RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
CASP4-205ENST00000525116 TUBGCP6Q96RT7 1819 aa9.7□□□□□ -0.86
CASP4-205ENST00000525116 GRIN3BO60391 1043 aa9.7□□□□□ -0.86
CASP4-205ENST00000525116 F12P00748 615 aaPredicted RBP9.7□□□□□ -0.86
CASP4-205ENST00000525116 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
CASP4-205ENST00000525116 SEMA3FQ13275 785 aa9.7□□□□□ -0.86
CASP4-205ENST00000525116 NSD2O96028 1365 aa9.7□□□□□ -0.86
CASP4-205ENST00000525116 QSER1Q2KHR3 1735 aa9.7□□□□□ -0.86
CASP4-205ENST00000525116 DOT1LQ8TEK3 1739 aa9.7□□□□□ -0.86
CASP4-205ENST00000525116 DXOO77932 396 aaKnown RBP9.69□□□□□ -0.86
CASP4-205ENST00000525116 ADH1BP00325 375 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 NBPF6Q5VWK0 638 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 ARMC2Q8NEN0 867 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 USP47Q96K76 1375 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 NBPF4Q96M43 638 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 NUDT12Q9BQG2 462 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 MAP10Q9P2G4 905 aa9.69□□□□□ -0.86
CASP4-205ENST00000525116 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 MEGF6O75095 1541 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 ZPR1O75312 459 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 PTPN5P54829 565 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 NR1H3Q13133 447 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 RRS1Q15050 365 aaKnown RBP9.68□□□□□ -0.86
CASP4-205ENST00000525116 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
CASP4-205ENST00000525116 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 LY75O60449 1722 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
CASP4-205ENST00000525116 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
CASP4-205ENST00000525116 ZBBXA8MT70 800 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 MMP16P51512 607 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 FAM160A2Q8N612 972 aaPredicted RBP9.67□□□□□ -0.86
CASP4-205ENST00000525116 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 RAPGEF4Q8WZA2 1011 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 MTRQ99707 1265 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 GGNBP2Q9H3C7 697 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 ALG2Q9H553 416 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 IL21Q9HBE4 155 aa9.67□□□□□ -0.86
CASP4-205ENST00000525116 ATP10DQ9P241 1426 aa9.66□□□□□ -0.86
CASP4-205ENST00000525116 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
CASP4-205ENST00000525116 TATP17735 454 aaPredicted RBP9.66□□□□□ -0.86
CASP4-205ENST00000525116 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
CASP4-205ENST00000525116 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
CASP4-205ENST00000525116 ZNF592Q92610 1267 aa9.66□□□□□ -0.86
CASP4-205ENST00000525116 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
CASP4-205ENST00000525116 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
CASP4-205ENST00000525116 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
CASP4-205ENST00000525116 PUS7Q96PZ0 661 aaKnown RBP9.65□□□□□ -0.86
CASP4-205ENST00000525116 PRDM9Q9NQV7 894 aa9.65□□□□□ -0.86
CASP4-205ENST00000525116 CD2APQ9Y5K6 639 aa9.65□□□□□ -0.86
CASP4-205ENST00000525116 TONSLQ96HA7 1378 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 FYB1O15117 783 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 TLL1O43897 1013 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 POTEGQ6S5H5 508 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 TESK2Q96S53 571 aa9.64□□□□□ -0.87
CASP4-205ENST00000525116 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 PTK2Q05397 1052 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 PPP1R12CQ9BZL4 782 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 GPSM3Q9Y4H4 160 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 C5P01031 1676 aa9.63□□□□□ -0.87
CASP4-205ENST00000525116 SMG6Q86US8 1419 aaKnown RBP9.63□□□□□ -0.87
CASP4-205ENST00000525116 PCDH11XQ9BZA7 1347 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 PCDH11YQ9BZA8 1340 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 CYP27B1O15528 508 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 AMIGO3Q86WK7 504 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 PBXIP1Q96AQ6 731 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
CASP4-205ENST00000525116 IGSF1Q8N6C5 1336 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 POTEMA6NI47 508 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
CASP4-205ENST00000525116 RFX1P22670 979 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 PDE4CQ08493 712 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 TJAP1Q5JTD0 557 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 PIGBQ92521 554 aa9.61□□□□□ -0.87
CASP4-205ENST00000525116 SMARCC1Q92922 1105 aaPredicted RBP9.61□□□□□ -0.87
CASP4-205ENST00000525116 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
CASP4-205ENST00000525116 HSPA6P17066 643 aa9.6□□□□□ -0.87
CASP4-205ENST00000525116 INSRP06213 1382 aa9.6□□□□□ -0.87
CASP4-205ENST00000525116 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
CASP4-205ENST00000525116 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
CASP4-205ENST00000525116 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
CASP4-205ENST00000525116 TMF1P82094 1093 aa9.59□□□□□ -0.87
CASP4-205ENST00000525116 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
CASP4-205ENST00000525116 EMILIN1Q9Y6C2 1016 aa9.59□□□□□ -0.87
CASP4-205ENST00000525116 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.88
CASP4-205ENST00000525116 LOC102724428A0A0B4J2F2 783 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 LMOD1P29536 600 aaPredicted RBP9.58□□□□□ -0.88
CASP4-205ENST00000525116 SIK1P57059 783 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 ZNF516Q92618 1163 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 ARHGAP9Q9BRR9 750 aa9.58□□□□□ -0.88
CASP4-205ENST00000525116 UNC93B1Q9H1C4 597 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms