RNA–Protein interactions for RNA: ENST00000526317.5

CSRP1-208, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 374 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-208ENST00000526317 PLA2G12BQ9BX93 195 aa13.28□□□□□ -0.28
CSRP1-208ENST00000526317 SEC31BQ9NQW1 1179 aa13.28□□□□□ -0.28
CSRP1-208ENST00000526317 GRM8O00222 908 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 PPEF1O14829 653 aaPredicted RBP13.27□□□□□ -0.29
CSRP1-208ENST00000526317 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 CC2D2BQ6DHV5 1058 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 SLC51AQ86UW1 340 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 RTKN2Q8IZC4 609 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 CELF1Q92879 486 aaKnown RBP13.27□□□□□ -0.29
CSRP1-208ENST00000526317 CCDC85AQ96PX6 553 aaPredicted RBP13.27□□□□□ -0.29
CSRP1-208ENST00000526317 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.29
CSRP1-208ENST00000526317 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.29
CSRP1-208ENST00000526317 ATP6V0A2Q9Y487 856 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 TAF1P21675 1872 aa13.27□□□□□ -0.29
CSRP1-208ENST00000526317 CSF1RP07333 972 aa13.26□□□□□ -0.29
CSRP1-208ENST00000526317 LMNB1P20700 586 aa13.26□□□□□ -0.29
CSRP1-208ENST00000526317 CTSWP56202 376 aa13.26□□□□□ -0.29
CSRP1-208ENST00000526317 RPS8P62241 208 aaKnown RBP13.26□□□□□ -0.29
CSRP1-208ENST00000526317 FOXO4P98177 505 aa13.26□□□□□ -0.29
CSRP1-208ENST00000526317 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
CSRP1-208ENST00000526317 UTRNP46939 3433 aa13.26□□□□□ -0.29
CSRP1-208ENST00000526317 SBF1O95248 1867 aa13.25□□□□□ -0.29
CSRP1-208ENST00000526317 FER1L6Q2WGJ9 1857 aa13.25□□□□□ -0.29
CSRP1-208ENST00000526317 LTBP3Q9NS15 1303 aa13.25□□□□□ -0.29
CSRP1-208ENST00000526317 IPO8O15397 1037 aaKnown RBP13.25□□□□□ -0.29
CSRP1-208ENST00000526317 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
CSRP1-208ENST00000526317 FKBP4Q02790 459 aaKnown RBP eCLIP13.25□□□□□ -0.29
CSRP1-208ENST00000526317 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
CSRP1-208ENST00000526317 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
CSRP1-208ENST00000526317 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
CSRP1-208ENST00000526317 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
CSRP1-208ENST00000526317 UTYO14607 1347 aa13.24□□□□□ -0.29
CSRP1-208ENST00000526317 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
CSRP1-208ENST00000526317 CCT4P50991 539 aaKnown RBP13.24□□□□□ -0.29
CSRP1-208ENST00000526317 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
CSRP1-208ENST00000526317 TMC4Q7Z404 712 aa13.24□□□□□ -0.29
CSRP1-208ENST00000526317 TMX4Q9H1E5 349 aaPredicted RBP13.24□□□□□ -0.29
CSRP1-208ENST00000526317 GREM2Q9H772 168 aa13.24□□□□□ -0.29
CSRP1-208ENST00000526317 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
CSRP1-208ENST00000526317 CCDC88AQ3V6T2 1871 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 MPNDQ8N594 471 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 PSMD1Q99460 953 aa13.23□□□□□ -0.29
CSRP1-208ENST00000526317 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
CSRP1-208ENST00000526317 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
CSRP1-208ENST00000526317 COL4A1P02462 1669 aa13.22□□□□□ -0.29
CSRP1-208ENST00000526317 TRIM27P14373 513 aa13.22□□□□□ -0.29
CSRP1-208ENST00000526317 ZKSCAN2Q63HK3 967 aa13.22□□□□□ -0.29
CSRP1-208ENST00000526317 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
CSRP1-208ENST00000526317 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
CSRP1-208ENST00000526317 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
CSRP1-208ENST00000526317 YTHDC1Q96MU7 727 aaKnown RBP13.22□□□□□ -0.29
CSRP1-208ENST00000526317 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
CSRP1-208ENST00000526317 ITGA6P23229 1130 aa13.21□□□□□ -0.29
CSRP1-208ENST00000526317 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
CSRP1-208ENST00000526317 CDC5LQ99459 802 aaKnown RBP13.21□□□□□ -0.29
CSRP1-208ENST00000526317 RTFDC1Q9BY42 306 aaPredicted RBP13.21□□□□□ -0.29
CSRP1-208ENST00000526317 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
CSRP1-208ENST00000526317 MYH3P11055 1940 aa13.2□□□□□ -0.3
CSRP1-208ENST00000526317 ANKRD18BA2A2Z9 1011 aa13.2□□□□□ -0.3
CSRP1-208ENST00000526317 IARSP41252 1262 aaKnown RBP13.2□□□□□ -0.3
CSRP1-208ENST00000526317 GPSM2P81274 684 aa13.2□□□□□ -0.3
CSRP1-208ENST00000526317 FAM161AQ3B820 660 aa13.2□□□□□ -0.3
CSRP1-208ENST00000526317 DPP8Q6V1X1 898 aaPredicted RBP13.2□□□□□ -0.3
CSRP1-208ENST00000526317 BSDC1Q9NW68 430 aaPredicted RBP13.2□□□□□ -0.3
CSRP1-208ENST00000526317 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
CSRP1-208ENST00000526317 SUPT20HQ8NEM7 779 aa13.19□□□□□ -0.3
CSRP1-208ENST00000526317 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
CSRP1-208ENST00000526317 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
CSRP1-208ENST00000526317 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
CSRP1-208ENST00000526317 CHMP3Q9Y3E7 222 aa13.19□□□□□ -0.3
CSRP1-208ENST00000526317 IGHMBP2P38935 993 aaKnown RBP13.18□□□□□ -0.3
CSRP1-208ENST00000526317 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
CSRP1-208ENST00000526317 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-208ENST00000526317 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
CSRP1-208ENST00000526317 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
CSRP1-208ENST00000526317 BICC1Q9H694 974 aaKnown RBP13.18□□□□□ -0.3
CSRP1-208ENST00000526317 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
CSRP1-208ENST00000526317 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
CSRP1-208ENST00000526317 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
CSRP1-208ENST00000526317 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
CSRP1-208ENST00000526317 GLTPD2A6NH11 291 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
CSRP1-208ENST00000526317 AOC3Q16853 763 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
CSRP1-208ENST00000526317 LARGE2Q8N3Y3 721 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 TMEM57Q8N5G2 664 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 ZNF594Q96JF6 807 aaPredicted RBP13.17□□□□□ -0.3
CSRP1-208ENST00000526317 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 MEIS3Q99687 375 aa13.17□□□□□ -0.3
CSRP1-208ENST00000526317 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
CSRP1-208ENST00000526317 FZD9O00144 591 aa13.16□□□□□ -0.3
CSRP1-208ENST00000526317 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms