RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 GRIPAP1Q4V328 841 aa24.62■■□□□ 1.53
PKP3-204ENST00000526971 DDX60Q8IY21 1712 aaKnown RBP24.61■■□□□ 1.53
PKP3-204ENST00000526971 LMOD1P29536 600 aaPredicted RBP24.61■■□□□ 1.53
PKP3-204ENST00000526971 CTCFP49711 727 aaPredicted RBP24.61■■□□□ 1.53
PKP3-204ENST00000526971 AIMP1Q12904 312 aaKnown RBP24.61■■□□□ 1.53
PKP3-204ENST00000526971 AOC3Q16853 763 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 DEFB115Q30KQ5 88 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 SLC10A5Q5PT55 438 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 MIER1Q8N108 512 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 TSPYL6Q8N831 410 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 AIDAQ96BJ3 306 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 UTP14AQ9BVJ6 771 aaKnown RBP24.61■■□□□ 1.53
PKP3-204ENST00000526971 ATP6V0A2Q9Y487 856 aa24.61■■□□□ 1.53
PKP3-204ENST00000526971 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
PKP3-204ENST00000526971 NIM1KQ8IY84 436 aa24.6■■□□□ 1.53
PKP3-204ENST00000526971 NLRP3Q96P20 1036 aa24.6■■□□□ 1.53
PKP3-204ENST00000526971 CHMP4AQ9BY43 222 aa24.6■■□□□ 1.53
PKP3-204ENST00000526971 HYPKQ9NX55 129 aa24.6■■□□□ 1.53
PKP3-204ENST00000526971 WDR33Q9C0J8 1336 aaKnown RBP24.6■■□□□ 1.53
PKP3-204ENST00000526971 DUOX1Q9NRD9 1551 aa24.59■■□□□ 1.53
PKP3-204ENST00000526971 LRRC37AA6NMS7 1700 aa24.59■■□□□ 1.53
PKP3-204ENST00000526971 ABT1Q9ULW3 272 aaKnown RBP24.59■■□□□ 1.53
PKP3-204ENST00000526971 FANCIQ9NVI1 1328 aa24.59■■□□□ 1.53
PKP3-204ENST00000526971 TRAF5O00463 557 aa24.58■■□□□ 1.53
PKP3-204ENST00000526971 LBX1P52954 281 aa24.58■■□□□ 1.53
PKP3-204ENST00000526971 SPINK5Q9NQ38 1064 aaPredicted RBP24.58■■□□□ 1.53
PKP3-204ENST00000526971 HSPA8P11142 646 aaKnown RBP24.57■■□□□ 1.52
PKP3-204ENST00000526971 CCDC30Q5VVM6 783 aa24.57■■□□□ 1.52
PKP3-204ENST00000526971 ZNF521Q96K83 1311 aa24.57■■□□□ 1.52
PKP3-204ENST00000526971 COL4A1P02462 1669 aa24.56■■□□□ 1.52
PKP3-204ENST00000526971 HCLS1P14317 486 aaPredicted RBP24.56■■□□□ 1.52
PKP3-204ENST00000526971 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
PKP3-204ENST00000526971 TWISTNBQ3B726 338 aaPredicted RBP24.56■■□□□ 1.52
PKP3-204ENST00000526971 USP50Q70EL3 339 aaPredicted RBP24.56■■□□□ 1.52
PKP3-204ENST00000526971 NLRP10Q86W26 655 aa24.56■■□□□ 1.52
PKP3-204ENST00000526971 RTFDC1Q9BY42 306 aaPredicted RBP24.56■■□□□ 1.52
PKP3-204ENST00000526971 GPRC5DQ9NZD1 345 aa24.56■■□□□ 1.52
PKP3-204ENST00000526971 CXCL9Q07325 125 aa24.55■■□□□ 1.52
PKP3-204ENST00000526971 CST9Q5W186 159 aa24.55■■□□□ 1.52
PKP3-204ENST00000526971 MYH16Q9H6N6 1097 aa24.55■■□□□ 1.52
PKP3-204ENST00000526971 PLBD2Q8NHP8 589 aa24.54■■□□□ 1.52
PKP3-204ENST00000526971 ZNF428Q96B54 188 aa24.54■■□□□ 1.52
PKP3-204ENST00000526971 HSP90AB3PQ58FF7 597 aa24.53■■□□□ 1.52
PKP3-204ENST00000526971 ANKRD13DQ6ZTN6 518 aa24.53■■□□□ 1.52
PKP3-204ENST00000526971 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
PKP3-204ENST00000526971 GMPSP49915 693 aaPredicted RBP24.52■■□□□ 1.52
PKP3-204ENST00000526971 EXOSC9Q06265 439 aaKnown RBP24.52■■□□□ 1.52
PKP3-204ENST00000526971 TCIRG1Q13488 830 aa24.52■■□□□ 1.52
PKP3-204ENST00000526971 SP8Q8IXZ3 490 aa24.52■■□□□ 1.52
PKP3-204ENST00000526971 CAPNS2Q96L46 248 aa24.52■■□□□ 1.52
PKP3-204ENST00000526971 VPS33BQ9H267 617 aa24.52■■□□□ 1.52
PKP3-204ENST00000526971 PHAXQ9H814 394 aaKnown RBP24.52■■□□□ 1.52
PKP3-204ENST00000526971 CYP4F22Q6NT55 531 aa24.51■■□□□ 1.51
PKP3-204ENST00000526971 DPP8Q6V1X1 898 aaPredicted RBP24.51■■□□□ 1.51
PKP3-204ENST00000526971 ADARB2Q9NS39 739 aaKnown RBP24.51■■□□□ 1.51
PKP3-204ENST00000526971 BBOX1O75936 387 aa24.5■■□□□ 1.51
PKP3-204ENST00000526971 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
PKP3-204ENST00000526971 MPNDQ8N594 471 aa24.5■■□□□ 1.51
PKP3-204ENST00000526971 SUPT20HQ8NEM7 779 aa24.5■■□□□ 1.51
PKP3-204ENST00000526971 TRMT112Q9UI30 125 aaKnown RBP24.5■■□□□ 1.51
PKP3-204ENST00000526971 SH3TC1Q8TE82 1336 aa24.5■■□□□ 1.51
PKP3-204ENST00000526971 VAMP4O75379 141 aa24.49■■□□□ 1.51
PKP3-204ENST00000526971 MAP2K1Q02750 393 aaPredicted RBP24.49■■□□□ 1.51
PKP3-204ENST00000526971 GRAPQ13588 217 aa24.49■■□□□ 1.51
PKP3-204ENST00000526971 PAXIP1Q6ZW49 1069 aaPredicted RBP24.49■■□□□ 1.51
PKP3-204ENST00000526971 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
PKP3-204ENST00000526971 STK31Q9BXU1 1019 aa24.49■■□□□ 1.51
PKP3-204ENST00000526971 TMX4Q9H1E5 349 aaPredicted RBP24.49■■□□□ 1.51
PKP3-204ENST00000526971 TLL2Q9Y6L7 1015 aa24.49■■□□□ 1.51
PKP3-204ENST00000526971 SHTN1A0MZ66 631 aa24.48■■□□□ 1.51
PKP3-204ENST00000526971 YDJCA8MPS7 323 aa24.48■■□□□ 1.51
PKP3-204ENST00000526971 RAD17O75943 681 aa24.48■■□□□ 1.51
PKP3-204ENST00000526971 GRM1Q13255 1194 aa24.48■■□□□ 1.51
PKP3-204ENST00000526971 HIRAP54198 1017 aaPredicted RBP24.47■■□□□ 1.51
PKP3-204ENST00000526971 CIAPIN1Q6FI81 312 aa24.47■■□□□ 1.51
PKP3-204ENST00000526971 DDX46Q7L014 1031 aaKnown RBP24.47■■□□□ 1.51
PKP3-204ENST00000526971 GLIS2Q9BZE0 524 aaPredicted RBP24.47■■□□□ 1.51
PKP3-204ENST00000526971 POLR2AP24928 1970 aaKnown RBP24.47■■□□□ 1.51
PKP3-204ENST00000526971 RIC3Q7Z5B4 369 aa24.46■■□□□ 1.51
PKP3-204ENST00000526971 TRPM4Q8TD43 1214 aa24.46■■□□□ 1.51
PKP3-204ENST00000526971 CDHR2Q9BYE9 1310 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 E9PSI1 815 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 AOC2O75106 756 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 SLC4A2P04920 1241 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 ECE1P42892 770 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 GPR101Q96P66 508 aaPredicted RBP24.45■■□□□ 1.5
PKP3-204ENST00000526971 ISCA1Q9BUE6 129 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 PGAP2Q9UHJ9 254 aa24.45■■□□□ 1.5
PKP3-204ENST00000526971 SCN9AQ15858 1988 aa24.44■■□□□ 1.5
PKP3-204ENST00000526971 CELF2O95319 508 aaKnown RBP24.44■■□□□ 1.5
PKP3-204ENST00000526971 DDX58O95786 925 aaKnown RBP24.44■■□□□ 1.5
PKP3-204ENST00000526971 SAPCD2Q86UD0 394 aa24.43■■□□□ 1.5
PKP3-204ENST00000526971 ABHD8Q96I13 439 aa24.43■■□□□ 1.5
PKP3-204ENST00000526971 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
PKP3-204ENST00000526971 ATP5J2-PTCD1G3V325 749 aa24.42■■□□□ 1.5
PKP3-204ENST00000526971 SLFN5Q08AF3 891 aa24.42■■□□□ 1.5
PKP3-204ENST00000526971 TRIM28Q13263 835 aaKnown RBP24.42■■□□□ 1.5
PKP3-204ENST00000526971 CELF1Q92879 486 aaKnown RBP24.42■■□□□ 1.5
PKP3-204ENST00000526971 TSKSQ9UJT2 592 aa24.42■■□□□ 1.5
PKP3-204ENST00000526971 CASP8AP2Q9UKL3 1982 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms