RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 UBE3BQ7Z3V4 1068 aa24.74■■□□□ 1.55
TTC39A-215ENST00000527205 LTBP3Q9NS15 1303 aa24.74■■□□□ 1.55
TTC39A-215ENST00000527205 DUOX1Q9NRD9 1551 aa24.73■■□□□ 1.55
TTC39A-215ENST00000527205 PDE8AO60658 829 aa24.73■■□□□ 1.55
TTC39A-215ENST00000527205 LMNB1P20700 586 aa24.73■■□□□ 1.55
TTC39A-215ENST00000527205 GRAPQ13588 217 aa24.73■■□□□ 1.55
TTC39A-215ENST00000527205 DDX46Q7L014 1031 aaKnown RBP24.73■■□□□ 1.55
TTC39A-215ENST00000527205 GRAPLQ8TC17 118 aaPredicted RBP24.73■■□□□ 1.55
TTC39A-215ENST00000527205 CELF1Q92879 486 aaKnown RBP24.73■■□□□ 1.55
TTC39A-215ENST00000527205 CCDC85AQ96PX6 553 aaPredicted RBP24.73■■□□□ 1.55
TTC39A-215ENST00000527205 TAOK3Q9H2K8 898 aa24.73■■□□□ 1.55
TTC39A-215ENST00000527205 COL4A5P29400 1685 aa24.72■■□□□ 1.55
TTC39A-215ENST00000527205 RARSP54136 660 aaKnown RBP24.72■■□□□ 1.55
TTC39A-215ENST00000527205 SLC4A10Q6U841 1118 aa24.72■■□□□ 1.55
TTC39A-215ENST00000527205 SEC31BQ9NQW1 1179 aa24.72■■□□□ 1.55
TTC39A-215ENST00000527205 PTPRCP08575 1304 aa24.71■■□□□ 1.55
TTC39A-215ENST00000527205 ZNF526Q8TF50 670 aaPredicted RBP24.71■■□□□ 1.55
TTC39A-215ENST00000527205 A0A1B0GUL6 1792 aa24.7■■□□□ 1.55
TTC39A-215ENST00000527205 CTSWP56202 376 aa24.7■■□□□ 1.54
TTC39A-215ENST00000527205 FKBP4Q02790 459 aaKnown RBP eCLIP24.7■■□□□ 1.54
TTC39A-215ENST00000527205 ATP6V0A2Q9Y487 856 aa24.7■■□□□ 1.54
TTC39A-215ENST00000527205 ZNF277Q9NRM2 450 aaPredicted RBP24.69■■□□□ 1.54
TTC39A-215ENST00000527205 RTKN2Q8IZC4 609 aa24.68■■□□□ 1.54
TTC39A-215ENST00000527205 BBOX1O75936 387 aa24.67■■□□□ 1.54
TTC39A-215ENST00000527205 BRPF1P55201 1214 aaPredicted RBP24.67■■□□□ 1.54
TTC39A-215ENST00000527205 TTLL11Q8NHH1 800 aa24.67■■□□□ 1.54
TTC39A-215ENST00000527205 PLA2G12BQ9BX93 195 aa24.67■■□□□ 1.54
TTC39A-215ENST00000527205 SRCIN1Q9C0H9 1055 aa24.67■■□□□ 1.54
TTC39A-215ENST00000527205 NOB1Q9ULX3 412 aaKnown RBP24.67■■□□□ 1.54
TTC39A-215ENST00000527205 ALDH1L1O75891 902 aa24.66■■□□□ 1.54
TTC39A-215ENST00000527205 CCDC152Q4G0S7 254 aa24.66■■□□□ 1.54
TTC39A-215ENST00000527205 SP8Q8IXZ3 490 aa24.66■■□□□ 1.54
TTC39A-215ENST00000527205 BCAR3O75815 825 aa24.65■■□□□ 1.54
TTC39A-215ENST00000527205 HSP90B1P14625 803 aaKnown RBP24.65■■□□□ 1.54
TTC39A-215ENST00000527205 CC2D2BQ6DHV5 1058 aa24.65■■□□□ 1.54
TTC39A-215ENST00000527205 PSMD1Q99460 953 aa24.65■■□□□ 1.54
TTC39A-215ENST00000527205 GREM2Q9H772 168 aa24.65■■□□□ 1.54
TTC39A-215ENST00000527205 GRM8O00222 908 aa24.64■■□□□ 1.54
TTC39A-215ENST00000527205 EPHA10Q5JZY3 1008 aa24.64■■□□□ 1.54
TTC39A-215ENST00000527205 IARSP41252 1262 aaKnown RBP24.63■■□□□ 1.53
TTC39A-215ENST00000527205 TNNQ9UQP3 1299 aa24.63■■□□□ 1.53
TTC39A-215ENST00000527205 RTL9Q8NET4 1388 aa24.63■■□□□ 1.53
TTC39A-215ENST00000527205 RPS8P62241 208 aaKnown RBP24.62■■□□□ 1.53
TTC39A-215ENST00000527205 FOXO4P98177 505 aa24.62■■□□□ 1.53
TTC39A-215ENST00000527205 FAM161AQ3B820 660 aa24.62■■□□□ 1.53
TTC39A-215ENST00000527205 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
TTC39A-215ENST00000527205 WDR90Q96KV7 1748 aa24.61■■□□□ 1.53
TTC39A-215ENST00000527205 NBPF7P0C2Y1 421 aaPredicted RBP24.61■■□□□ 1.53
TTC39A-215ENST00000527205 SUCLG2Q96I99 432 aa24.61■■□□□ 1.53
TTC39A-215ENST00000527205 GPBP1L1Q9HC44 474 aaPredicted RBP24.61■■□□□ 1.53
TTC39A-215ENST00000527205 CSF1RP07333 972 aa24.6■■□□□ 1.53
TTC39A-215ENST00000527205 TMC4Q7Z404 712 aa24.6■■□□□ 1.53
TTC39A-215ENST00000527205 MPNDQ8N594 471 aa24.6■■□□□ 1.53
TTC39A-215ENST00000527205 KAZALD1Q96I82 304 aa24.6■■□□□ 1.53
TTC39A-215ENST00000527205 C9orf78Q9NZ63 289 aaPredicted RBP24.6■■□□□ 1.53
TTC39A-215ENST00000527205 UTYO14607 1347 aa24.6■■□□□ 1.53
TTC39A-215ENST00000527205 KIF16BQ96L93 1317 aa24.6■■□□□ 1.53
TTC39A-215ENST00000527205 GPSM2P81274 684 aa24.59■■□□□ 1.53
TTC39A-215ENST00000527205 DPP8Q6V1X1 898 aaPredicted RBP24.59■■□□□ 1.53
TTC39A-215ENST00000527205 RTFDC1Q9BY42 306 aaPredicted RBP24.59■■□□□ 1.53
TTC39A-215ENST00000527205 NMRK2Q9NPI5 230 aa24.59■■□□□ 1.53
TTC39A-215ENST00000527205 GRIPAP1Q4V328 841 aa24.58■■□□□ 1.53
TTC39A-215ENST00000527205 ZNF541Q9H0D2 1346 aa24.58■■□□□ 1.52
TTC39A-215ENST00000527205 ITGA6P23229 1130 aa24.57■■□□□ 1.52
TTC39A-215ENST00000527205 AOC3Q16853 763 aa24.57■■□□□ 1.52
TTC39A-215ENST00000527205 ANKRD18AQ8IVF6 992 aa24.57■■□□□ 1.52
TTC39A-215ENST00000527205 API5Q9BZZ5 524 aaKnown RBP24.57■■□□□ 1.52
TTC39A-215ENST00000527205 KIF3CO14782 793 aa24.56■■□□□ 1.52
TTC39A-215ENST00000527205 GPR101Q96P66 508 aaPredicted RBP24.56■■□□□ 1.52
TTC39A-215ENST00000527205 USP44Q9H0E7 712 aa24.56■■□□□ 1.52
TTC39A-215ENST00000527205 TMX4Q9H1E5 349 aaPredicted RBP24.56■■□□□ 1.52
TTC39A-215ENST00000527205 GLTPD2A6NH11 291 aa24.55■■□□□ 1.52
TTC39A-215ENST00000527205 PPIP5K2O43314 1243 aa24.55■■□□□ 1.52
TTC39A-215ENST00000527205 LMBR1LQ6UX01 489 aa24.55■■□□□ 1.52
TTC39A-215ENST00000527205 CDC5LQ99459 802 aaKnown RBP24.55■■□□□ 1.52
TTC39A-215ENST00000527205 NSFL1CQ9UNZ2 370 aaKnown RBP24.55■■□□□ 1.52
TTC39A-215ENST00000527205 SCN9AQ15858 1988 aa24.54■■□□□ 1.52
TTC39A-215ENST00000527205 TRIM27P14373 513 aa24.54■■□□□ 1.52
TTC39A-215ENST00000527205 LARGE2Q8N3Y3 721 aa24.54■■□□□ 1.52
TTC39A-215ENST00000527205 ARHGAP45Q92619 1136 aa24.54■■□□□ 1.52
TTC39A-215ENST00000527205 FRAT1Q92837 279 aaPredicted RBP24.54■■□□□ 1.52
TTC39A-215ENST00000527205 POLLQ9UGP5 575 aa24.54■■□□□ 1.52
TTC39A-215ENST00000527205 CHMP3Q9Y3E7 222 aa24.54■■□□□ 1.52
TTC39A-215ENST00000527205 PSME4Q14997 1843 aa24.53■■□□□ 1.52
TTC39A-215ENST00000527205 SCN4AP35499 1836 aa24.52■■□□□ 1.52
TTC39A-215ENST00000527205 FZD9O00144 591 aa24.52■■□□□ 1.52
TTC39A-215ENST00000527205 DDNO94850 711 aaPredicted RBP24.52■■□□□ 1.52
TTC39A-215ENST00000527205 CCT4P50991 539 aaKnown RBP24.52■■□□□ 1.52
TTC39A-215ENST00000527205 ANKRD44Q8N8A2 993 aa24.52■■□□□ 1.52
TTC39A-215ENST00000527205 SUPT20HQ8NEM7 779 aa24.52■■□□□ 1.52
TTC39A-215ENST00000527205 BICC1Q9H694 974 aaKnown RBP24.52■■□□□ 1.52
TTC39A-215ENST00000527205 KDM2BQ8NHM5 1336 aa24.52■■□□□ 1.52
TTC39A-215ENST00000527205 ZNF646O15015 1829 aaPredicted RBP24.51■■□□□ 1.51
TTC39A-215ENST00000527205 WTIPA6NIX2 430 aaPredicted RBP24.51■■□□□ 1.51
TTC39A-215ENST00000527205 KIAA2012Q0VF49 1180 aa24.51■■□□□ 1.51
TTC39A-215ENST00000527205 ATF7IPQ6VMQ6 1270 aa24.51■■□□□ 1.51
TTC39A-215ENST00000527205 TBC1D16Q8TBP0 767 aa24.51■■□□□ 1.51
TTC39A-215ENST00000527205 ZNF594Q96JF6 807 aaPredicted RBP24.51■■□□□ 1.51
TTC39A-215ENST00000527205 RRAGCQ9HB90 399 aa24.51■■□□□ 1.51
TTC39A-215ENST00000527205 BSDC1Q9NW68 430 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms