RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
TRIM3-207ENST00000528932 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
TRIM3-207ENST00000528932 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
TRIM3-207ENST00000528932 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
TRIM3-207ENST00000528932 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 AOC2O75106 756 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 BBOX1O75936 387 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 BCL2L13Q9BXK5 485 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
TRIM3-207ENST00000528932 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
TRIM3-207ENST00000528932 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 TSKSQ9UJT2 592 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
TRIM3-207ENST00000528932 CELF2O95319 508 aaKnown RBP16.4■□□□□ 0.22
TRIM3-207ENST00000528932 GRAPQ13588 217 aa16.4■□□□□ 0.22
TRIM3-207ENST00000528932 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
TRIM3-207ENST00000528932 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
TRIM3-207ENST00000528932 BABAM1Q9NWV8 329 aa16.4■□□□□ 0.22
TRIM3-207ENST00000528932 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
TRIM3-207ENST00000528932 ECE1P42892 770 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 RALBP1Q15311 655 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
TRIM3-207ENST00000528932 TRPM4Q8TD43 1214 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 COL4A1P02462 1669 aa16.39■□□□□ 0.21
TRIM3-207ENST00000528932 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
TRIM3-207ENST00000528932 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
TRIM3-207ENST00000528932 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
TRIM3-207ENST00000528932 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
TRIM3-207ENST00000528932 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
TRIM3-207ENST00000528932 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
TRIM3-207ENST00000528932 POLR2AP24928 1970 aaKnown RBP16.38■□□□□ 0.21
TRIM3-207ENST00000528932 CHL1O00533 1208 aa16.37■□□□□ 0.21
TRIM3-207ENST00000528932 TNIP1Q15025 636 aa16.37■□□□□ 0.21
TRIM3-207ENST00000528932 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
TRIM3-207ENST00000528932 ABHD8Q96I13 439 aa16.37■□□□□ 0.21
TRIM3-207ENST00000528932 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
TRIM3-207ENST00000528932 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
TRIM3-207ENST00000528932 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
TRIM3-207ENST00000528932 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
TRIM3-207ENST00000528932 DLK2Q6UY11 383 aa16.36■□□□□ 0.21
TRIM3-207ENST00000528932 CELF1Q92879 486 aaKnown RBP16.36■□□□□ 0.21
TRIM3-207ENST00000528932 DBNDD1Q9H9R9 158 aa16.36■□□□□ 0.21
TRIM3-207ENST00000528932 CNOT7Q9UIV1 285 aaKnown RBP16.36■□□□□ 0.21
TRIM3-207ENST00000528932 CASP8AP2Q9UKL3 1982 aa16.35■□□□□ 0.21
TRIM3-207ENST00000528932 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRIM3-207ENST00000528932 ANKRD13DQ6ZTN6 518 aa16.35■□□□□ 0.21
TRIM3-207ENST00000528932 SAPCD2Q86UD0 394 aa16.35■□□□□ 0.21
TRIM3-207ENST00000528932 MICALL2Q8IY33 904 aa16.35■□□□□ 0.21
TRIM3-207ENST00000528932 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
TRIM3-207ENST00000528932 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
TRIM3-207ENST00000528932 NSFL1CQ9UNZ2 370 aaKnown RBP16.35■□□□□ 0.21
TRIM3-207ENST00000528932 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
TRIM3-207ENST00000528932 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
TRIM3-207ENST00000528932 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
TRIM3-207ENST00000528932 USP48Q86UV5 1035 aa16.34■□□□□ 0.21
TRIM3-207ENST00000528932 H7C1D1 291 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 PSMD14O00487 310 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 GPSM2P81274 684 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 DOK7Q18PE1 504 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
TRIM3-207ENST00000528932 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.2
TRIM3-207ENST00000528932 CCDC85CA6NKD9 419 aa16.32■□□□□ 0.2
TRIM3-207ENST00000528932 TBC1D10BQ4KMP7 808 aaPredicted RBP16.32■□□□□ 0.2
TRIM3-207ENST00000528932 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
TRIM3-207ENST00000528932 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
TRIM3-207ENST00000528932 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
TRIM3-207ENST00000528932 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
TRIM3-207ENST00000528932 PGAP2Q9UHJ9 254 aa16.32■□□□□ 0.2
TRIM3-207ENST00000528932 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
TRIM3-207ENST00000528932 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
TRIM3-207ENST00000528932 EGFRP00533 1210 aa16.31■□□□□ 0.2
TRIM3-207ENST00000528932 MAP2K2P36507 400 aa16.31■□□□□ 0.2
TRIM3-207ENST00000528932 TMC4Q7Z404 712 aa16.31■□□□□ 0.2
TRIM3-207ENST00000528932 ZC3H15Q8WU90 426 aaKnown RBP16.31■□□□□ 0.2
TRIM3-207ENST00000528932 SCN9AQ15858 1988 aa16.31■□□□□ 0.2
TRIM3-207ENST00000528932 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
TRIM3-207ENST00000528932 ECE2O60344 883 aa16.3■□□□□ 0.2
TRIM3-207ENST00000528932 SLC34A2O95436 690 aa16.3■□□□□ 0.2
TRIM3-207ENST00000528932 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
TRIM3-207ENST00000528932 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
TRIM3-207ENST00000528932 JARID2Q92833 1246 aaPredicted RBP16.3■□□□□ 0.2
TRIM3-207ENST00000528932 ZIC5Q96T25 663 aa16.3■□□□□ 0.2
TRIM3-207ENST00000528932 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
TRIM3-207ENST00000528932 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
TRIM3-207ENST00000528932 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
TRIM3-207ENST00000528932 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
TRIM3-207ENST00000528932 SEC31BQ9NQW1 1179 aa16.29■□□□□ 0.2
TRIM3-207ENST00000528932 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
TRIM3-207ENST00000528932 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
TRIM3-207ENST00000528932 ADM5C9JUS6 153 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms