RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
SSH3-206ENST00000529224 FZD9O00144 591 aa16.78■□□□□ 0.28
SSH3-206ENST00000529224 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
SSH3-206ENST00000529224 GRAPQ13588 217 aa16.78■□□□□ 0.28
SSH3-206ENST00000529224 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
SSH3-206ENST00000529224 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
SSH3-206ENST00000529224 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
SSH3-206ENST00000529224 TAF1DQ9H5J8 278 aaPredicted RBP16.78■□□□□ 0.28
SSH3-206ENST00000529224 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
SSH3-206ENST00000529224 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
SSH3-206ENST00000529224 LRRC37AA6NMS7 1700 aa16.78■□□□□ 0.28
SSH3-206ENST00000529224 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.28
SSH3-206ENST00000529224 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
SSH3-206ENST00000529224 EXOSC9Q06265 439 aaKnown RBP16.77■□□□□ 0.28
SSH3-206ENST00000529224 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
SSH3-206ENST00000529224 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
SSH3-206ENST00000529224 TMC4Q7Z404 712 aa16.77■□□□□ 0.28
SSH3-206ENST00000529224 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.28
SSH3-206ENST00000529224 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.27
SSH3-206ENST00000529224 IQCA1LA6NCM1 817 aa16.76■□□□□ 0.27
SSH3-206ENST00000529224 VAMP4O75379 141 aa16.76■□□□□ 0.27
SSH3-206ENST00000529224 CAPN15O75808 1086 aa16.76■□□□□ 0.27
SSH3-206ENST00000529224 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
SSH3-206ENST00000529224 NEXNQ0ZGT2 675 aa16.76■□□□□ 0.27
SSH3-206ENST00000529224 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
SSH3-206ENST00000529224 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
SSH3-206ENST00000529224 G2E3Q7L622 706 aa16.75■□□□□ 0.27
SSH3-206ENST00000529224 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
SSH3-206ENST00000529224 LTBP1Q14766 1721 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 FLIIQ13045 1269 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 LDHDQ86WU2 507 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 LARGE2Q8N3Y3 721 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 VPS33BQ9H267 617 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 HACL1Q9UJ83 578 aa16.74■□□□□ 0.27
SSH3-206ENST00000529224 ZNF521Q96K83 1311 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 EPHX2P34913 555 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 FKBP5Q13451 457 aaPredicted RBP16.73■□□□□ 0.27
SSH3-206ENST00000529224 DPP8Q6V1X1 898 aaPredicted RBP16.73■□□□□ 0.27
SSH3-206ENST00000529224 TNS4Q8IZW8 715 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 GPC2Q8N158 579 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 MPNDQ8N594 471 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
SSH3-206ENST00000529224 SPEF2Q9C093 1822 aa16.73■□□□□ 0.27
SSH3-206ENST00000529224 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
SSH3-206ENST00000529224 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
SSH3-206ENST00000529224 PDE8AO60658 829 aa16.72■□□□□ 0.27
SSH3-206ENST00000529224 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
SSH3-206ENST00000529224 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
SSH3-206ENST00000529224 EIF6P56537 245 aaKnown RBP16.72■□□□□ 0.27
SSH3-206ENST00000529224 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
SSH3-206ENST00000529224 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
SSH3-206ENST00000529224 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
SSH3-206ENST00000529224 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
SSH3-206ENST00000529224 ITGBL1O95965 494 aaPredicted RBP16.71■□□□□ 0.27
SSH3-206ENST00000529224 CCDC152Q4G0S7 254 aa16.71■□□□□ 0.27
SSH3-206ENST00000529224 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
SSH3-206ENST00000529224 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
SSH3-206ENST00000529224 COL4A1P02462 1669 aa16.7■□□□□ 0.26
SSH3-206ENST00000529224 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
SSH3-206ENST00000529224 AOC3Q16853 763 aa16.7■□□□□ 0.26
SSH3-206ENST00000529224 DNAAF4Q8WXU2 420 aa16.7■□□□□ 0.26
SSH3-206ENST00000529224 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
SSH3-206ENST00000529224 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
SSH3-206ENST00000529224 GJA3Q9Y6H8 435 aa16.7■□□□□ 0.26
SSH3-206ENST00000529224 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
SSH3-206ENST00000529224 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 E9PSI1 815 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 SCNN1DP51172 638 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 CTSWP56202 376 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 KIAA2012Q0VF49 1180 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
SSH3-206ENST00000529224 GCKRQ14397 625 aa16.67■□□□□ 0.26
SSH3-206ENST00000529224 MAP1SQ66K74 1059 aaPredicted RBP16.67■□□□□ 0.26
SSH3-206ENST00000529224 UBE3BQ7Z3V4 1068 aa16.67■□□□□ 0.26
SSH3-206ENST00000529224 PNMA8AQ86V59 439 aaPredicted RBP16.67■□□□□ 0.26
SSH3-206ENST00000529224 SEC31BQ9NQW1 1179 aa16.67■□□□□ 0.26
SSH3-206ENST00000529224 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
SSH3-206ENST00000529224 H7C1W4 665 aa16.66■□□□□ 0.26
SSH3-206ENST00000529224 EPS15P42566 896 aa16.66■□□□□ 0.26
SSH3-206ENST00000529224 CCDC85AQ96PX6 553 aaPredicted RBP16.66■□□□□ 0.26
SSH3-206ENST00000529224 ZNRF3Q9ULT6 936 aa16.66■□□□□ 0.26
SSH3-206ENST00000529224 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
SSH3-206ENST00000529224 LMOD1P29536 600 aaPredicted RBP16.65■□□□□ 0.26
SSH3-206ENST00000529224 GPSM2P81274 684 aa16.65■□□□□ 0.26
SSH3-206ENST00000529224 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
SSH3-206ENST00000529224 CNTROBQ8N137 903 aa16.65■□□□□ 0.26
SSH3-206ENST00000529224 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
SSH3-206ENST00000529224 CDC5LQ99459 802 aaKnown RBP16.65■□□□□ 0.26
SSH3-206ENST00000529224 RTL9Q8NET4 1388 aa16.64■□□□□ 0.26
SSH3-206ENST00000529224 TMEM88BA6NKF7 163 aa16.64■□□□□ 0.25
SSH3-206ENST00000529224 F6X3S4 739 aa16.64■□□□□ 0.25
SSH3-206ENST00000529224 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
SSH3-206ENST00000529224 CXCL9Q07325 125 aa16.64■□□□□ 0.25
SSH3-206ENST00000529224 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
SSH3-206ENST00000529224 WASHC4Q2M389 1173 aa16.64■□□□□ 0.25
SSH3-206ENST00000529224 EYA3Q99504 573 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms