RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TRIM26Q12899 539 aaPredicted RBP10.4□□□□□ -0.74
PCF11-202ENST00000528336 LYPD4Q6UWN0 246 aa10.4□□□□□ -0.74
PCF11-202ENST00000528336 SND1Q7KZF4 910 aaKnown RBP eCLIP10.4□□□□□ -0.74
PCF11-202ENST00000528336 ZNF438Q7Z4V0 828 aa10.4□□□□□ -0.74
PCF11-202ENST00000528336 GOLGA6L1Q8N7Z2 621 aa10.39□□□□□ -0.75
PCF11-202ENST00000528336 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
PCF11-202ENST00000528336 EFCC1Q9HA90 598 aa10.39□□□□□ -0.75
PCF11-202ENST00000528336 AVENQ9NQS1 362 aaPredicted RBP10.39□□□□□ -0.75
PCF11-202ENST00000528336 GDF2Q9UK05 429 aaPredicted RBP10.39□□□□□ -0.75
PCF11-202ENST00000528336 SIN3BO75182 1162 aa10.38□□□□□ -0.75
PCF11-202ENST00000528336 CELA2BP08218 269 aaPredicted RBP10.38□□□□□ -0.75
PCF11-202ENST00000528336 MAPK1P28482 360 aa10.38□□□□□ -0.75
PCF11-202ENST00000528336 TTC39BQ5VTQ0 682 aaPredicted RBP10.38□□□□□ -0.75
PCF11-202ENST00000528336 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
PCF11-202ENST00000528336 GALNT6Q8NCL4 622 aa10.38□□□□□ -0.75
PCF11-202ENST00000528336 UBE2OQ9C0C9 1292 aaKnown RBP10.38□□□□□ -0.75
PCF11-202ENST00000528336 MMP20O60882 483 aa10.37□□□□□ -0.75
PCF11-202ENST00000528336 BCRP11274 1271 aa10.37□□□□□ -0.75
PCF11-202ENST00000528336 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
PCF11-202ENST00000528336 GJD3Q8N144 294 aa10.37□□□□□ -0.75
PCF11-202ENST00000528336 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
PCF11-202ENST00000528336 DCTN4Q9UJW0 460 aa10.37□□□□□ -0.75
PCF11-202ENST00000528336 MAP3K6O95382 1288 aa10.36□□□□□ -0.75
PCF11-202ENST00000528336 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
PCF11-202ENST00000528336 PDE12Q6L8Q7 609 aaKnown RBP10.36□□□□□ -0.75
PCF11-202ENST00000528336 SLCO4C1Q6ZQN7 724 aa10.36□□□□□ -0.75
PCF11-202ENST00000528336 SVOPQ8N4V2 548 aa10.36□□□□□ -0.75
PCF11-202ENST00000528336 EDARADDQ8WWZ3 215 aa10.36□□□□□ -0.75
PCF11-202ENST00000528336 MARSP56192 900 aaKnown RBP10.35□□□□□ -0.75
PCF11-202ENST00000528336 MAP3K10Q02779 954 aa10.35□□□□□ -0.75
PCF11-202ENST00000528336 MLLT1Q03111 559 aaPredicted RBP10.35□□□□□ -0.75
PCF11-202ENST00000528336 EHHADHQ08426 723 aa10.35□□□□□ -0.75
PCF11-202ENST00000528336 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
PCF11-202ENST00000528336 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
PCF11-202ENST00000528336 DNAJB12Q9NXW2 375 aaKnown RBP10.35□□□□□ -0.75
PCF11-202ENST00000528336 OIP5O43482 229 aa10.34□□□□□ -0.75
PCF11-202ENST00000528336 PSAPP07602 524 aa10.34□□□□□ -0.75
PCF11-202ENST00000528336 EPXP11678 715 aa10.34□□□□□ -0.75
PCF11-202ENST00000528336 PDE3BQ13370 1112 aa10.34□□□□□ -0.75
PCF11-202ENST00000528336 CITED4Q96RK1 184 aa10.34□□□□□ -0.75
PCF11-202ENST00000528336 ABI2Q9NYB9 513 aaPredicted RBP10.34□□□□□ -0.75
PCF11-202ENST00000528336 TLR7Q9NYK1 1049 aaKnown RBP10.34□□□□□ -0.75
PCF11-202ENST00000528336 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
PCF11-202ENST00000528336 ELOA3DA6NLF2 546 aaPredicted RBP10.33□□□□□ -0.76
PCF11-202ENST00000528336 ADH7P40394 386 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 INSM1Q01101 510 aaPredicted RBP10.33□□□□□ -0.76
PCF11-202ENST00000528336 ELOA3BQ3SY89 546 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 XKR5Q6UX68 686 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 ELOA3Q8NG57 546 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 TNFRSF25Q93038 417 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 RBCK1Q9BYM8 510 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 CNTN3Q9P232 1028 aa10.33□□□□□ -0.76
PCF11-202ENST00000528336 SHISA8B8ZZ34 492 aa10.32□□□□□ -0.76
PCF11-202ENST00000528336 CYP2E1P05181 493 aaPredicted RBP10.32□□□□□ -0.76
PCF11-202ENST00000528336 ALAS2P22557 587 aa10.32□□□□□ -0.76
PCF11-202ENST00000528336 AMPD1P23109 780 aa10.32□□□□□ -0.76
PCF11-202ENST00000528336 LORP23490 312 aaPredicted RBP10.32□□□□□ -0.76
PCF11-202ENST00000528336 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
PCF11-202ENST00000528336 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
PCF11-202ENST00000528336 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
PCF11-202ENST00000528336 FOXD3Q9UJU5 478 aaPredicted RBP10.32□□□□□ -0.76
PCF11-202ENST00000528336 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 ZBTB42B2RXF5 422 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 TNFRSF21O75509 655 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 PLAURQ03405 335 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 C1orf127Q8N9H9 656 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 NEDD1Q8NHV4 660 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 NSUN5Q96P11 429 aaKnown RBP10.31□□□□□ -0.76
PCF11-202ENST00000528336 FAM129BQ96TA1 746 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 SLC6A14Q9UN76 642 aa10.31□□□□□ -0.76
PCF11-202ENST00000528336 PHACTR2O75167 634 aa10.3□□□□□ -0.76
PCF11-202ENST00000528336 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
PCF11-202ENST00000528336 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
PCF11-202ENST00000528336 PHF20L1A8MW92 1017 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 J3QW42 95 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 GPR182O15218 404 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 CPB1P15086 417 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 CES1P23141 567 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 CCDC27Q2M243 656 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 FAM35AQ86V20 835 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 MDFIQ99750 246 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 ENAMQ9NRM1 1142 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 KANSL3Q9P2N6 904 aa10.29□□□□□ -0.76
PCF11-202ENST00000528336 NRLP54845 237 aa10.28□□□□□ -0.76
PCF11-202ENST00000528336 PCSK7Q16549 785 aa10.28□□□□□ -0.76
PCF11-202ENST00000528336 COL13A1Q5TAT6 717 aaPredicted RBP10.28□□□□□ -0.76
PCF11-202ENST00000528336 TMCO4Q5TGY1 634 aa10.28□□□□□ -0.76
PCF11-202ENST00000528336 DMRTB1Q96MA1 342 aa10.28□□□□□ -0.76
PCF11-202ENST00000528336 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
PCF11-202ENST00000528336 LRRC4BQ9NT99 713 aa10.28□□□□□ -0.76
PCF11-202ENST00000528336 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.28□□□□□ -0.76
PCF11-202ENST00000528336 LOC102724428A0A0B4J2F2 783 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 SIK1P57059 783 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 GPLD1P80108 840 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 HYAL2Q12891 473 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 ORC1Q13415 861 aa10.27□□□□□ -0.77
PCF11-202ENST00000528336 CHSY3Q70JA7 882 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms