RNA–Protein interactions for RNA: ENST00000525835.5

SOX6-206, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-206ENST00000525835 PDE8AO60658 829 aa29.15■■■□□ 2.26
SOX6-206ENST00000525835 SP8Q8IXZ3 490 aa29.15■■■□□ 2.26
SOX6-206ENST00000525835 ZNF277Q9NRM2 450 aaPredicted RBP29.14■■■□□ 2.26
SOX6-206ENST00000525835 LRRC37AA6NMS7 1700 aa29.14■■■□□ 2.25
SOX6-206ENST00000525835 GLTPD2A6NH11 291 aa29.13■■■□□ 2.25
SOX6-206ENST00000525835 KIF3CO14782 793 aa29.13■■■□□ 2.25
SOX6-206ENST00000525835 GCKRQ14397 625 aa29.13■■■□□ 2.25
SOX6-206ENST00000525835 H7C1W4 665 aa29.12■■■□□ 2.25
SOX6-206ENST00000525835 CT47B1P0C2W7 299 aaPredicted RBP29.12■■■□□ 2.25
SOX6-206ENST00000525835 IARSP41252 1262 aaKnown RBP29.12■■■□□ 2.25
SOX6-206ENST00000525835 JARID2Q92833 1246 aaPredicted RBP29.12■■■□□ 2.25
SOX6-206ENST00000525835 MYH3P11055 1940 aa29.12■■■□□ 2.25
SOX6-206ENST00000525835 F6X3S4 739 aa29.11■■■□□ 2.25
SOX6-206ENST00000525835 CCDC152Q4G0S7 254 aa29.11■■■□□ 2.25
SOX6-206ENST00000525835 SLC51AQ86UW1 340 aa29.11■■■□□ 2.25
SOX6-206ENST00000525835 MRPL50Q8N5N7 158 aaKnown RBP29.11■■■□□ 2.25
SOX6-206ENST00000525835 NMRK2Q9NPI5 230 aa29.11■■■□□ 2.25
SOX6-206ENST00000525835 C1QTNF8P60827 252 aa29.1■■■□□ 2.25
SOX6-206ENST00000525835 BEND3Q5T5X7 828 aa29.1■■■□□ 2.25
SOX6-206ENST00000525835 CELF1Q92879 486 aaKnown RBP29.1■■■□□ 2.25
SOX6-206ENST00000525835 ALDH1L2Q3SY69 923 aa29.09■■■□□ 2.25
SOX6-206ENST00000525835 DPY19L2Q6NUT2 758 aa29.09■■■□□ 2.25
SOX6-206ENST00000525835 SSH1Q8WYL5 1049 aa29.09■■■□□ 2.25
SOX6-206ENST00000525835 RTFDC1Q9BY42 306 aaPredicted RBP29.09■■■□□ 2.25
SOX6-206ENST00000525835 COL4A1P02462 1669 aa29.09■■■□□ 2.25
SOX6-206ENST00000525835 CTSWP56202 376 aa29.08■■■□□ 2.25
SOX6-206ENST00000525835 UBE3BQ7Z3V4 1068 aa29.08■■■□□ 2.25
SOX6-206ENST00000525835 VPS33BQ9H267 617 aa29.08■■■□□ 2.25
SOX6-206ENST00000525835 PTPRCP08575 1304 aa29.07■■■□□ 2.24
SOX6-206ENST00000525835 CASP7P55210 303 aa29.07■■■□□ 2.24
SOX6-206ENST00000525835 PLA2G12BQ9BX93 195 aa29.07■■■□□ 2.24
SOX6-206ENST00000525835 WDR90Q96KV7 1748 aa29.06■■■□□ 2.24
SOX6-206ENST00000525835 RPS8P62241 208 aaKnown RBP29.06■■■□□ 2.24
SOX6-206ENST00000525835 SUPT20HQ8NEM7 779 aa29.06■■■□□ 2.24
SOX6-206ENST00000525835 RTL9Q8NET4 1388 aa29.05■■■□□ 2.24
SOX6-206ENST00000525835 DPP8Q6V1X1 898 aaPredicted RBP29.05■■■□□ 2.24
SOX6-206ENST00000525835 MPNDQ8N594 471 aa29.05■■■□□ 2.24
SOX6-206ENST00000525835 TTLL11Q8NHH1 800 aa29.05■■■□□ 2.24
SOX6-206ENST00000525835 HNRNPUQ00839 825 aaKnown RBP eCLIP29.04■■■□□ 2.24
SOX6-206ENST00000525835 RRAGCQ9HB90 399 aa29.04■■■□□ 2.24
SOX6-206ENST00000525835 SEC31BQ9NQW1 1179 aa29.04■■■□□ 2.24
SOX6-206ENST00000525835 FZD9O00144 591 aa29.03■■■□□ 2.24
SOX6-206ENST00000525835 ALDH1L1O75891 902 aa29.03■■■□□ 2.24
SOX6-206ENST00000525835 JDP2Q8WYK2 163 aa29.03■■■□□ 2.24
SOX6-206ENST00000525835 COL4A5P29400 1685 aa29.02■■■□□ 2.24
SOX6-206ENST00000525835 DUOX1Q9NRD9 1551 aa29.02■■■□□ 2.24
SOX6-206ENST00000525835 TOMM70O94826 608 aa29.02■■■□□ 2.24
SOX6-206ENST00000525835 LTBP1Q14766 1721 aa29.01■■■□□ 2.23
SOX6-206ENST00000525835 LARGE2Q8N3Y3 721 aa29.01■■■□□ 2.23
SOX6-206ENST00000525835 SRCIN1Q9C0H9 1055 aa29.01■■■□□ 2.23
SOX6-206ENST00000525835 VEGFAP15692 232 aaPredicted RBP29■■■□□ 2.23
SOX6-206ENST00000525835 SLC4A10Q6U841 1118 aa29■■■□□ 2.23
SOX6-206ENST00000525835 CCDC85AQ96PX6 553 aaPredicted RBP29■■■□□ 2.23
SOX6-206ENST00000525835 CDC5LQ99459 802 aaKnown RBP29■■■□□ 2.23
SOX6-206ENST00000525835 BCL2L13Q9BXK5 485 aa29■■■□□ 2.23
SOX6-206ENST00000525835 SMC4Q9NTJ3 1288 aa29■■■□□ 2.23
SOX6-206ENST00000525835 GRM8O00222 908 aa28.99■■■□□ 2.23
SOX6-206ENST00000525835 PPIP5K2O43314 1243 aa28.99■■■□□ 2.23
SOX6-206ENST00000525835 DDNO94850 711 aaPredicted RBP28.99■■■□□ 2.23
SOX6-206ENST00000525835 BRPF1P55201 1214 aaPredicted RBP28.99■■■□□ 2.23
SOX6-206ENST00000525835 GREM2Q9H772 168 aa28.99■■■□□ 2.23
SOX6-206ENST00000525835 ZNF541Q9H0D2 1346 aa28.98■■■□□ 2.23
SOX6-206ENST00000525835 CSF1RP07333 972 aa28.98■■■□□ 2.23
SOX6-206ENST00000525835 ANKRD18AQ8IVF6 992 aa28.98■■■□□ 2.23
SOX6-206ENST00000525835 POTECB2RU33 542 aa28.97■■■□□ 2.23
SOX6-206ENST00000525835 KIAA2012Q0VF49 1180 aa28.97■■■□□ 2.23
SOX6-206ENST00000525835 AOC3Q16853 763 aa28.97■■■□□ 2.23
SOX6-206ENST00000525835 C16orf71Q8IYS4 520 aaPredicted RBP28.97■■■□□ 2.23
SOX6-206ENST00000525835 L3MBTL3Q96JM7 780 aaPredicted RBP28.97■■■□□ 2.23
SOX6-206ENST00000525835 PODXL2Q9NZ53 605 aa28.97■■■□□ 2.23
SOX6-206ENST00000525835 NSFL1CQ9UNZ2 370 aaKnown RBP28.97■■■□□ 2.23
SOX6-206ENST00000525835 GPSM2P81274 684 aa28.96■■■□□ 2.23
SOX6-206ENST00000525835 NIM1KQ8IY84 436 aa28.96■■■□□ 2.23
SOX6-206ENST00000525835 RBM46Q8TBY0 533 aaKnown RBP28.96■■■□□ 2.23
SOX6-206ENST00000525835 SCN4AP35499 1836 aa28.95■■■□□ 2.23
SOX6-206ENST00000525835 C9orf78Q9NZ63 289 aaPredicted RBP28.95■■■□□ 2.22
SOX6-206ENST00000525835 RARSP54136 660 aaKnown RBP28.94■■■□□ 2.22
SOX6-206ENST00000525835 EIF6P56537 245 aaKnown RBP28.94■■■□□ 2.22
SOX6-206ENST00000525835 FOXO4P98177 505 aa28.94■■■□□ 2.22
SOX6-206ENST00000525835 GPC2Q8N158 579 aa28.94■■■□□ 2.22
SOX6-206ENST00000525835 UTYO14607 1347 aa28.94■■■□□ 2.22
SOX6-206ENST00000525835 ZBED9Q6R2W3 1325 aa28.94■■■□□ 2.22
SOX6-206ENST00000525835 BSDC1Q9NW68 430 aaPredicted RBP28.93■■■□□ 2.22
SOX6-206ENST00000525835 SPEF2Q9C093 1822 aa28.92■■■□□ 2.22
SOX6-206ENST00000525835 ITGA6P23229 1130 aa28.92■■■□□ 2.22
SOX6-206ENST00000525835 FAM161AQ3B820 660 aa28.92■■■□□ 2.22
SOX6-206ENST00000525835 POLLQ9UGP5 575 aa28.92■■■□□ 2.22
SOX6-206ENST00000525835 ZNRF3Q9ULT6 936 aa28.92■■■□□ 2.22
SOX6-206ENST00000525835 IQCA1LA6NCM1 817 aa28.91■■■□□ 2.22
SOX6-206ENST00000525835 TBC1D16Q8TBP0 767 aa28.91■■■□□ 2.22
SOX6-206ENST00000525835 WASHC4Q2M389 1173 aa28.9■■■□□ 2.22
SOX6-206ENST00000525835 EYA3Q99504 573 aa28.9■■■□□ 2.22
SOX6-206ENST00000525835 C6orf229H3BNL8 230 aa28.89■■■□□ 2.22
SOX6-206ENST00000525835 IGHMBP2P38935 993 aaKnown RBP28.89■■■□□ 2.22
SOX6-206ENST00000525835 ANKIB1Q9P2G1 1089 aa28.89■■■□□ 2.22
SOX6-206ENST00000525835 NOB1Q9ULX3 412 aaKnown RBP28.89■■■□□ 2.22
SOX6-206ENST00000525835 XDHP47989 1333 aa28.89■■■□□ 2.21
SOX6-206ENST00000525835 FSTL1Q12841 308 aa28.88■■■□□ 2.21
SOX6-206ENST00000525835 GGA1Q9UJY5 639 aa28.88■■■□□ 2.21
SOX6-206ENST00000525835 MINPP1Q9UNW1 487 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms