RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 KRT24Q2M2I5 525 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 NLRP10Q86W26 655 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 ZNF428Q96B54 188 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 WBP1LQ9NX94 342 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 GPRC5DQ9NZD1 345 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
CAPN1-204ENST00000526468 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
CAPN1-204ENST00000526468 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
CAPN1-204ENST00000526468 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
CAPN1-204ENST00000526468 ZNF316A6NFI3 1004 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-204ENST00000526468 GMPSP49915 693 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-204ENST00000526468 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
CAPN1-204ENST00000526468 ADARB2Q9NS39 739 aaKnown RBP15.31■□□□□ 0.04
CAPN1-204ENST00000526468 ZNRF3Q9ULT6 936 aa15.31■□□□□ 0.04
CAPN1-204ENST00000526468 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
CAPN1-204ENST00000526468 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-204ENST00000526468 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
CAPN1-204ENST00000526468 MAP2K1Q02750 393 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-204ENST00000526468 GRAPQ13588 217 aa15.3■□□□□ 0.04
CAPN1-204ENST00000526468 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
CAPN1-204ENST00000526468 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
CAPN1-204ENST00000526468 HDGFL1Q5TGJ6 251 aa15.3■□□□□ 0.04
CAPN1-204ENST00000526468 MPNDQ8N594 471 aa15.3■□□□□ 0.04
CAPN1-204ENST00000526468 GRAPLQ8TC17 118 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-204ENST00000526468 CAPNS2Q96L46 248 aa15.3■□□□□ 0.04
CAPN1-204ENST00000526468 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
CAPN1-204ENST00000526468 ECE1P42892 770 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 CXCL9Q07325 125 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 KIAA2012Q0VF49 1180 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 CIAPIN1Q6FI81 312 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 CYP4F22Q6NT55 531 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 RTFDC1Q9BY42 306 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-204ENST00000526468 VPS33BQ9H267 617 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
CAPN1-204ENST00000526468 BBOX1O75936 387 aa15.28■□□□□ 0.04
CAPN1-204ENST00000526468 RAD17O75943 681 aa15.28■□□□□ 0.04
CAPN1-204ENST00000526468 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
CAPN1-204ENST00000526468 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
CAPN1-204ENST00000526468 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
CAPN1-204ENST00000526468 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-204ENST00000526468 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
CAPN1-204ENST00000526468 TLL2Q9Y6L7 1015 aa15.27■□□□□ 0.04
CAPN1-204ENST00000526468 PDE4DIPQ5VU43 2346 aa15.27■□□□□ 0.03
CAPN1-204ENST00000526468 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
CAPN1-204ENST00000526468 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
CAPN1-204ENST00000526468 TRPM4Q8TD43 1214 aa15.26■□□□□ 0.03
CAPN1-204ENST00000526468 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
CAPN1-204ENST00000526468 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
CAPN1-204ENST00000526468 CHL1O00533 1208 aa15.25■□□□□ 0.03
CAPN1-204ENST00000526468 HOXB7P09629 217 aa15.25■□□□□ 0.03
CAPN1-204ENST00000526468 TNIP1Q15025 636 aa15.25■□□□□ 0.03
CAPN1-204ENST00000526468 CST9Q5W186 159 aa15.25■□□□□ 0.03
CAPN1-204ENST00000526468 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
CAPN1-204ENST00000526468 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
CAPN1-204ENST00000526468 SHTN1A0MZ66 631 aa15.24■□□□□ 0.03
CAPN1-204ENST00000526468 YDJCA8MPS7 323 aa15.24■□□□□ 0.03
CAPN1-204ENST00000526468 ATP5J2-PTCD1G3V325 749 aa15.24■□□□□ 0.03
CAPN1-204ENST00000526468 RTL5Q5HYW3 569 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-204ENST00000526468 MICALL2Q8IY33 904 aa15.24■□□□□ 0.03
CAPN1-204ENST00000526468 FAM89AQ96GI7 184 aa15.24■□□□□ 0.03
CAPN1-204ENST00000526468 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-204ENST00000526468 DBF4Q9UBU7 674 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-204ENST00000526468 AOC2O75106 756 aa15.23■□□□□ 0.03
CAPN1-204ENST00000526468 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
CAPN1-204ENST00000526468 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
CAPN1-204ENST00000526468 ABHD8Q96I13 439 aa15.23■□□□□ 0.03
CAPN1-204ENST00000526468 DBNDD1Q9H9R9 158 aa15.23■□□□□ 0.03
CAPN1-204ENST00000526468 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
CAPN1-204ENST00000526468 PAPPA2Q9BXP8 1791 aa15.22■□□□□ 0.03
CAPN1-204ENST00000526468 GOLGA2Q08379 1002 aa15.22■□□□□ 0.03
CAPN1-204ENST00000526468 ANKRD13DQ6ZTN6 518 aa15.22■□□□□ 0.03
CAPN1-204ENST00000526468 SAPCD2Q86UD0 394 aa15.22■□□□□ 0.03
CAPN1-204ENST00000526468 ISCA1Q9BUE6 129 aa15.22■□□□□ 0.03
CAPN1-204ENST00000526468 HYPKQ9NX55 129 aa15.22■□□□□ 0.03
CAPN1-204ENST00000526468 NSFL1CQ9UNZ2 370 aaKnown RBP15.22■□□□□ 0.03
CAPN1-204ENST00000526468 C6orf229H3BNL8 230 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 H7C1D1 291 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 PSMD14O00487 310 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 DUSP27Q5VZP5 1158 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
CAPN1-204ENST00000526468 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
CAPN1-204ENST00000526468 CNOT7Q9UIV1 285 aaKnown RBP15.21■□□□□ 0.03
CAPN1-204ENST00000526468 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-204ENST00000526468 IRS4O14654 1257 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-204ENST00000526468 ECE2O60344 883 aa15.2■□□□□ 0.02
CAPN1-204ENST00000526468 HIRAP54198 1017 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-204ENST00000526468 GPSM2P81274 684 aa15.2■□□□□ 0.02
CAPN1-204ENST00000526468 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
CAPN1-204ENST00000526468 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
CAPN1-204ENST00000526468 MAP2K2P36507 400 aa15.19■□□□□ 0.02
CAPN1-204ENST00000526468 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
CAPN1-204ENST00000526468 TBC1D10BQ4KMP7 808 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-204ENST00000526468 CDC37L1Q7L3B6 337 aa15.19■□□□□ 0.02
CAPN1-204ENST00000526468 EYA3Q99504 573 aa15.19■□□□□ 0.02
CAPN1-204ENST00000526468 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
CAPN1-204ENST00000526468 DOK7Q18PE1 504 aa15.18■□□□□ 0.02
CAPN1-204ENST00000526468 SAMD7Q7Z3H4 446 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms