RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNF428Q96B54 188 aa15.49■□□□□ 0.07
TRAPPC4-209ENST00000528230 ZNF277Q9NRM2 450 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-209ENST00000528230 WDR90Q96KV7 1748 aa15.48■□□□□ 0.07
TRAPPC4-209ENST00000528230 CDHR2Q9BYE9 1310 aa15.48■□□□□ 0.07
TRAPPC4-209ENST00000528230 VEGFAP15692 232 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-209ENST00000528230 FKBP5Q13451 457 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-209ENST00000528230 RTL5Q5HYW3 569 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-209ENST00000528230 DIEXFQ68CQ4 756 aaKnown RBP15.48■□□□□ 0.07
TRAPPC4-209ENST00000528230 NEURL1BA8MQ27 555 aa15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 PDE8AO60658 829 aa15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 SLFN5Q08AF3 891 aa15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 SUPT20HQ8NEM7 779 aa15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 DNAAF4Q8WXU2 420 aa15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-209ENST00000528230 FZD9O00144 591 aa15.46■□□□□ 0.07
TRAPPC4-209ENST00000528230 LINS1Q8NG48 757 aa15.46■□□□□ 0.07
TRAPPC4-209ENST00000528230 JDP2Q8WYK2 163 aa15.46■□□□□ 0.07
TRAPPC4-209ENST00000528230 MYH3P11055 1940 aa15.46■□□□□ 0.07
TRAPPC4-209ENST00000528230 H7C1W4 665 aa15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 RPS8P62241 208 aaKnown RBP15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 CWF19L2Q2TBE0 894 aaKnown RBP15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 MPNDQ8N594 471 aa15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 LRRC37AA6NMS7 1700 aa15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 SCN4AP35499 1836 aa15.45■□□□□ 0.06
TRAPPC4-209ENST00000528230 POTECB2RU33 542 aa15.44■□□□□ 0.06
TRAPPC4-209ENST00000528230 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-209ENST00000528230 GCKRQ14397 625 aa15.44■□□□□ 0.06
TRAPPC4-209ENST00000528230 DPP8Q6V1X1 898 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-209ENST00000528230 TRMT2AQ8IZ69 625 aaKnown RBP15.44■□□□□ 0.06
TRAPPC4-209ENST00000528230 CELF1Q92879 486 aaKnown RBP15.44■□□□□ 0.06
TRAPPC4-209ENST00000528230 FSTL1Q12841 308 aa15.43■□□□□ 0.06
TRAPPC4-209ENST00000528230 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
TRAPPC4-209ENST00000528230 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-209ENST00000528230 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-209ENST00000528230 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
TRAPPC4-209ENST00000528230 HSPA6P17066 643 aa15.42■□□□□ 0.06
TRAPPC4-209ENST00000528230 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-209ENST00000528230 SLC51AQ86UW1 340 aa15.42■□□□□ 0.06
TRAPPC4-209ENST00000528230 MIER1Q8N108 512 aa15.42■□□□□ 0.06
TRAPPC4-209ENST00000528230 PLA2G12BQ9BX93 195 aa15.42■□□□□ 0.06
TRAPPC4-209ENST00000528230 IQCA1LA6NCM1 817 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 CASP7P55210 303 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 CTSWP56202 376 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 BEND3Q5T5X7 828 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 UBE3BQ7Z3V4 1068 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 NIM1KQ8IY84 436 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 GPC2Q8N158 579 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 CDCA7LQ96GN5 454 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 SEC31BQ9NQW1 1179 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 ZNF541Q9H0D2 1346 aa15.41■□□□□ 0.06
TRAPPC4-209ENST00000528230 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 F6X3S4 739 aa15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 AOC3Q16853 763 aa15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 SMC1BQ8NDV3 1235 aa15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 COL4A5P29400 1685 aa15.4■□□□□ 0.06
TRAPPC4-209ENST00000528230 COL4A1P02462 1669 aa15.39■□□□□ 0.05
TRAPPC4-209ENST00000528230 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
TRAPPC4-209ENST00000528230 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
TRAPPC4-209ENST00000528230 CDC5LQ99459 802 aaKnown RBP15.39■□□□□ 0.05
TRAPPC4-209ENST00000528230 PODXL2Q9NZ53 605 aa15.39■□□□□ 0.05
TRAPPC4-209ENST00000528230 ZNRF3Q9ULT6 936 aa15.39■□□□□ 0.05
TRAPPC4-209ENST00000528230 LTBP1Q14766 1721 aa15.38■□□□□ 0.05
TRAPPC4-209ENST00000528230 DUOX1Q9NRD9 1551 aa15.38■□□□□ 0.05
TRAPPC4-209ENST00000528230 ALDH1L1O75891 902 aa15.38■□□□□ 0.05
TRAPPC4-209ENST00000528230 CSF1RP07333 972 aa15.38■□□□□ 0.05
TRAPPC4-209ENST00000528230 GPSM2P81274 684 aa15.38■□□□□ 0.05
TRAPPC4-209ENST00000528230 PTPRCP08575 1304 aa15.38■□□□□ 0.05
TRAPPC4-209ENST00000528230 WASHC4Q2M389 1173 aa15.37■□□□□ 0.05
TRAPPC4-209ENST00000528230 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
TRAPPC4-209ENST00000528230 CCDC85AQ96PX6 553 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-209ENST00000528230 EYA3Q99504 573 aa15.37■□□□□ 0.05
TRAPPC4-209ENST00000528230 GREM2Q9H772 168 aa15.37■□□□□ 0.05
TRAPPC4-209ENST00000528230 HACL1Q9UJ83 578 aa15.37■□□□□ 0.05
TRAPPC4-209ENST00000528230 C6orf229H3BNL8 230 aa15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 APLP1P51693 650 aa15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 TBC1D16Q8TBP0 767 aa15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 BSDC1Q9NW68 430 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
TRAPPC4-209ENST00000528230 GRM8O00222 908 aa15.35■□□□□ 0.05
TRAPPC4-209ENST00000528230 CXCL9Q07325 125 aa15.35■□□□□ 0.05
TRAPPC4-209ENST00000528230 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
TRAPPC4-209ENST00000528230 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC4-209ENST00000528230 ANKIB1Q9P2G1 1089 aa15.35■□□□□ 0.05
TRAPPC4-209ENST00000528230 GJA3Q9Y6H8 435 aa15.35■□□□□ 0.05
TRAPPC4-209ENST00000528230 EPHX2P34913 555 aa15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 TNIP1Q15025 636 aa15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 LDHDQ86WU2 507 aa15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms