RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 EIF6P56537 245 aaKnown RBP24.78■■□□□ 1.56
CAPN1-211ENST00000527739 PASKQ96RG2 1323 aa24.78■■□□□ 1.56
CAPN1-211ENST00000527739 SNED1Q8TER0 1413 aa24.78■■□□□ 1.56
CAPN1-211ENST00000527739 FZD9O00144 591 aa24.77■■□□□ 1.56
CAPN1-211ENST00000527739 PPIP5K2O43314 1243 aa24.77■■□□□ 1.56
CAPN1-211ENST00000527739 NCBP3Q53F19 620 aaKnown RBP24.77■■□□□ 1.56
CAPN1-211ENST00000527739 DPP8Q6V1X1 898 aaPredicted RBP24.77■■□□□ 1.56
CAPN1-211ENST00000527739 LDHDQ86WU2 507 aa24.77■■□□□ 1.56
CAPN1-211ENST00000527739 SP8Q8IXZ3 490 aa24.77■■□□□ 1.56
CAPN1-211ENST00000527739 GJA3Q9Y6H8 435 aa24.77■■□□□ 1.56
CAPN1-211ENST00000527739 EAPPQ56P03 285 aaPredicted RBP24.76■■□□□ 1.55
CAPN1-211ENST00000527739 WDR63Q8IWG1 891 aa24.76■■□□□ 1.55
CAPN1-211ENST00000527739 NIM1KQ8IY84 436 aa24.76■■□□□ 1.55
CAPN1-211ENST00000527739 MPNDQ8N594 471 aa24.76■■□□□ 1.55
CAPN1-211ENST00000527739 ZBTB38Q8NAP3 1195 aaPredicted RBP24.76■■□□□ 1.55
CAPN1-211ENST00000527739 JARID2Q92833 1246 aaPredicted RBP24.76■■□□□ 1.55
CAPN1-211ENST00000527739 METTL22Q9BUU2 404 aaPredicted RBP24.76■■□□□ 1.55
CAPN1-211ENST00000527739 MAP3K2Q9Y2U5 619 aa24.76■■□□□ 1.55
CAPN1-211ENST00000527739 SLC4A2P04920 1241 aa24.75■■□□□ 1.55
CAPN1-211ENST00000527739 AOC3Q16853 763 aa24.75■■□□□ 1.55
CAPN1-211ENST00000527739 SUPT20HQ8NEM7 779 aa24.75■■□□□ 1.55
CAPN1-211ENST00000527739 PI4KAP2A4QPH2 592 aa24.74■■□□□ 1.55
CAPN1-211ENST00000527739 ITGBL1O95965 494 aaPredicted RBP24.74■■□□□ 1.55
CAPN1-211ENST00000527739 SF3B3Q15393 1217 aaKnown RBP24.74■■□□□ 1.55
CAPN1-211ENST00000527739 KSR2Q6VAB6 950 aa24.74■■□□□ 1.55
CAPN1-211ENST00000527739 PI4KAP1Q8N8J0 262 aa24.74■■□□□ 1.55
CAPN1-211ENST00000527739 CCDC191Q8NCU4 936 aa24.74■■□□□ 1.55
CAPN1-211ENST00000527739 CWC25Q9NXE8 425 aaPredicted RBP24.74■■□□□ 1.55
CAPN1-211ENST00000527739 HACL1Q9UJ83 578 aa24.74■■□□□ 1.55
CAPN1-211ENST00000527739 COL4A5P29400 1685 aa24.74■■□□□ 1.55
CAPN1-211ENST00000527739 ADAMTSL1Q8N6G6 1762 aa24.73■■□□□ 1.55
CAPN1-211ENST00000527739 FANCIQ9NVI1 1328 aa24.73■■□□□ 1.55
CAPN1-211ENST00000527739 HSP90B1P14625 803 aaKnown RBP24.73■■□□□ 1.55
CAPN1-211ENST00000527739 GPC2Q8N158 579 aa24.73■■□□□ 1.55
CAPN1-211ENST00000527739 CLEC11AQ9Y240 323 aa24.73■■□□□ 1.55
CAPN1-211ENST00000527739 ANKRD36CQ5JPF3 1778 aa24.72■■□□□ 1.55
CAPN1-211ENST00000527739 NEXNQ0ZGT2 675 aa24.72■■□□□ 1.55
CAPN1-211ENST00000527739 CELF1Q92879 486 aaKnown RBP24.72■■□□□ 1.55
CAPN1-211ENST00000527739 CNTNAP1P78357 1384 aa24.71■■□□□ 1.55
CAPN1-211ENST00000527739 PCCAP05165 728 aaPredicted RBP24.71■■□□□ 1.55
CAPN1-211ENST00000527739 EPHX2P34913 555 aa24.71■■□□□ 1.55
CAPN1-211ENST00000527739 G2E3Q7L622 706 aa24.71■■□□□ 1.55
CAPN1-211ENST00000527739 TMC4Q7Z404 712 aa24.71■■□□□ 1.55
CAPN1-211ENST00000527739 EXOSC9Q06265 439 aaKnown RBP24.7■■□□□ 1.54
CAPN1-211ENST00000527739 CCDC85AQ96PX6 553 aaPredicted RBP24.7■■□□□ 1.54
CAPN1-211ENST00000527739 RTFDC1Q9BY42 306 aaPredicted RBP24.69■■□□□ 1.54
CAPN1-211ENST00000527739 VPS33BQ9H267 617 aa24.69■■□□□ 1.54
CAPN1-211ENST00000527739 NSFL1CQ9UNZ2 370 aaKnown RBP24.69■■□□□ 1.54
CAPN1-211ENST00000527739 LMOD1P29536 600 aaPredicted RBP24.68■■□□□ 1.54
CAPN1-211ENST00000527739 RPS8P62241 208 aaKnown RBP24.68■■□□□ 1.54
CAPN1-211ENST00000527739 MAP1SQ66K74 1059 aaPredicted RBP24.68■■□□□ 1.54
CAPN1-211ENST00000527739 LTBP1Q14766 1721 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 TMEM88BA6NKF7 163 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 PDE8AO60658 829 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 VAMP4O75379 141 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 CCDC152Q4G0S7 254 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 MYH16Q9H6N6 1097 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 SPINK5Q9NQ38 1064 aaPredicted RBP24.67■■□□□ 1.54
CAPN1-211ENST00000527739 SEC31BQ9NQW1 1179 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 ZNRF3Q9ULT6 936 aa24.67■■□□□ 1.54
CAPN1-211ENST00000527739 C6orf229H3BNL8 230 aa24.66■■□□□ 1.54
CAPN1-211ENST00000527739 FOXN1O15353 648 aa24.66■■□□□ 1.54
CAPN1-211ENST00000527739 IGKV5-2P06315 115 aa24.66■■□□□ 1.54
CAPN1-211ENST00000527739 VEGFBP49765 207 aa24.66■■□□□ 1.54
CAPN1-211ENST00000527739 FLIIQ13045 1269 aa24.66■■□□□ 1.54
CAPN1-211ENST00000527739 FKBP5Q13451 457 aaPredicted RBP24.66■■□□□ 1.54
CAPN1-211ENST00000527739 CWF19L2Q2TBE0 894 aaKnown RBP24.66■■□□□ 1.54
CAPN1-211ENST00000527739 PNMA8AQ86V59 439 aaPredicted RBP24.66■■□□□ 1.54
CAPN1-211ENST00000527739 KIAA2012Q0VF49 1180 aa24.65■■□□□ 1.54
CAPN1-211ENST00000527739 RIMBP2O15034 1052 aa24.64■■□□□ 1.54
CAPN1-211ENST00000527739 GPSM2P81274 684 aa24.64■■□□□ 1.54
CAPN1-211ENST00000527739 CNTROBQ8N137 903 aa24.64■■□□□ 1.54
CAPN1-211ENST00000527739 EPS15P42566 896 aa24.63■■□□□ 1.53
CAPN1-211ENST00000527739 WASHC4Q2M389 1173 aa24.63■■□□□ 1.53
CAPN1-211ENST00000527739 NEURL1BA8MQ27 555 aa24.62■■□□□ 1.53
CAPN1-211ENST00000527739 RAD17O75943 681 aa24.62■■□□□ 1.53
CAPN1-211ENST00000527739 CXCL9Q07325 125 aa24.62■■□□□ 1.53
CAPN1-211ENST00000527739 LAMB2P55268 1798 aa24.62■■□□□ 1.53
CAPN1-211ENST00000527739 FMR1Q06787 632 aaKnown RBP eCLIP24.61■■□□□ 1.531e-6■□□□□ 10.5
CAPN1-211ENST00000527739 CIAPIN1Q6FI81 312 aa24.61■■□□□ 1.53
CAPN1-211ENST00000527739 DNAAF4Q8WXU2 420 aa24.61■■□□□ 1.53
CAPN1-211ENST00000527739 ANKIB1Q9P2G1 1089 aa24.61■■□□□ 1.53
CAPN1-211ENST00000527739 SCNN1DP51172 638 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 TNIP1Q15025 636 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 UBE3BQ7Z3V4 1068 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 ANKRD18AQ8IVF6 992 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 EYA3Q99504 573 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 BCL2L13Q9BXK5 485 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 POLLQ9UGP5 575 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 CDHR2Q9BYE9 1310 aa24.6■■□□□ 1.53
CAPN1-211ENST00000527739 DDX60Q8IY21 1712 aaKnown RBP24.59■■□□□ 1.53
CAPN1-211ENST00000527739 CTSWP56202 376 aa24.59■■□□□ 1.53
CAPN1-211ENST00000527739 GPR101Q96P66 508 aaPredicted RBP24.59■■□□□ 1.53
CAPN1-211ENST00000527739 G3V3G9 751 aa24.58■■□□□ 1.53
CAPN1-211ENST00000527739 GMPSP49915 693 aaPredicted RBP24.58■■□□□ 1.53
CAPN1-211ENST00000527739 DCAF8Q5TAQ9 597 aa24.58■■□□□ 1.53
CAPN1-211ENST00000527739 DBNDD1Q9H9R9 158 aa24.58■■□□□ 1.53
CAPN1-211ENST00000527739 RASSF10A6NK89 507 aa24.57■■□□□ 1.52
CAPN1-211ENST00000527739 GCKRQ14397 625 aa24.57■■□□□ 1.52
CAPN1-211ENST00000527739 DOK7Q18PE1 504 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms