RNA–Protein interactions for RNA: ENST00000525957.1

ME3-204, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-204ENST00000525957 ZNRF3Q9ULT6 936 aa20.22■□□□□ 0.83
ME3-204ENST00000525957 DUOX1Q9NRD9 1551 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 BBOX1O75936 387 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 RAD17O75943 681 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 CTCFP49711 727 aaPredicted RBP20.21■□□□□ 0.83
ME3-204ENST00000525957 CXCL9Q07325 125 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
ME3-204ENST00000525957 USP50Q70EL3 339 aaPredicted RBP20.21■□□□□ 0.83
ME3-204ENST00000525957 SP8Q8IXZ3 490 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 TRPM7Q96QT4 1865 aa20.21■□□□□ 0.83
ME3-204ENST00000525957 WDR33Q9C0J8 1336 aaKnown RBP20.21■□□□□ 0.83
ME3-204ENST00000525957 PLBD2Q8NHP8 589 aa20.2■□□□□ 0.82
ME3-204ENST00000525957 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
ME3-204ENST00000525957 RTFDC1Q9BY42 306 aaPredicted RBP20.2■□□□□ 0.82
ME3-204ENST00000525957 ADARB2Q9NS39 739 aaKnown RBP20.2■□□□□ 0.82
ME3-204ENST00000525957 LRRC37AA6NMS7 1700 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 LBX1P52954 281 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 KIAA2012Q0VF49 1180 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 CIAPIN1Q6FI81 312 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 FAM89AQ96GI7 184 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 COL4A1P02462 1669 aa20.19■□□□□ 0.82
ME3-204ENST00000525957 DUSP27Q5VZP5 1158 aa20.18■□□□□ 0.82
ME3-204ENST00000525957 VPS33BQ9H267 617 aa20.18■□□□□ 0.82
ME3-204ENST00000525957 CYP4F22Q6NT55 531 aa20.17■□□□□ 0.82
ME3-204ENST00000525957 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
ME3-204ENST00000525957 CAPNS2Q96L46 248 aa20.17■□□□□ 0.82
ME3-204ENST00000525957 PRDM10Q9NQV6 1147 aa20.17■□□□□ 0.82
ME3-204ENST00000525957 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
ME3-204ENST00000525957 THSD7BQ9C0I4 1608 aa20.16■□□□□ 0.82
ME3-204ENST00000525957 SHTN1A0MZ66 631 aa20.16■□□□□ 0.82
ME3-204ENST00000525957 HOXB7P09629 217 aa20.16■□□□□ 0.82
ME3-204ENST00000525957 CST9Q5W186 159 aa20.16■□□□□ 0.82
ME3-204ENST00000525957 CELF1Q92879 486 aaKnown RBP20.16■□□□□ 0.82
ME3-204ENST00000525957 GLIS2Q9BZE0 524 aaPredicted RBP20.16■□□□□ 0.82
ME3-204ENST00000525957 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
ME3-204ENST00000525957 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
ME3-204ENST00000525957 YDJCA8MPS7 323 aa20.15■□□□□ 0.82
ME3-204ENST00000525957 HSPA8P11142 646 aaKnown RBP20.15■□□□□ 0.82
ME3-204ENST00000525957 TNIP1Q15025 636 aa20.15■□□□□ 0.82
ME3-204ENST00000525957 TRPM4Q8TD43 1214 aa20.15■□□□□ 0.82
ME3-204ENST00000525957 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
ME3-204ENST00000525957 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
ME3-204ENST00000525957 RIMBP2O15034 1052 aa20.14■□□□□ 0.81
ME3-204ENST00000525957 CELF2O95319 508 aaKnown RBP20.14■□□□□ 0.81
ME3-204ENST00000525957 MAP2K1Q02750 393 aaPredicted RBP20.14■□□□□ 0.81
ME3-204ENST00000525957 DBNDD1Q9H9R9 158 aa20.14■□□□□ 0.81
ME3-204ENST00000525957 HYPKQ9NX55 129 aa20.14■□□□□ 0.81
ME3-204ENST00000525957 C6orf229H3BNL8 230 aa20.13■□□□□ 0.81
ME3-204ENST00000525957 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
ME3-204ENST00000525957 ECE1P42892 770 aa20.13■□□□□ 0.81
ME3-204ENST00000525957 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
ME3-204ENST00000525957 GPR101Q96P66 508 aaPredicted RBP20.13■□□□□ 0.81
ME3-204ENST00000525957 NSFL1CQ9UNZ2 370 aaKnown RBP20.13■□□□□ 0.81
ME3-204ENST00000525957 TLL2Q9Y6L7 1015 aa20.13■□□□□ 0.81
ME3-204ENST00000525957 CDHR2Q9BYE9 1310 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 IRS4O14654 1257 aaPredicted RBP20.12■□□□□ 0.81
ME3-204ENST00000525957 APAF1O14727 1248 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 GPSM2P81274 684 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 WASHC4Q2M389 1173 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 MICALL2Q8IY33 904 aa20.12■□□□□ 0.81
ME3-204ENST00000525957 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
ME3-204ENST00000525957 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
ME3-204ENST00000525957 AOC2O75106 756 aa20.11■□□□□ 0.81
ME3-204ENST00000525957 HIRAP54198 1017 aaPredicted RBP20.11■□□□□ 0.81
ME3-204ENST00000525957 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
ME3-204ENST00000525957 TSKSQ9UJT2 592 aa20.11■□□□□ 0.81
ME3-204ENST00000525957 PSMD14O00487 310 aa20.1■□□□□ 0.81
ME3-204ENST00000525957 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
ME3-204ENST00000525957 DOK7Q18PE1 504 aa20.1■□□□□ 0.81
ME3-204ENST00000525957 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
ME3-204ENST00000525957 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
ME3-204ENST00000525957 H7C1D1 291 aa20.09■□□□□ 0.81
ME3-204ENST00000525957 JARID2Q92833 1246 aaPredicted RBP20.09■□□□□ 0.81
ME3-204ENST00000525957 MYD88Q99836 296 aa20.09■□□□□ 0.81
ME3-204ENST00000525957 POLLQ9UGP5 575 aa20.09■□□□□ 0.81
ME3-204ENST00000525957 ECE2O60344 883 aa20.08■□□□□ 0.81
ME3-204ENST00000525957 TBC1D10BQ4KMP7 808 aaPredicted RBP20.08■□□□□ 0.81
ME3-204ENST00000525957 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.81
ME3-204ENST00000525957 SAPCD2Q86UD0 394 aa20.08■□□□□ 0.81
ME3-204ENST00000525957 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
ME3-204ENST00000525957 IFT57Q9NWB7 429 aa20.08■□□□□ 0.81
ME3-204ENST00000525957 ZNF853P0CG23 659 aa20.07■□□□□ 0.8
ME3-204ENST00000525957 DLK2Q6UY11 383 aa20.07■□□□□ 0.8
ME3-204ENST00000525957 SEC31BQ9NQW1 1179 aa20.07■□□□□ 0.8
ME3-204ENST00000525957 EGFRP00533 1210 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 GNAI1P63096 354 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 RBM26Q5T8P6 1007 aaKnown RBP20.06■□□□□ 0.8
ME3-204ENST00000525957 CDC37L1Q7L3B6 337 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 USP48Q86UV5 1035 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 ZBTB38Q8NAP3 1195 aaPredicted RBP20.06■□□□□ 0.8
ME3-204ENST00000525957 EYA3Q99504 573 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 KCNQ5Q9NR82 932 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 RTL9Q8NET4 1388 aa20.06■□□□□ 0.8
ME3-204ENST00000525957 UFL1O94874 794 aa20.05■□□□□ 0.8
ME3-204ENST00000525957 RPS8P62241 208 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms