RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 SUCLG2Q96I99 432 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 CCDC85AQ96PX6 553 aaPredicted RBP16.32■□□□□ 0.2
SCN3B-205ENST00000528267 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
SCN3B-205ENST00000528267 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 PLIN1O60240 522 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 PDE8AO60658 829 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 FOXO4P98177 505 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 GPR162Q16538 588 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 SEC31BQ9NQW1 1179 aa16.31■□□□□ 0.2
SCN3B-205ENST00000528267 CHD4Q14839 1912 aa16.3■□□□□ 0.2
SCN3B-205ENST00000528267 PRELPP51888 382 aa16.3■□□□□ 0.2
SCN3B-205ENST00000528267 CTSWP56202 376 aa16.3■□□□□ 0.2
SCN3B-205ENST00000528267 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
SCN3B-205ENST00000528267 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
SCN3B-205ENST00000528267 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
SCN3B-205ENST00000528267 CELF1Q92879 486 aaKnown RBP16.3■□□□□ 0.2
SCN3B-205ENST00000528267 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
SCN3B-205ENST00000528267 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
SCN3B-205ENST00000528267 C21orf2O43822 256 aa16.29■□□□□ 0.2
SCN3B-205ENST00000528267 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
SCN3B-205ENST00000528267 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
SCN3B-205ENST00000528267 CRAMP1Q96RY5 1269 aa16.29■□□□□ 0.2
SCN3B-205ENST00000528267 GREM2Q9H772 168 aa16.29■□□□□ 0.2
SCN3B-205ENST00000528267 CSF1RP07333 972 aa16.28■□□□□ 0.2
SCN3B-205ENST00000528267 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
SCN3B-205ENST00000528267 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
SCN3B-205ENST00000528267 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
SCN3B-205ENST00000528267 MEIS3Q99687 375 aa16.28■□□□□ 0.2
SCN3B-205ENST00000528267 NFKBIEO00221 500 aa16.27■□□□□ 0.2
SCN3B-205ENST00000528267 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.2
SCN3B-205ENST00000528267 RASSF7Q02833 373 aa16.27■□□□□ 0.2
SCN3B-205ENST00000528267 GRAPQ13588 217 aa16.27■□□□□ 0.2
SCN3B-205ENST00000528267 FAM161AQ3B820 660 aa16.27■□□□□ 0.2
SCN3B-205ENST00000528267 ANKRD44Q8N8A2 993 aa16.27■□□□□ 0.2
SCN3B-205ENST00000528267 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.2
SCN3B-205ENST00000528267 PANK1Q8TE04 598 aa16.27■□□□□ 0.2
SCN3B-205ENST00000528267 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.2
SCN3B-205ENST00000528267 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
SCN3B-205ENST00000528267 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
SCN3B-205ENST00000528267 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
SCN3B-205ENST00000528267 COL4A5P29400 1685 aa16.25■□□□□ 0.19
SCN3B-205ENST00000528267 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
SCN3B-205ENST00000528267 DDX46Q7L014 1031 aaKnown RBP16.25■□□□□ 0.19
SCN3B-205ENST00000528267 DZIP1LQ8IYY4 767 aaKnown RBP16.25■□□□□ 0.19
SCN3B-205ENST00000528267 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
SCN3B-205ENST00000528267 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
SCN3B-205ENST00000528267 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
SCN3B-205ENST00000528267 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
SCN3B-205ENST00000528267 LMBR1LQ6UX01 489 aa16.24■□□□□ 0.19
SCN3B-205ENST00000528267 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
SCN3B-205ENST00000528267 ATP6V0A2Q9Y487 856 aa16.23■□□□□ 0.19
SCN3B-205ENST00000528267 GRIN3BO60391 1043 aa16.22■□□□□ 0.19
SCN3B-205ENST00000528267 ITGA6P23229 1130 aa16.22■□□□□ 0.19
SCN3B-205ENST00000528267 LRRFIP2Q9Y608 721 aaKnown RBP16.22■□□□□ 0.19
SCN3B-205ENST00000528267 BBOX1O75936 387 aa16.21■□□□□ 0.19
SCN3B-205ENST00000528267 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
SCN3B-205ENST00000528267 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
SCN3B-205ENST00000528267 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
SCN3B-205ENST00000528267 ZBTB7BO15156 539 aaPredicted RBP16.2■□□□□ 0.18
SCN3B-205ENST00000528267 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
SCN3B-205ENST00000528267 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
SCN3B-205ENST00000528267 RFX5P48382 616 aaPredicted RBP16.2■□□□□ 0.18
SCN3B-205ENST00000528267 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
SCN3B-205ENST00000528267 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
SCN3B-205ENST00000528267 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
SCN3B-205ENST00000528267 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
SCN3B-205ENST00000528267 WTIPA6NIX2 430 aaPredicted RBP16.19■□□□□ 0.18
SCN3B-205ENST00000528267 C1orf115Q9H7X2 142 aa16.19■□□□□ 0.18
SCN3B-205ENST00000528267 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
SCN3B-205ENST00000528267 CHMP3Q9Y3E7 222 aa16.19■□□□□ 0.18
SCN3B-205ENST00000528267 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
SCN3B-205ENST00000528267 GPSM2P81274 684 aa16.18■□□□□ 0.18
SCN3B-205ENST00000528267 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
SCN3B-205ENST00000528267 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
SCN3B-205ENST00000528267 KLHDC4Q8TBB5 520 aa16.18■□□□□ 0.18
SCN3B-205ENST00000528267 FKBP4Q02790 459 aaKnown RBP eCLIP16.17■□□□□ 0.18
SCN3B-205ENST00000528267 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-205ENST00000528267 PUS3Q9BZE2 481 aaKnown RBP16.17■□□□□ 0.18
SCN3B-205ENST00000528267 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
SCN3B-205ENST00000528267 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-205ENST00000528267 ZNF646O15015 1829 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-205ENST00000528267 ANKRD18BA2A2Z9 1011 aa16.16■□□□□ 0.18
SCN3B-205ENST00000528267 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
SCN3B-205ENST00000528267 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
SCN3B-205ENST00000528267 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
SCN3B-205ENST00000528267 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
SCN3B-205ENST00000528267 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
SCN3B-205ENST00000528267 PSMD1Q99460 953 aa16.16■□□□□ 0.18
SCN3B-205ENST00000528267 RTFDC1Q9BY42 306 aaPredicted RBP16.16■□□□□ 0.18
SCN3B-205ENST00000528267 BSDC1Q9NW68 430 aaPredicted RBP16.16■□□□□ 0.18
SCN3B-205ENST00000528267 MINPP1Q9UNW1 487 aa16.16■□□□□ 0.18
SCN3B-205ENST00000528267 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
SCN3B-205ENST00000528267 GNAI3P08754 354 aa16.15■□□□□ 0.18
SCN3B-205ENST00000528267 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
SCN3B-205ENST00000528267 CC2D2BQ6DHV5 1058 aa16.15■□□□□ 0.18
SCN3B-205ENST00000528267 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
SCN3B-205ENST00000528267 RTKN2Q8IZC4 609 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms