RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
SCN3B-204ENST00000527836 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
SCN3B-204ENST00000527836 SNED1Q8TER0 1413 aa15.96■□□□□ 0.15
SCN3B-204ENST00000527836 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
SCN3B-204ENST00000527836 MYD88Q99836 296 aa15.96■□□□□ 0.15
SCN3B-204ENST00000527836 VPS33BQ9H267 617 aa15.96■□□□□ 0.15
SCN3B-204ENST00000527836 DDX60Q8IY21 1712 aaKnown RBP15.96■□□□□ 0.15
SCN3B-204ENST00000527836 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
SCN3B-204ENST00000527836 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
SCN3B-204ENST00000527836 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
SCN3B-204ENST00000527836 SALL2Q9Y467 1007 aaPredicted RBP15.95■□□□□ 0.14
SCN3B-204ENST00000527836 TRIM28Q13263 835 aaKnown RBP15.94■□□□□ 0.14
SCN3B-204ENST00000527836 SF3B3Q15393 1217 aaKnown RBP15.93■□□□□ 0.14
SCN3B-204ENST00000527836 TWISTNBQ3B726 338 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-204ENST00000527836 TSPYL6Q8N831 410 aa15.93■□□□□ 0.14
SCN3B-204ENST00000527836 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-204ENST00000527836 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
SCN3B-204ENST00000527836 CREBZFQ9NS37 354 aa15.93■□□□□ 0.14
SCN3B-204ENST00000527836 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
SCN3B-204ENST00000527836 ZNRF3Q9ULT6 936 aa15.93■□□□□ 0.14
SCN3B-204ENST00000527836 COL4A5P29400 1685 aa15.92■□□□□ 0.14
SCN3B-204ENST00000527836 NEXNQ0ZGT2 675 aa15.92■□□□□ 0.14
SCN3B-204ENST00000527836 RTFDC1Q9BY42 306 aaPredicted RBP15.92■□□□□ 0.14
SCN3B-204ENST00000527836 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
SCN3B-204ENST00000527836 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
SCN3B-204ENST00000527836 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
SCN3B-204ENST00000527836 TNIP1Q15025 636 aa15.91■□□□□ 0.14
SCN3B-204ENST00000527836 MAP1SQ66K74 1059 aaPredicted RBP15.91■□□□□ 0.14
SCN3B-204ENST00000527836 CNTROBQ8N137 903 aa15.91■□□□□ 0.14
SCN3B-204ENST00000527836 JMYQ8N9B5 988 aa15.91■□□□□ 0.14
SCN3B-204ENST00000527836 CELF1Q92879 486 aaKnown RBP15.91■□□□□ 0.14
SCN3B-204ENST00000527836 METTL22Q9BUU2 404 aaPredicted RBP15.91■□□□□ 0.14
SCN3B-204ENST00000527836 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
SCN3B-204ENST00000527836 IL16Q14005 1332 aa15.91■□□□□ 0.14
SCN3B-204ENST00000527836 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 RPS8P62241 208 aaKnown RBP15.9■□□□□ 0.14
SCN3B-204ENST00000527836 KIAA2012Q0VF49 1180 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 WASHC4Q2M389 1173 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 CCDC152Q4G0S7 254 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 CIAPIN1Q6FI81 312 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 FAM9BQ8IZU0 186 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
SCN3B-204ENST00000527836 MKRN1Q9UHC7 482 aaKnown RBP15.9■□□□□ 0.14
SCN3B-204ENST00000527836 TMEM88BA6NKF7 163 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 G3V3G9 751 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 PDE8AO60658 829 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 PCCAP05165 728 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-204ENST00000527836 EPS15P42566 896 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 SCNN1DP51172 638 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 CXCL9Q07325 125 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-204ENST00000527836 CACNA1FO60840 1977 aa15.89■□□□□ 0.13
SCN3B-204ENST00000527836 RIMBP2O15034 1052 aa15.88■□□□□ 0.13
SCN3B-204ENST00000527836 RAD17O75943 681 aa15.88■□□□□ 0.13
SCN3B-204ENST00000527836 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
SCN3B-204ENST00000527836 USP50Q70EL3 339 aaPredicted RBP15.88■□□□□ 0.13
SCN3B-204ENST00000527836 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
SCN3B-204ENST00000527836 EYA3Q99504 573 aa15.88■□□□□ 0.13
SCN3B-204ENST00000527836 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
SCN3B-204ENST00000527836 PASKQ96RG2 1323 aa15.88■□□□□ 0.13
SCN3B-204ENST00000527836 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
SCN3B-204ENST00000527836 ITGBL1O95965 494 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-204ENST00000527836 GMPSP49915 693 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-204ENST00000527836 GPSM2P81274 684 aa15.87■□□□□ 0.13
SCN3B-204ENST00000527836 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
SCN3B-204ENST00000527836 ADARB2Q9NS39 739 aaKnown RBP15.87■□□□□ 0.13
SCN3B-204ENST00000527836 GPRC5DQ9NZD1 345 aa15.87■□□□□ 0.13
SCN3B-204ENST00000527836 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
SCN3B-204ENST00000527836 FKBP5Q13451 457 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-204ENST00000527836 IFFO2Q5TF58 517 aa15.86■□□□□ 0.13
SCN3B-204ENST00000527836 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
SCN3B-204ENST00000527836 SEC31BQ9NQW1 1179 aa15.86■□□□□ 0.13
SCN3B-204ENST00000527836 ABT1Q9ULW3 272 aaKnown RBP15.86■□□□□ 0.13
SCN3B-204ENST00000527836 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
SCN3B-204ENST00000527836 MYH3P11055 1940 aa15.86■□□□□ 0.13
SCN3B-204ENST00000527836 LTBP1Q14766 1721 aa15.85■□□□□ 0.13
SCN3B-204ENST00000527836 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
SCN3B-204ENST00000527836 ZC3H12CQ9C0D7 883 aaKnown RBP15.85■□□□□ 0.13
SCN3B-204ENST00000527836 DBNDD1Q9H9R9 158 aa15.85■□□□□ 0.13
SCN3B-204ENST00000527836 H7C1D1 291 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 UFL1O94874 794 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 HSPA1AP0DMV8 641 aaKnown RBP15.84■□□□□ 0.13
SCN3B-204ENST00000527836 HSPA1BP0DMV9 641 aaKnown RBP15.84■□□□□ 0.13
SCN3B-204ENST00000527836 FLIIQ13045 1269 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
SCN3B-204ENST00000527836 G2E3Q7L622 706 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 TBC1D16Q8TBP0 767 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 MYH16Q9H6N6 1097 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 POLLQ9UGP5 575 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 GGA1Q9UJY5 639 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 CDHR2Q9BYE9 1310 aa15.84■□□□□ 0.13
SCN3B-204ENST00000527836 DUOX1Q9NRD9 1551 aa15.83■□□□□ 0.13
SCN3B-204ENST00000527836 IGKV5-2P06315 115 aa15.83■□□□□ 0.12
SCN3B-204ENST00000527836 CTSWP56202 376 aa15.83■□□□□ 0.12
SCN3B-204ENST00000527836 EXOSC9Q06265 439 aaKnown RBP15.83■□□□□ 0.12
SCN3B-204ENST00000527836 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
SCN3B-204ENST00000527836 CNOT7Q9UIV1 285 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms