RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 NFKB1P19838 968 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 FSTP19883 344 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 ARID4AP29374 1257 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 ELMSAN1Q6PJG2 1045 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 DEPDC4Q8N2C3 294 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 LARGE2Q8N3Y3 721 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 DCAF11Q8TEB1 546 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 MEGF10Q96KG7 1140 aa4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 GZF1Q9H116 711 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 ZNF777Q9ULD5 760 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC4-207ENST00000526141 PALM3A6NDB9 673 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 PTCD1O75127 700 aaKnown RBP4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 CPB1P15086 417 aa4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 RBM25P49756 843 aaKnown RBP4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 PLEKHM2Q8IWE5 1019 aa4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 DZIP1LQ8IYY4 767 aaKnown RBP4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 TMEM130Q8N3G9 435 aa4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 RETREG2Q8NC44 543 aa4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 AKTIPQ9H8T0 292 aa4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 C11orf16Q9NQ32 467 aa4.85□□□□□ -1.63
TRAPPC4-207ENST00000526141 ATAD2Q6PL18 1390 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 PATL2C9JE40 543 aaKnown RBP4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 TGFBR3LH3BV60 316 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 SSTR4P31391 388 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 CD97P48960 835 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 PDE4CQ08493 712 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 GRIK5Q16478 980 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 FNBP4Q8N3X1 1017 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 TRPM4Q8TD43 1214 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 LPIN3Q9BQK8 851 aa4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 C2orf49Q9BVC5 232 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 SRA1Q9HD15 236 aaKnown RBP4.84□□□□□ -1.63
TRAPPC4-207ENST00000526141 E9PSI1 815 aa4.83□□□□□ -1.64
TRAPPC4-207ENST00000526141 DLL1O00548 723 aa4.83□□□□□ -1.64
TRAPPC4-207ENST00000526141 RTN1Q16799 776 aa4.83□□□□□ -1.64
TRAPPC4-207ENST00000526141 PERM1Q5SV97 790 aa4.83□□□□□ -1.64
TRAPPC4-207ENST00000526141 FOXD4L4Q8WXT5 416 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC4-207ENST00000526141 KIAA1024Q9UPX6 916 aa4.83□□□□□ -1.64
TRAPPC4-207ENST00000526141 PPP1R15AO75807 674 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 HSP90B1P14625 803 aaKnown RBP4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 TAL1P17542 331 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 CLDN10P78369 228 aa4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 GPLD1P80108 840 aa4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 DHX32Q7L7V1 743 aaKnown RBP4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 MAP4K3Q8IVH8 894 aa4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 SIX5Q8N196 739 aa4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 OGFOD1Q8N543 542 aa4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 TSEN2Q8NCE0 465 aaKnown RBP4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 NGLY1Q96IV0 654 aa4.82□□□□□ -1.64
TRAPPC4-207ENST00000526141 TTBK1Q5TCY1 1321 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 USP17L3A6NCW0 530 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 USP17L4A6NCW7 530 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 C21orf2O43822 256 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 DEAF1O75398 565 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 USP17L2Q6R6M4 530 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 USP17L1Q7RTZ2 530 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 CHMP7Q8WUX9 453 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 SCG3Q8WXD2 468 aaKnown RBP4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 SMG9Q9H0W8 520 aaKnown RBP4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 MKRN1Q9UHC7 482 aaKnown RBP4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 RAXQ9Y2V3 346 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 COG6Q9Y2V7 657 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 RNF114Q9Y508 228 aa4.81□□□□□ -1.64
TRAPPC4-207ENST00000526141 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 ZBTB42B2RXF5 422 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 F8W735 103 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 IGLV1-40P01703 118 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 RARAP10276 462 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 GRIK1P39086 918 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 NRLP54845 237 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 GP2P55259 537 aaKnown RBP4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 INTS5Q6P9B9 1019 aaKnown RBP4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 ZNF428Q96B54 188 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 STOML1Q9UBI4 398 aa4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 DMGDHQ9UI17 866 aaKnown RBP4.8□□□□□ -1.64
TRAPPC4-207ENST00000526141 ATP9BO43861 1147 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 ALX3O95076 343 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 EIF2AK2P19525 551 aaKnown RBP4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 TARSP26639 723 aaKnown RBP4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 INPP5BP32019 993 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 IDH3AP50213 366 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 ARSDP51689 593 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 FZD5Q13467 585 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 KRT25Q7Z3Z0 450 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 CACTIN-AS1Q8N1I8 211 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 POM121Q96HA1 1249 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 MUC3BQ9H195 1237 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 RBSNQ9H1K0 784 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 ZFATQ9P243 1243 aa4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 OAS3Q9Y6K5 1087 aaKnown RBP4.79□□□□□ -1.64
TRAPPC4-207ENST00000526141 DHX15O43143 795 aaKnown RBP4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 GLB1P16278 677 aa4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 CDK11BP21127 795 aaKnown RBP4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 SEC13P55735 322 aa4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 MLLT1Q03111 559 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 KCNA1Q09470 495 aa4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 Q6ZS46 218 aa4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 PLD4Q96BZ4 506 aa4.78□□□□□ -1.64
TRAPPC4-207ENST00000526141 IFT43Q96FT9 208 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms