP0CAP1 466 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 ZNF76P36508 570 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 CCDC8Q9H0W5 538 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-222ENST00000529919 JADE2Q9NQC1 790 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.16□□□□□ -0.94
CTNND1-222ENST00000529919 V9GYY5 206 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-222ENST00000529919 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 ATP2C2O75185 946 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 GPR162Q16538 588 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 CTNNBL1Q8WYA6 563 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-222ENST00000529919 RSPH14Q9UHP6 348 aa9.16□□□□□ -0.94
CTNND1-222ENST00000529919 HMGB1P09429 215 aaKnown RBP9.15□□□□□ -0.94
CTNND1-222ENST00000529919 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.94
CTNND1-222ENST00000529919 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
CTNND1-222ENST00000529919 NAPBQ9H115 298 aa9.15□□□□□ -0.94
CTNND1-222ENST00000529919 MTIF2P46199 727 aaKnown RBP9.15□□□□□ -0.94
CTNND1-222ENST00000529919 HOOK3Q86VS8 718 aa9.15□□□□□ -0.94
CTNND1-222ENST00000529919 NYXQ9GZU5 481 aa9.15□□□□□ -0.94
CTNND1-222ENST00000529919 UBA5Q9GZZ9 404 aa9.15□□□□□ -0.94
CTNND1-222ENST00000529919 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.94
CTNND1-222ENST00000529919 MYCNP04198 464 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-222ENST00000529919 GTF2A1P52655 376 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-222ENST00000529919 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.95
CTNND1-222ENST00000529919 NSFL1CQ9UNZ2 370 aaKnown RBP9.15□□□□□ -0.95
CTNND1-222ENST00000529919 GOLGA8BA8MQT2 603 aa9.15□□□□□ -0.95
CTNND1-222ENST00000529919 IGHDP01880 384 aa9.15□□□□□ -0.95
CTNND1-222ENST00000529919 POTEJP0CG39 1038 aa9.15□□□□□ -0.95
CTNND1-222ENST00000529919 PRPF4BQ13523 1007 aaKnown RBP9.15□□□□□ -0.95
CTNND1-222ENST00000529919 ALS2CR12Q96Q35 445 aa9.15□□□□□ -0.95
CTNND1-222ENST00000529919 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.15□□□□□ -0.957e-6■□□□□ 8.3
CTNND1-222ENST00000529919 MAGI2Q86UL8 1455 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms