RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 KRT24Q2M2I5 525 aa15.78■□□□□ 0.12
USH1C-208ENST00000529563 CIAPIN1Q6FI81 312 aa15.78■□□□□ 0.12
USH1C-208ENST00000529563 ADARB2Q9NS39 739 aaKnown RBP15.78■□□□□ 0.12
USH1C-208ENST00000529563 COL4A5P29400 1685 aa15.78■□□□□ 0.12
USH1C-208ENST00000529563 ADAMTSL1Q8N6G6 1762 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 ECE1P42892 770 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 GMPSP49915 693 aaPredicted RBP15.77■□□□□ 0.12
USH1C-208ENST00000529563 ANKRD13DQ6ZTN6 518 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 TMC4Q7Z404 712 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 PLBD2Q8NHP8 589 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 PRDM10Q9NQV6 1147 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 GPRC5DQ9NZD1 345 aa15.77■□□□□ 0.12
USH1C-208ENST00000529563 DBF4Q9UBU7 674 aaPredicted RBP15.77■□□□□ 0.12
USH1C-208ENST00000529563 RAD17O75943 681 aa15.76■□□□□ 0.11
USH1C-208ENST00000529563 LBX1P52954 281 aa15.76■□□□□ 0.11
USH1C-208ENST00000529563 CXCL9Q07325 125 aa15.76■□□□□ 0.11
USH1C-208ENST00000529563 RTFDC1Q9BY42 306 aaPredicted RBP15.76■□□□□ 0.11
USH1C-208ENST00000529563 ANKRD36CQ5JPF3 1778 aa15.76■□□□□ 0.11
USH1C-208ENST00000529563 ATP5J2-PTCD1G3V325 749 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 TRAF5O00463 557 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 ANP32CO43423 234 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 HOXB7P09629 217 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
USH1C-208ENST00000529563 CAPNS2Q96L46 248 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 HYPKQ9NX55 129 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 WBP1LQ9NX94 342 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 ADAMTS8Q9UP79 889 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
USH1C-208ENST00000529563 C6orf229H3BNL8 230 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 H7C1D1 291 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
USH1C-208ENST00000529563 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 DUSP27Q5VZP5 1158 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 FAM89AQ96GI7 184 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 ZNF408Q9H9D4 720 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 NSFL1CQ9UNZ2 370 aaKnown RBP15.74■□□□□ 0.11
USH1C-208ENST00000529563 LTBP1Q14766 1721 aa15.74■□□□□ 0.11
USH1C-208ENST00000529563 G3V3G9 751 aa15.73■□□□□ 0.11
USH1C-208ENST00000529563 CELF2O95319 508 aaKnown RBP15.73■□□□□ 0.11
USH1C-208ENST00000529563 CALD1Q05682 793 aaKnown RBP15.73■□□□□ 0.11
USH1C-208ENST00000529563 WASHC4Q2M389 1173 aa15.73■□□□□ 0.11
USH1C-208ENST00000529563 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
USH1C-208ENST00000529563 CYP4F22Q6NT55 531 aa15.73■□□□□ 0.11
USH1C-208ENST00000529563 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
USH1C-208ENST00000529563 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
USH1C-208ENST00000529563 RIMBP2O15034 1052 aa15.72■□□□□ 0.11
USH1C-208ENST00000529563 HSP90B1P14625 803 aaKnown RBP15.72■□□□□ 0.11
USH1C-208ENST00000529563 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
USH1C-208ENST00000529563 EYA3Q99504 573 aa15.72■□□□□ 0.11
USH1C-208ENST00000529563 LAMB2P55268 1798 aa15.72■□□□□ 0.11
USH1C-208ENST00000529563 IRS4O14654 1257 aaPredicted RBP15.71■□□□□ 0.11
USH1C-208ENST00000529563 GLIS2Q9BZE0 524 aaPredicted RBP15.71■□□□□ 0.11
USH1C-208ENST00000529563 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
USH1C-208ENST00000529563 CNOT7Q9UIV1 285 aaKnown RBP15.71■□□□□ 0.11
USH1C-208ENST00000529563 ELL2O00472 640 aaPredicted RBP15.7■□□□□ 0.1
USH1C-208ENST00000529563 GNAI1P63096 354 aa15.7■□□□□ 0.1
USH1C-208ENST00000529563 MICALL2Q8IY33 904 aa15.7■□□□□ 0.1
USH1C-208ENST00000529563 CELF1Q92879 486 aaKnown RBP15.7■□□□□ 0.1
USH1C-208ENST00000529563 ISCA1Q9BUE6 129 aa15.7■□□□□ 0.1
USH1C-208ENST00000529563 DBNDD1Q9H9R9 158 aa15.7■□□□□ 0.1
USH1C-208ENST00000529563 TLL2Q9Y6L7 1015 aa15.7■□□□□ 0.1
USH1C-208ENST00000529563 HSPA8P11142 646 aaKnown RBP15.69■□□□□ 0.1
USH1C-208ENST00000529563 SF3B3Q15393 1217 aaKnown RBP15.69■□□□□ 0.1
USH1C-208ENST00000529563 CST9Q5W186 159 aa15.69■□□□□ 0.1
USH1C-208ENST00000529563 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
USH1C-208ENST00000529563 ZC3H15Q8WU90 426 aaKnown RBP15.69■□□□□ 0.1
USH1C-208ENST00000529563 CHMP4AQ9BY43 222 aa15.69■□□□□ 0.1
USH1C-208ENST00000529563 ANKIB1Q9P2G1 1089 aa15.69■□□□□ 0.1
USH1C-208ENST00000529563 TRPM7Q96QT4 1865 aa15.68■□□□□ 0.1
USH1C-208ENST00000529563 APAF1O14727 1248 aa15.68■□□□□ 0.1
USH1C-208ENST00000529563 DDX58O95786 925 aaKnown RBP15.68■□□□□ 0.1
USH1C-208ENST00000529563 GPSM2P81274 684 aa15.68■□□□□ 0.1
USH1C-208ENST00000529563 TRPM4Q8TD43 1214 aa15.68■□□□□ 0.1
USH1C-208ENST00000529563 MYD88Q99836 296 aa15.68■□□□□ 0.1
USH1C-208ENST00000529563 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
USH1C-208ENST00000529563 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
USH1C-208ENST00000529563 YDJCA8MPS7 323 aa15.67■□□□□ 0.1
USH1C-208ENST00000529563 PSMD14O00487 310 aa15.67■□□□□ 0.1
USH1C-208ENST00000529563 ECE2O60344 883 aa15.67■□□□□ 0.1
USH1C-208ENST00000529563 AOC2O75106 756 aa15.67■□□□□ 0.1
USH1C-208ENST00000529563 RPS8P62241 208 aaKnown RBP15.67■□□□□ 0.1
USH1C-208ENST00000529563 DOK7Q18PE1 504 aa15.67■□□□□ 0.1
USH1C-208ENST00000529563 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
USH1C-208ENST00000529563 ZC3H12CQ9C0D7 883 aaKnown RBP15.67■□□□□ 0.1
USH1C-208ENST00000529563 TAF1P21675 1872 aa15.67■□□□□ 0.1
USH1C-208ENST00000529563 TRIM28Q13263 835 aaKnown RBP15.66■□□□□ 0.1
USH1C-208ENST00000529563 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
USH1C-208ENST00000529563 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
USH1C-208ENST00000529563 SAPCD2Q86UD0 394 aa15.66■□□□□ 0.1
USH1C-208ENST00000529563 USP48Q86UV5 1035 aa15.66■□□□□ 0.1
USH1C-208ENST00000529563 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
USH1C-208ENST00000529563 DCPSQ96C86 337 aaKnown RBP15.66■□□□□ 0.1
USH1C-208ENST00000529563 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
USH1C-208ENST00000529563 PRKRIP1Q9H875 184 aaPredicted RBP15.66■□□□□ 0.1
USH1C-208ENST00000529563 POLLQ9UGP5 575 aa15.66■□□□□ 0.1
USH1C-208ENST00000529563 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
USH1C-208ENST00000529563 SHTN1A0MZ66 631 aa15.65■□□□□ 0.1
USH1C-208ENST00000529563 UFL1O94874 794 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms