RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 DMGDHQ9UI17 866 aaKnown RBP7.95□□□□□ -1.14
CSDE1-211ENST00000525970 SELPP16109 830 aa7.94□□□□□ -1.14
CSDE1-211ENST00000525970 PDE4CQ08493 712 aa7.94□□□□□ -1.14
CSDE1-211ENST00000525970 PSAPL1Q6NUJ1 521 aa7.94□□□□□ -1.14
CSDE1-211ENST00000525970 TXNRD3Q86VQ6 643 aa7.94□□□□□ -1.14
CSDE1-211ENST00000525970 HINFPQ9BQA5 517 aa7.94□□□□□ -1.14
CSDE1-211ENST00000525970 IGFLR1Q9H665 355 aa7.94□□□□□ -1.14
CSDE1-211ENST00000525970 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
CSDE1-211ENST00000525970 RGS9O75916 674 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-211ENST00000525970 MAP3K6O95382 1288 aa7.93□□□□□ -1.14
CSDE1-211ENST00000525970 NFKB1P19838 968 aa7.93□□□□□ -1.14
CSDE1-211ENST00000525970 AFF1P51825 1210 aaKnown RBP7.93□□□□□ -1.14
CSDE1-211ENST00000525970 ILDR2Q71H61 639 aa7.93□□□□□ -1.14
CSDE1-211ENST00000525970 RGS22Q8NE09 1264 aa7.93□□□□□ -1.14
CSDE1-211ENST00000525970 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
CSDE1-211ENST00000525970 NOVA2Q9UNW9 492 aaKnown RBP7.93□□□□□ -1.14
CSDE1-211ENST00000525970 DTWD1Q8N5C7 304 aa7.92□□□□□ -1.14
CSDE1-211ENST00000525970 NUDT8Q8WV74 236 aa7.92□□□□□ -1.14
CSDE1-211ENST00000525970 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
CSDE1-211ENST00000525970 NAGPAQ9UK23 515 aa7.92□□□□□ -1.14
CSDE1-211ENST00000525970 BCS1LQ9Y276 419 aa7.92□□□□□ -1.14
CSDE1-211ENST00000525970 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
CSDE1-211ENST00000525970 SCO2A0A1W2PP80 73 aa7.91□□□□□ -1.14
CSDE1-211ENST00000525970 INPP5BP32019 993 aa7.91□□□□□ -1.14
CSDE1-211ENST00000525970 FOXD4L6Q3SYB3 417 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-211ENST00000525970 PRSS36Q5K4E3 855 aa7.91□□□□□ -1.14
CSDE1-211ENST00000525970 FOXD4L3Q6VB84 417 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-211ENST00000525970 FMR1NBQ8N0W7 255 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-211ENST00000525970 FRRS1LQ9P0K9 344 aa7.91□□□□□ -1.14
CSDE1-211ENST00000525970 LGR5O75473 907 aa7.9□□□□□ -1.14
CSDE1-211ENST00000525970 IDH3AP50213 366 aa7.9□□□□□ -1.14
CSDE1-211ENST00000525970 FOXO3O43524 673 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 ATG7O95352 703 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 ARSDP51689 593 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 FAM35AQ86V20 835 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 TRPM4Q8TD43 1214 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 TTC9Q92623 222 aa7.89□□□□□ -1.15
CSDE1-211ENST00000525970 GZF1Q9H116 711 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-211ENST00000525970 BRD1O95696 1058 aa7.88□□□□□ -1.15
CSDE1-211ENST00000525970 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
CSDE1-211ENST00000525970 ARID4AP29374 1257 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-211ENST00000525970 TMCO4Q5TGY1 634 aa7.88□□□□□ -1.15
CSDE1-211ENST00000525970 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
CSDE1-211ENST00000525970 DMRTC2Q8IXT2 367 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-211ENST00000525970 MYO19Q96H55 970 aa7.88□□□□□ -1.15
CSDE1-211ENST00000525970 PSMG3-AS1Q96PY0 264 aa7.88□□□□□ -1.15
CSDE1-211ENST00000525970 ZFP64Q9NPA5 681 aa7.88□□□□□ -1.15
CSDE1-211ENST00000525970 PATL2C9JE40 543 aaKnown RBP7.87□□□□□ -1.15
CSDE1-211ENST00000525970 WEE1P30291 646 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 GPLD1P80108 840 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 KCNA1Q09470 495 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 ELOAQ14241 798 aaKnown RBP7.87□□□□□ -1.15
CSDE1-211ENST00000525970 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 DHX32Q7L7V1 743 aaKnown RBP7.87□□□□□ -1.15
CSDE1-211ENST00000525970 LPIN3Q9BQK8 851 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-211ENST00000525970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.87□□□□□ -1.15
CSDE1-211ENST00000525970 KLK14Q9P0G3 267 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 USP21Q9UK80 565 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 ZMIZ1Q9ULJ6 1067 aa7.87□□□□□ -1.15
CSDE1-211ENST00000525970 DGKZQ13574 1117 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 GRIK5Q16478 980 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 C11orf91Q3C1V1 193 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 FBXO11Q86XK2 927 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 VTI1AQ96AJ9 217 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 QTRT2Q9H974 415 aaKnown RBP7.86□□□□□ -1.15
CSDE1-211ENST00000525970 ZFATQ9P243 1243 aa7.86□□□□□ -1.15
CSDE1-211ENST00000525970 MICAL2O94851 1124 aa7.85□□□□□ -1.15
CSDE1-211ENST00000525970 CPB1P15086 417 aa7.85□□□□□ -1.15
CSDE1-211ENST00000525970 MFAP1P55081 439 aaKnown RBP7.85□□□□□ -1.15
CSDE1-211ENST00000525970 PERM1Q5SV97 790 aa7.85□□□□□ -1.15
CSDE1-211ENST00000525970 ELMSAN1Q6PJG2 1045 aa7.85□□□□□ -1.15
CSDE1-211ENST00000525970 WFDC8Q8IUA0 241 aa7.85□□□□□ -1.15
CSDE1-211ENST00000525970 IFT43Q96FT9 208 aa7.85□□□□□ -1.15
CSDE1-211ENST00000525970 EGFRP00533 1210 aa7.84□□□□□ -1.15
CSDE1-211ENST00000525970 RARAP10276 462 aa7.84□□□□□ -1.15
CSDE1-211ENST00000525970 NRLP54845 237 aa7.84□□□□□ -1.15
CSDE1-211ENST00000525970 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
CSDE1-211ENST00000525970 TP53INP1Q96A56 240 aa7.84□□□□□ -1.15
CSDE1-211ENST00000525970 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
CSDE1-211ENST00000525970 TMEM88BA6NKF7 163 aa7.83□□□□□ -1.16
CSDE1-211ENST00000525970 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
CSDE1-211ENST00000525970 TARSP26639 723 aaKnown RBP7.83□□□□□ -1.16
CSDE1-211ENST00000525970 LRP8Q14114 963 aa7.83□□□□□ -1.16
CSDE1-211ENST00000525970 SWI5Q1ZZU3 235 aa7.83□□□□□ -1.16
CSDE1-211ENST00000525970 SASH3O75995 380 aa7.82□□□□□ -1.16
CSDE1-211ENST00000525970 IGF2-ASQ6U949 168 aa7.82□□□□□ -1.16
CSDE1-211ENST00000525970 KRT25Q7Z3Z0 450 aa7.82□□□□□ -1.16
CSDE1-211ENST00000525970 WFDC12Q8WWY7 111 aa7.82□□□□□ -1.16
CSDE1-211ENST00000525970 PRIMPOLQ96LW4 560 aa7.82□□□□□ -1.16
CSDE1-211ENST00000525970 TLR7Q9NYK1 1049 aaKnown RBP7.82□□□□□ -1.16
CSDE1-211ENST00000525970 RTCBQ9Y3I0 505 aaKnown RBP7.82□□□□□ -1.16
CSDE1-211ENST00000525970 PRMT3O60678 531 aa7.81□□□□□ -1.16
CSDE1-211ENST00000525970 NBPF11Q86T75 865 aa7.81□□□□□ -1.16
CSDE1-211ENST00000525970 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
CSDE1-211ENST00000525970 OPLAHO14841 1288 aa7.8□□□□□ -1.16
CSDE1-211ENST00000525970 HOXD8P13378 290 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-211ENST00000525970 FAM69CQ0P6D2 419 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms