RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 GPC2Q8N158 579 aa17.35■□□□□ 0.37
SNRNP35-205ENST00000529201 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
SNRNP35-205ENST00000529201 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
SNRNP35-205ENST00000529201 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 ZBTB38Q8NAP3 1195 aaPredicted RBP17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 RTFDC1Q9BY42 306 aaPredicted RBP17.34■□□□□ 0.37
SNRNP35-205ENST00000529201 CACNA1FO60840 1977 aa17.33■□□□□ 0.37
SNRNP35-205ENST00000529201 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
SNRNP35-205ENST00000529201 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
SNRNP35-205ENST00000529201 METTL22Q9BUU2 404 aaPredicted RBP17.33■□□□□ 0.36
SNRNP35-205ENST00000529201 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 PCCAP05165 728 aaPredicted RBP17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 DPP8Q6V1X1 898 aaPredicted RBP17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 KSR2Q6VAB6 950 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 MPNDQ8N594 471 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 MYD88Q99836 296 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 HACL1Q9UJ83 578 aa17.32■□□□□ 0.36
SNRNP35-205ENST00000529201 PNMA8AQ86V59 439 aaPredicted RBP17.31■□□□□ 0.36
SNRNP35-205ENST00000529201 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
SNRNP35-205ENST00000529201 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
SNRNP35-205ENST00000529201 CWC25Q9NXE8 425 aaPredicted RBP17.31■□□□□ 0.36
SNRNP35-205ENST00000529201 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
SNRNP35-205ENST00000529201 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
SNRNP35-205ENST00000529201 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
SNRNP35-205ENST00000529201 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
SNRNP35-205ENST00000529201 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
SNRNP35-205ENST00000529201 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
SNRNP35-205ENST00000529201 MAP3K2Q9Y2U5 619 aa17.29■□□□□ 0.36
SNRNP35-205ENST00000529201 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 EPHX2P34913 555 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 AOC3Q16853 763 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 TAF1P21675 1872 aa17.28■□□□□ 0.36
SNRNP35-205ENST00000529201 CDHR2Q9BYE9 1310 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 COL4A5P29400 1685 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 PDE8AO60658 829 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 CCDC152Q4G0S7 254 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 KLRG1Q96E93 195 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
SNRNP35-205ENST00000529201 RPS8P62241 208 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-205ENST00000529201 RTL5Q5HYW3 569 aaPredicted RBP17.26■□□□□ 0.35
SNRNP35-205ENST00000529201 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
SNRNP35-205ENST00000529201 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
SNRNP35-205ENST00000529201 VAMP4O75379 141 aa17.25■□□□□ 0.35
SNRNP35-205ENST00000529201 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
SNRNP35-205ENST00000529201 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
SNRNP35-205ENST00000529201 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
SNRNP35-205ENST00000529201 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 POTEIP0CG38 1075 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 POTEJP0CG39 1038 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 FLIIQ13045 1269 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 TNIP1Q15025 636 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 EYA3Q99504 573 aa17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
SNRNP35-205ENST00000529201 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
SNRNP35-205ENST00000529201 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
SNRNP35-205ENST00000529201 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
SNRNP35-205ENST00000529201 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
SNRNP35-205ENST00000529201 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
SNRNP35-205ENST00000529201 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
SNRNP35-205ENST00000529201 MYH3P11055 1940 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 NEURL1BA8MQ27 555 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 SCNN1DP51172 638 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 HTRA3P83110 453 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 CXCL9Q07325 125 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 FKBP5Q13451 457 aaPredicted RBP17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 G2E3Q7L622 706 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
SNRNP35-205ENST00000529201 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
SNRNP35-205ENST00000529201 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
SNRNP35-205ENST00000529201 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
SNRNP35-205ENST00000529201 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
SNRNP35-205ENST00000529201 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 H7C1W4 665 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 CTSWP56202 376 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 GPSM2P81274 684 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 LTBP1Q14766 1721 aa17.2■□□□□ 0.34
SNRNP35-205ENST00000529201 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
SNRNP35-205ENST00000529201 EPS15P42566 896 aa17.19■□□□□ 0.34
SNRNP35-205ENST00000529201 GCKRQ14397 625 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms