RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 SASH1O94885 1247 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 SPC24Q8NBT2 197 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 ZNF446Q9NWS9 450 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 USP27XA6NNY8 438 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 KCNJ6P48051 423 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 TERF2Q15554 542 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 NBPF11Q86T75 865 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 NECAB1Q8N987 351 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
SCN3B-203ENST00000527125 H2AFXP16104 143 aaPredicted RBP11□□□□□ -0.65
SCN3B-203ENST00000527125 AGXT2Q9BYV1 514 aa11□□□□□ -0.65
SCN3B-203ENST00000527125 UBXN6Q9BZV1 441 aa11□□□□□ -0.65
SCN3B-203ENST00000527125 TNRQ92752 1358 aa11□□□□□ -0.65
SCN3B-203ENST00000527125 LARP1Q6PKG0 1096 aaKnown RBP11□□□□□ -0.65
SCN3B-203ENST00000527125 RUFY2Q8WXA3 655 aa11□□□□□ -0.65
SCN3B-203ENST00000527125 PXDNQ92626 1479 aa11□□□□□ -0.65
SCN3B-203ENST00000527125 TAF3Q5VWG9 929 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 FAM173BQ6P4H8 233 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 DNAAF4Q8WXU2 420 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 ARID3AQ99856 593 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 OSBPL5Q9H0X9 879 aaPredicted RBP10.99□□□□□ -0.65
SCN3B-203ENST00000527125 NEMFO60524 1076 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 TNNT1P13805 278 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
SCN3B-203ENST00000527125 GTF3C6Q969F1 213 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 FAM227BQ96M60 508 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 RCOR1Q9UKL0 485 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 PDCP20941 246 aa10.99□□□□□ -0.65
SCN3B-203ENST00000527125 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
SCN3B-203ENST00000527125 C11orf57Q6ZUT1 292 aaPredicted RBP10.99□□□□□ -0.65
SCN3B-203ENST00000527125 RGPD5Q99666 1765 aa10.98□□□□□ -0.65
SCN3B-203ENST00000527125 A0A0D9SFI3 127 aa10.98□□□□□ -0.65
SCN3B-203ENST00000527125 DTNBO60941 627 aa10.98□□□□□ -0.65
SCN3B-203ENST00000527125 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
SCN3B-203ENST00000527125 TNMDQ9H2S6 317 aa10.98□□□□□ -0.65
SCN3B-203ENST00000527125 TMEM51Q9NW97 253 aa10.98□□□□□ -0.65
SCN3B-203ENST00000527125 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
SCN3B-203ENST00000527125 TULP2O00295 520 aa10.98□□□□□ -0.65
SCN3B-203ENST00000527125 CHAF1AQ13111 956 aaPredicted RBP10.98□□□□□ -0.65
SCN3B-203ENST00000527125 ILDR1Q86SU0 546 aaPredicted RBP10.98□□□□□ -0.65
SCN3B-203ENST00000527125 TAF5LO75529 589 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 ANKRD1Q15327 319 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 HDGFL1Q5TGJ6 251 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 ZNF397Q8NF99 534 aaPredicted RBP10.97□□□□□ -0.65
SCN3B-203ENST00000527125 GOLPH3LQ9H4A5 285 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 LTKP29376 864 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 ARID5BQ14865 1188 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 CAMK4Q16566 473 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 EAF2Q96CJ1 260 aaPredicted RBP10.97□□□□□ -0.65
SCN3B-203ENST00000527125 C16orf45Q96MC5 204 aaPredicted RBP10.97□□□□□ -0.65
SCN3B-203ENST00000527125 BPIFA3Q9BQP9 254 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 HMG20BQ9P0W2 317 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 MYH7P12883 1935 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 HIP1O00291 1037 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 ZNF165P49910 485 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 CCAR2Q8N163 923 aaKnown RBP10.97□□□□□ -0.65
SCN3B-203ENST00000527125 DNAJC25Q9H1X3 360 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 CHPF2Q9P2E5 772 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 ZNF609O15014 1411 aa10.97□□□□□ -0.65
SCN3B-203ENST00000527125 ALS2Q96Q42 1657 aa10.96□□□□□ -0.65
SCN3B-203ENST00000527125 CTDNEP1O95476 244 aa10.96□□□□□ -0.65
SCN3B-203ENST00000527125 PSMA5P28066 241 aa10.96□□□□□ -0.65
SCN3B-203ENST00000527125 CEP135Q66GS9 1140 aa10.96□□□□□ -0.65
SCN3B-203ENST00000527125 ZNF589Q86UQ0 364 aaPredicted RBP10.96□□□□□ -0.65
SCN3B-203ENST00000527125 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
SCN3B-203ENST00000527125 FBXL16Q8N461 479 aa10.96□□□□□ -0.65
SCN3B-203ENST00000527125 PI4KAP2A4QPH2 592 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 SLC20A2Q08357 652 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 FBXO38Q6PIJ6 1188 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 PI4KAP1Q8N8J0 262 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 ERO1AQ96HE7 468 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 SPATA32Q96LK8 384 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 CLIP2Q9UDT6 1046 aa10.96□□□□□ -0.66
SCN3B-203ENST00000527125 ZRANB2O95218 330 aaKnown RBP eCLIP10.96□□□□□ -0.66
SCN3B-203ENST00000527125 ZNF215Q9UL58 517 aaPredicted RBP10.96□□□□□ -0.66
SCN3B-203ENST00000527125 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 UBR2Q8IWV8 1755 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 ZBTB7CA1YPR0 619 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 VPS37CA5D8V6 355 aaPredicted RBP10.95□□□□□ -0.66
SCN3B-203ENST00000527125 FANCGO15287 622 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 ZSCAN16Q9H4T2 348 aaPredicted RBP10.95□□□□□ -0.66
SCN3B-203ENST00000527125 FHOD1Q9Y613 1164 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 PDIA6Q15084 440 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 E4F1Q66K89 784 aaPredicted RBP10.95□□□□□ -0.66
SCN3B-203ENST00000527125 NAA16Q6N069 864 aaPredicted RBP10.95□□□□□ -0.66
SCN3B-203ENST00000527125 LLPHQ9BRT6 129 aaKnown RBP10.95□□□□□ -0.66
SCN3B-203ENST00000527125 HSD3B7Q9H2F3 369 aa10.95□□□□□ -0.66
SCN3B-203ENST00000527125 TLR7Q9NYK1 1049 aaKnown RBP10.95□□□□□ -0.66
SCN3B-203ENST00000527125 KCNQ3O43525 872 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 ATL3Q6DD88 541 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 CCDC112Q8NEF3 446 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 MST1RQ04912 1400 aa10.94□□□□□ -0.66
SCN3B-203ENST00000527125 COL18A1P39060 1754 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms