RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PARP10Q53GL7 1025 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 LINC00116Q8NCU8 138 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 TTLL11Q8NHH1 800 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 CCDC85AQ96PX6 553 aaPredicted RBP19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 SLKQ9H2G2 1235 aaPredicted RBP19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 CEP126Q9P2H0 1117 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 ZNF652Q9Y2D9 606 aa19.64■□□□□ 0.74
SNRNP35-204ENST00000527158 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
SNRNP35-204ENST00000527158 KIAA1211Q6ZU35 1233 aa19.64■□□□□ 0.73
SNRNP35-204ENST00000527158 PTF1AQ7RTS3 328 aa19.64■□□□□ 0.73
SNRNP35-204ENST00000527158 AK7Q96M32 723 aa19.64■□□□□ 0.73
SNRNP35-204ENST00000527158 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.73
SNRNP35-204ENST00000527158 DBNDD2Q9BQY9 259 aa19.64■□□□□ 0.73
SNRNP35-204ENST00000527158 FAM182BQ5T319 152 aa19.63■□□□□ 0.73
SNRNP35-204ENST00000527158 ANKRD18BA2A2Z9 1011 aa19.63■□□□□ 0.73
SNRNP35-204ENST00000527158 SEPT12Q8IYM1 358 aa19.63■□□□□ 0.73
SNRNP35-204ENST00000527158 UTP14AQ9BVJ6 771 aaKnown RBP19.63■□□□□ 0.73
SNRNP35-204ENST00000527158 PUS3Q9BZE2 481 aaKnown RBP19.63■□□□□ 0.73
SNRNP35-204ENST00000527158 SH3TC1Q8TE82 1336 aa19.62■□□□□ 0.73
SNRNP35-204ENST00000527158 CNTNAP4Q9C0A0 1308 aa19.62■□□□□ 0.73
SNRNP35-204ENST00000527158 SUSD4Q5VX71 490 aa19.62■□□□□ 0.73
SNRNP35-204ENST00000527158 ANTXR1Q9H6X2 564 aa19.62■□□□□ 0.73
SNRNP35-204ENST00000527158 QTRT2Q9H974 415 aaKnown RBP19.62■□□□□ 0.73
SNRNP35-204ENST00000527158 ITGA6P23229 1130 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 ANAPC15P60006 121 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 SPRYD3Q8NCJ5 442 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 FSD1Q9BTV5 496 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 AKAP2Q9Y2D5 859 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 HSP90B1P14625 803 aaKnown RBP19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 IL25Q9H293 177 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 GREM2Q9H772 168 aa19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 COL5A3P25940 1745 aaPredicted RBP19.61■□□□□ 0.73
SNRNP35-204ENST00000527158 K7ELQ4 463 aaPredicted RBP19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 ST18O60284 1047 aa19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 KCNQ4P56696 695 aa19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 TIMM10P62072 90 aa19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 RC3H1Q5TC82 1133 aaKnown RBP19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 NHSQ6T4R5 1651 aa19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 CCNL1Q9UK58 526 aaPredicted RBP19.6■□□□□ 0.73
SNRNP35-204ENST00000527158 A0A1B0GUL7 405 aa19.59■□□□□ 0.73
SNRNP35-204ENST00000527158 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
SNRNP35-204ENST00000527158 HAUS7Q99871 368 aa19.59■□□□□ 0.73
SNRNP35-204ENST00000527158 FAM177BA6PVY3 158 aa19.59■□□□□ 0.73
SNRNP35-204ENST00000527158 CD2BP2O95400 341 aaKnown RBP19.59■□□□□ 0.73
SNRNP35-204ENST00000527158 ZNF609O15014 1411 aa19.58■□□□□ 0.72
SNRNP35-204ENST00000527158 RAD50Q92878 1312 aa19.58■□□□□ 0.72
SNRNP35-204ENST00000527158 HSP90AA1P07900 732 aaKnown RBP19.58■□□□□ 0.72
SNRNP35-204ENST00000527158 BTAF1O14981 1849 aa19.58■□□□□ 0.72
SNRNP35-204ENST00000527158 RGL2O15211 777 aa19.57■□□□□ 0.72
SNRNP35-204ENST00000527158 HSPA4P34932 840 aa19.57■□□□□ 0.72
SNRNP35-204ENST00000527158 DNAJC2Q99543 621 aaKnown RBP19.57■□□□□ 0.72
SNRNP35-204ENST00000527158 LSG1Q9H089 658 aaKnown RBP19.57■□□□□ 0.72
SNRNP35-204ENST00000527158 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
SNRNP35-204ENST00000527158 RPS6KA4O75676 772 aa19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 METTL24Q5JXM2 366 aa19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 IL27Q8NEV9 243 aa19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 RIPOR2Q9Y4F9 1068 aa19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 NMIQ13287 307 aaPredicted RBP19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 GORABQ5T7V8 394 aa19.56■□□□□ 0.72
SNRNP35-204ENST00000527158 NTSR2O95665 410 aa19.55■□□□□ 0.72
SNRNP35-204ENST00000527158 CCDC158Q5M9N0 1113 aa19.55■□□□□ 0.72
SNRNP35-204ENST00000527158 L1TD1Q5T7N2 865 aaKnown RBP19.55■□□□□ 0.72
SNRNP35-204ENST00000527158 IL17RAQ96F46 866 aa19.55■□□□□ 0.72
SNRNP35-204ENST00000527158 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
SNRNP35-204ENST00000527158 EDC3Q96F86 508 aaKnown RBP19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 FAM227BQ96M60 508 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 GNPATO15228 680 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 NEK4P51957 841 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 CCDC152Q4G0S7 254 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 CHMP5Q9NZZ3 219 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 RTCBQ9Y3I0 505 aaKnown RBP19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 MYH3P11055 1940 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 RFX7Q2KHR2 1363 aa19.54■□□□□ 0.72
SNRNP35-204ENST00000527158 IFIT1P09914 478 aaKnown RBP19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 NARFQ9UHQ1 456 aa19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 TICAM2Q86XR7 235 aa19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 XAGE2Q96GT9 111 aa19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 SNRKQ9NRH2 765 aa19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 PAG1Q9NWQ8 432 aa19.53■□□□□ 0.72
SNRNP35-204ENST00000527158 ZPR1O75312 459 aa19.52■□□□□ 0.72
SNRNP35-204ENST00000527158 MCM2P49736 904 aa19.52■□□□□ 0.72
SNRNP35-204ENST00000527158 ATP2B3Q16720 1220 aa19.52■□□□□ 0.72
SNRNP35-204ENST00000527158 TTC39AQ5SRH9 613 aa19.52■□□□□ 0.72
SNRNP35-204ENST00000527158 KBTBD3Q8NAB2 608 aa19.52■□□□□ 0.72
SNRNP35-204ENST00000527158 NDUFB9Q9Y6M9 179 aa19.52■□□□□ 0.72
SNRNP35-204ENST00000527158 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 A0A0D9SFI3 127 aa19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 MPHOSPH8Q99549 860 aa19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 BCORQ6W2J9 1755 aa19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 MROH5Q6ZUA9 1318 aa19.51■□□□□ 0.71
SNRNP35-204ENST00000527158 GOLIM4O00461 696 aa19.5■□□□□ 0.71
SNRNP35-204ENST00000527158 PTH1RQ03431 593 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms