RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 STX6O43752 255 aa10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 F13A1P00488 732 aa10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 TUBBP07437 444 aa10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 RBM43Q6ZSC3 357 aaKnown RBP10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 CCDC186Q7Z3E2 898 aa10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 FBXO18Q8NFZ0 1043 aa10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 TSR2Q969E8 191 aaKnown RBP10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 TRIM5Q9C035 493 aa10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 MKRN1Q9UHC7 482 aaKnown RBP10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 CDK12Q9NYV4 1490 aaPredicted RBP10.65□□□□□ -0.7
CAPRIN1-206ENST00000528948 RCCD1A6NED2 376 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 GOLGA6L19H0YKK7 550 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 FECHP22830 423 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 PTGS1P23219 599 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 GUCY2CP25092 1073 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 NOP2P46087 812 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 PPP4CP60510 307 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 KRT85P78386 507 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 FBXO38Q6PIJ6 1188 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 LEKR1Q6ZMV7 388 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 RSPH14Q9UHP6 348 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 SMC3Q9UQE7 1217 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 PNPLA6Q8IY17 1366 aa10.64□□□□□ -0.71
CAPRIN1-206ENST00000528948 NPHP3Q7Z494 1330 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZCCHC11Q5TAX3 1644 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 DHX16O60231 1041 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 APPP05067 770 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 MAGEA9P43362 315 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 TYRO3Q06418 890 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 TRDNQ13061 729 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 SWT1Q5T5J6 900 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 SUGP1Q8IWZ8 645 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
CAPRIN1-206ENST00000528948 PHLPP2Q6ZVD8 1323 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 GOLGA6L9A6NEM1 432 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 ERICH4A6NGS2 130 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 MYO1CO00159 1063 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 VAMP4O75379 141 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZSCAN26Q16670 478 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 ACBD3Q9H3P7 528 aa10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZNF215Q9UL58 517 aaPredicted RBP10.62□□□□□ -0.71
CAPRIN1-206ENST00000528948 EFCAB8A8MWE9 144 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 IRF6O14896 467 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 DIAPH1O60610 1272 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 IGSF3O75054 1194 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 GADD45BO75293 160 aaPredicted RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 PNMA6AP0CW24 399 aaPredicted RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 TUBB2AQ13885 445 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 TTC31Q49AM3 519 aaPredicted RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 SRLQ86TD4 932 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 LRRC8AQ8IWT6 810 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 SIRT2Q8IXJ6 389 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 C17orf53Q8N3J3 647 aaPredicted RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 SPC24Q8NBT2 197 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 UBXN4Q92575 508 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 DDX11Q96FC9 970 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 TUBB2BQ9BVA1 445 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 UBXN6Q9BZV1 441 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 NAT10Q9H0A0 1025 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 HDAC5Q9UQL6 1122 aa10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 LRRFIP2Q9Y608 721 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-206ENST00000528948 GLI2P10070 1586 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 MYO1BO43795 1136 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 GIGYF1O75420 1035 aaPredicted RBP10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZMYND10O75800 440 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 ZRANB2O95218 330 aaKnown RBP eCLIP10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 BARGINQ6ZT62 677 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 CHMP4CQ96CF2 233 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 CEP89Q96ST8 783 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 FHOD1Q9Y613 1164 aa10.6□□□□□ -0.71
CAPRIN1-206ENST00000528948 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 PLCH2O75038 1416 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 ATP10DQ9P241 1426 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 CCDC196A0A1B0GTZ2 297 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 FAM177BA6PVY3 158 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 CPP00450 1065 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 HSPA4P34932 840 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 ACTN2P35609 894 aa10.59□□□□□ -0.71
CAPRIN1-206ENST00000528948 PDE1AP54750 535 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms