RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 ATG9AQ7Z3C6 839 aa24.44■■□□□ 1.5
PPP1CA-204ENST00000526510 CLASRPQ8N2M8 674 aaKnown RBP24.44■■□□□ 1.5
PPP1CA-204ENST00000526510 SPEF2Q9C093 1822 aa24.44■■□□□ 1.5
PPP1CA-204ENST00000526510 HCLS1P14317 486 aaPredicted RBP24.43■■□□□ 1.5
PPP1CA-204ENST00000526510 EAF2Q96CJ1 260 aaPredicted RBP24.43■■□□□ 1.5
PPP1CA-204ENST00000526510 AOX1Q06278 1338 aa24.43■■□□□ 1.5
PPP1CA-204ENST00000526510 ADRA2BP18089 450 aa24.43■■□□□ 1.5
PPP1CA-204ENST00000526510 BICDL1Q6ZP65 573 aa24.43■■□□□ 1.5
PPP1CA-204ENST00000526510 GREM2Q9H772 168 aa24.43■■□□□ 1.5
PPP1CA-204ENST00000526510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.42■■□□□ 1.5
PPP1CA-204ENST00000526510 RFC4P35249 363 aa24.42■■□□□ 1.5
PPP1CA-204ENST00000526510 TFCP2Q12800 502 aa24.42■■□□□ 1.5
PPP1CA-204ENST00000526510 CCDC57Q2TAC2 916 aa24.42■■□□□ 1.5
PPP1CA-204ENST00000526510 LRRC24Q50LG9 513 aa24.42■■□□□ 1.5
PPP1CA-204ENST00000526510 SDSP20132 328 aa24.41■■□□□ 1.5
PPP1CA-204ENST00000526510 AACSQ86V21 672 aa24.41■■□□□ 1.5
PPP1CA-204ENST00000526510 PUS3Q9BZE2 481 aaKnown RBP24.41■■□□□ 1.5
PPP1CA-204ENST00000526510 EYA2O00167 538 aa24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 PI4K2BQ8TCG2 481 aa24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 TAF1P21675 1872 aa24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 LRP5O75197 1615 aa24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 CIAO1O76071 339 aa24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 ITGA6P23229 1130 aa24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 IFIT5Q13325 482 aaKnown RBP24.4■■□□□ 1.5
PPP1CA-204ENST00000526510 SSFA2P28290 1259 aa24.39■■□□□ 1.49
PPP1CA-204ENST00000526510 ERFEQ4G0M1 354 aa24.39■■□□□ 1.49
PPP1CA-204ENST00000526510 TLR7Q9NYK1 1049 aaKnown RBP24.39■■□□□ 1.49
PPP1CA-204ENST00000526510 IFIT2P09913 472 aaKnown RBP24.38■■□□□ 1.49
PPP1CA-204ENST00000526510 IL15P40933 162 aaPredicted RBP24.38■■□□□ 1.49
PPP1CA-204ENST00000526510 ZNF827Q17R98 1081 aa24.38■■□□□ 1.49
PPP1CA-204ENST00000526510 SETDB2Q96T68 719 aa24.38■■□□□ 1.49
PPP1CA-204ENST00000526510 CCDC8Q9H0W5 538 aaPredicted RBP24.38■■□□□ 1.49
PPP1CA-204ENST00000526510 COL4A1P02462 1669 aa24.38■■□□□ 1.49
PPP1CA-204ENST00000526510 TNNI3KQ59H18 835 aa24.37■■□□□ 1.49
PPP1CA-204ENST00000526510 TBC1D9Q6ZT07 1266 aa24.37■■□□□ 1.49
PPP1CA-204ENST00000526510 FPGT-TNNI3KV9GXZ4 949 aa24.37■■□□□ 1.49
PPP1CA-204ENST00000526510 TTC41PQ6P2S7 1318 aa24.37■■□□□ 1.49
PPP1CA-204ENST00000526510 AKT1S1Q96B36 256 aa24.37■■□□□ 1.49
PPP1CA-204ENST00000526510 ABCC12Q96J65 1359 aa24.36■■□□□ 1.49
PPP1CA-204ENST00000526510 ANKRD18BA2A2Z9 1011 aa24.36■■□□□ 1.49
PPP1CA-204ENST00000526510 CDC45O75419 566 aa24.36■■□□□ 1.49
PPP1CA-204ENST00000526510 FBXO3Q9UK99 471 aa24.36■■□□□ 1.49
PPP1CA-204ENST00000526510 ECHDC1Q9NTX5 307 aa24.35■■□□□ 1.49
PPP1CA-204ENST00000526510 GYS1P13807 737 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 TAF7LQ5H9L4 462 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 C3orf67Q6ZVT6 689 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 RIC1Q4ADV7 1423 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 TNRC6CQ9HCJ0 1690 aaKnown RBP24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 RTL9Q8NET4 1388 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 HMGB2P26583 209 aaKnown RBP24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 NFIXQ14938 502 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 SLC10A5Q5PT55 438 aa24.34■■□□□ 1.49
PPP1CA-204ENST00000526510 ZNF609O15014 1411 aa24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 A0A1B0GUL6 1792 aa24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 HSP90B1P14625 803 aaKnown RBP24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 NYXQ9GZU5 481 aa24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 GPR108Q9NPR9 543 aa24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 DBNLQ9UJU6 430 aaKnown RBP24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 RIPOR2Q9Y4F9 1068 aa24.33■■□□□ 1.49
PPP1CA-204ENST00000526510 NBPF5PQ86XG9 351 aaPredicted RBP24.32■■□□□ 1.48
PPP1CA-204ENST00000526510 SEC31BQ9NQW1 1179 aa24.32■■□□□ 1.48
PPP1CA-204ENST00000526510 GLRX3O76003 335 aaKnown RBP24.31■■□□□ 1.48
PPP1CA-204ENST00000526510 MAP4K4O95819 1239 aaPredicted RBP24.31■■□□□ 1.48
PPP1CA-204ENST00000526510 CCDC152Q4G0S7 254 aa24.31■■□□□ 1.48
PPP1CA-204ENST00000526510 CARMIL3Q8ND23 1372 aa24.31■■□□□ 1.48
PPP1CA-204ENST00000526510 LDHAL6AQ6ZMR3 332 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 GPATCH3Q96I76 525 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 DBNDD2Q9BQY9 259 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 TRIM6-TRIM34B2RNG4 842 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 ERC2O15083 957 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 MFAP1P55081 439 aaKnown RBP24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 CAMKK2Q96RR4 588 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 TFCP2L1Q9NZI6 479 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 CEP126Q9P2H0 1117 aa24.3■■□□□ 1.48
PPP1CA-204ENST00000526510 GTF2E1P29083 439 aaPredicted RBP24.29■■□□□ 1.48
PPP1CA-204ENST00000526510 SF3B3Q15393 1217 aaKnown RBP24.29■■□□□ 1.48
PPP1CA-204ENST00000526510 TPTE2Q6XPS3 522 aa24.29■■□□□ 1.48
PPP1CA-204ENST00000526510 CCDC24Q8N4L8 307 aa24.29■■□□□ 1.48
PPP1CA-204ENST00000526510 RILPL2Q969X0 211 aa24.29■■□□□ 1.48
PPP1CA-204ENST00000526510 ARAP2Q8WZ64 1704 aa24.28■■□□□ 1.48
PPP1CA-204ENST00000526510 TIMM10P62072 90 aa24.28■■□□□ 1.48
PPP1CA-204ENST00000526510 EZH2Q15910 746 aaKnown RBP24.28■■□□□ 1.48
PPP1CA-204ENST00000526510 QSER1Q2KHR3 1735 aa24.28■■□□□ 1.48
PPP1CA-204ENST00000526510 TM4SF1P30408 202 aa24.27■■□□□ 1.48
PPP1CA-204ENST00000526510 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
PPP1CA-204ENST00000526510 COL23A1Q86Y22 540 aaPredicted RBP24.27■■□□□ 1.48
PPP1CA-204ENST00000526510 CNNM1Q9NRU3 951 aa24.27■■□□□ 1.48
PPP1CA-204ENST00000526510 VGLL2Q8N8G2 317 aa24.27■■□□□ 1.48
PPP1CA-204ENST00000526510 A0A1B0GUL7 405 aa24.26■■□□□ 1.47
PPP1CA-204ENST00000526510 METTL24Q5JXM2 366 aa24.25■■□□□ 1.47
PPP1CA-204ENST00000526510 ILDR1Q86SU0 546 aaPredicted RBP24.25■■□□□ 1.47
PPP1CA-204ENST00000526510 TBC1D32Q96NH3 1257 aa24.25■■□□□ 1.47
PPP1CA-204ENST00000526510 NEUROD6Q96NK8 337 aa24.25■■□□□ 1.47
PPP1CA-204ENST00000526510 ATP5JP18859 108 aa24.24■■□□□ 1.47
PPP1CA-204ENST00000526510 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
PPP1CA-204ENST00000526510 CHMLP26374 656 aa24.24■■□□□ 1.47
PPP1CA-204ENST00000526510 BOLA2Q9H3K6 86 aa24.24■■□□□ 1.47
PPP1CA-204ENST00000526510 PNPLA7Q6ZV29 1317 aa24.23■■□□□ 1.47
PPP1CA-204ENST00000526510 ANP32AP39687 249 aaKnown RBP24.23■■□□□ 1.47
PPP1CA-204ENST00000526510 DDR1Q08345 913 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms