RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 F6X3S4 739 aa23.2■■□□□ 1.3
TRIM3-205ENST00000527237 GRAPQ13588 217 aa23.2■■□□□ 1.3
TRIM3-205ENST00000527237 SF3B3Q15393 1217 aaKnown RBP23.2■■□□□ 1.3
TRIM3-205ENST00000527237 GRAPLQ8TC17 118 aaPredicted RBP23.2■■□□□ 1.3
TRIM3-205ENST00000527237 CELF1Q92879 486 aaKnown RBP23.2■■□□□ 1.3
TRIM3-205ENST00000527237 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
TRIM3-205ENST00000527237 DNAAF4Q8WXU2 420 aa23.19■■□□□ 1.3
TRIM3-205ENST00000527237 PSMD1Q99460 953 aa23.19■■□□□ 1.3
TRIM3-205ENST00000527237 ATP6V0A2Q9Y487 856 aa23.19■■□□□ 1.3
TRIM3-205ENST00000527237 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
TRIM3-205ENST00000527237 GLTPD2A6NH11 291 aa23.18■■□□□ 1.3
TRIM3-205ENST00000527237 IARSP41252 1262 aaKnown RBP23.18■■□□□ 1.3
TRIM3-205ENST00000527237 RRAGCQ9HB90 399 aa23.18■■□□□ 1.3
TRIM3-205ENST00000527237 ZNF541Q9H0D2 1346 aa23.17■■□□□ 1.3
TRIM3-205ENST00000527237 CC2D2BQ6DHV5 1058 aa23.17■■□□□ 1.3
TRIM3-205ENST00000527237 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
TRIM3-205ENST00000527237 SEC31BQ9NQW1 1179 aa23.17■■□□□ 1.3
TRIM3-205ENST00000527237 PSME4Q14997 1843 aa23.15■■□□□ 1.3
TRIM3-205ENST00000527237 PDE8AO60658 829 aa23.15■■□□□ 1.3
TRIM3-205ENST00000527237 UBE3BQ7Z3V4 1068 aa23.15■■□□□ 1.3
TRIM3-205ENST00000527237 SCN9AQ15858 1988 aa23.14■■□□□ 1.3
TRIM3-205ENST00000527237 BBOX1O75936 387 aa23.14■■□□□ 1.29
TRIM3-205ENST00000527237 GCKRQ14397 625 aa23.14■■□□□ 1.29
TRIM3-205ENST00000527237 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
TRIM3-205ENST00000527237 TRMT2AQ8IZ69 625 aaKnown RBP23.14■■□□□ 1.29
TRIM3-205ENST00000527237 DDNO94850 711 aaPredicted RBP23.13■■□□□ 1.29
TRIM3-205ENST00000527237 BCL2L13Q9BXK5 485 aa23.13■■□□□ 1.29
TRIM3-205ENST00000527237 ADAMTSL1Q8N6G6 1762 aa23.12■■□□□ 1.29
TRIM3-205ENST00000527237 POTECB2RU33 542 aa23.12■■□□□ 1.29
TRIM3-205ENST00000527237 CASP7P55210 303 aa23.12■■□□□ 1.29
TRIM3-205ENST00000527237 CTSWP56202 376 aa23.12■■□□□ 1.29
TRIM3-205ENST00000527237 AOC3Q16853 763 aa23.12■■□□□ 1.29
TRIM3-205ENST00000527237 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
TRIM3-205ENST00000527237 LINS1Q8NG48 757 aa23.12■■□□□ 1.29
TRIM3-205ENST00000527237 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
TRIM3-205ENST00000527237 H7C1W4 665 aa23.11■■□□□ 1.29
TRIM3-205ENST00000527237 BEND3Q5T5X7 828 aa23.11■■□□□ 1.29
TRIM3-205ENST00000527237 SSH1Q8WYL5 1049 aa23.11■■□□□ 1.29
TRIM3-205ENST00000527237 CCDC152Q4G0S7 254 aa23.1■■□□□ 1.29
TRIM3-205ENST00000527237 DPY19L2Q6NUT2 758 aa23.1■■□□□ 1.29
TRIM3-205ENST00000527237 DPP8Q6V1X1 898 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-205ENST00000527237 MPNDQ8N594 471 aa23.1■■□□□ 1.29
TRIM3-205ENST00000527237 FZD9O00144 591 aa23.09■■□□□ 1.29
TRIM3-205ENST00000527237 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
TRIM3-205ENST00000527237 GRIPAP1Q4V328 841 aa23.09■■□□□ 1.29
TRIM3-205ENST00000527237 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
TRIM3-205ENST00000527237 RTFDC1Q9BY42 306 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-205ENST00000527237 TOMM70O94826 608 aa23.08■■□□□ 1.29
TRIM3-205ENST00000527237 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
TRIM3-205ENST00000527237 TMC4Q7Z404 712 aa23.08■■□□□ 1.29
TRIM3-205ENST00000527237 TTLL11Q8NHH1 800 aa23.08■■□□□ 1.29
TRIM3-205ENST00000527237 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
TRIM3-205ENST00000527237 GREM2Q9H772 168 aa23.08■■□□□ 1.29
TRIM3-205ENST00000527237 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
TRIM3-205ENST00000527237 GPSM2P81274 684 aa23.07■■□□□ 1.28
TRIM3-205ENST00000527237 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
TRIM3-205ENST00000527237 RTL9Q8NET4 1388 aa23.06■■□□□ 1.28
TRIM3-205ENST00000527237 VEGFAP15692 232 aaPredicted RBP23.06■■□□□ 1.28
TRIM3-205ENST00000527237 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRIM3-205ENST00000527237 C16orf71Q8IYS4 520 aaPredicted RBP23.06■■□□□ 1.28
TRIM3-205ENST00000527237 JDP2Q8WYK2 163 aa23.06■■□□□ 1.28
TRIM3-205ENST00000527237 GPR101Q96P66 508 aaPredicted RBP23.06■■□□□ 1.28
TRIM3-205ENST00000527237 FAM161AQ3B820 660 aa23.05■■□□□ 1.28
TRIM3-205ENST00000527237 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
TRIM3-205ENST00000527237 PLA2G12BQ9BX93 195 aa23.05■■□□□ 1.28
TRIM3-205ENST00000527237 SUPT20HQ8NEM7 779 aa23.04■■□□□ 1.28
TRIM3-205ENST00000527237 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
TRIM3-205ENST00000527237 SMC4Q9NTJ3 1288 aa23.04■■□□□ 1.28
TRIM3-205ENST00000527237 NSFL1CQ9UNZ2 370 aaKnown RBP23.04■■□□□ 1.28
TRIM3-205ENST00000527237 POTEIP0CG38 1075 aa23.03■■□□□ 1.28
TRIM3-205ENST00000527237 POTEJP0CG39 1038 aa23.03■■□□□ 1.28
TRIM3-205ENST00000527237 KIAA2012Q0VF49 1180 aa23.03■■□□□ 1.28
TRIM3-205ENST00000527237 L3MBTL3Q96JM7 780 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-205ENST00000527237 POLLQ9UGP5 575 aa23.03■■□□□ 1.28
TRIM3-205ENST00000527237 GRM8O00222 908 aa23.02■■□□□ 1.28
TRIM3-205ENST00000527237 ALDH1L2Q3SY69 923 aa23.02■■□□□ 1.28
TRIM3-205ENST00000527237 EPHA10Q5JZY3 1008 aa23.02■■□□□ 1.28
TRIM3-205ENST00000527237 ANKRD18AQ8IVF6 992 aa23.02■■□□□ 1.28
TRIM3-205ENST00000527237 GJA3Q9Y6H8 435 aa23.02■■□□□ 1.28
TRIM3-205ENST00000527237 PTPRCP08575 1304 aa23.02■■□□□ 1.28
TRIM3-205ENST00000527237 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
TRIM3-205ENST00000527237 SRCIN1Q9C0H9 1055 aa23.01■■□□□ 1.27
TRIM3-205ENST00000527237 ALDH1L1O75891 902 aa23■■□□□ 1.27
TRIM3-205ENST00000527237 FOXO4P98177 505 aa23■■□□□ 1.27
TRIM3-205ENST00000527237 GPC2Q8N158 579 aa23■■□□□ 1.27
TRIM3-205ENST00000527237 TBC1D16Q8TBP0 767 aa23■■□□□ 1.27
TRIM3-205ENST00000527237 CDC5LQ99459 802 aaKnown RBP23■■□□□ 1.27
TRIM3-205ENST00000527237 YDJCA8MPS7 323 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 C6orf229H3BNL8 230 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 RIMBP2O15034 1052 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 CSF1RP07333 972 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 HSPA6P17066 643 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 ITGA6P23229 1130 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 VPS33BQ9H267 617 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
TRIM3-205ENST00000527237 WTIPA6NIX2 430 aaPredicted RBP22.98■■□□□ 1.27
TRIM3-205ENST00000527237 UFL1O94874 794 aa22.98■■□□□ 1.27
TRIM3-205ENST00000527237 TAF1DQ9H5J8 278 aaPredicted RBP22.98■■□□□ 1.27
TRIM3-205ENST00000527237 DBNDD1Q9H9R9 158 aa22.98■■□□□ 1.27
TRIM3-205ENST00000527237 PODXL2Q9NZ53 605 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms