RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 DNAJC25Q9H1X3 360 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 CLIP2Q9UDT6 1046 aa21.53■■□□□ 1.04
PCDHB18P-201ENST00000524813 IGSF3O75054 1194 aa21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 ANKRD1Q15327 319 aa21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 PAXBP1Q9Y5B6 917 aa21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 USHBP1Q8N6Y0 703 aa21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 CACTINQ8WUQ7 758 aaKnown RBP21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 CTNNA3Q9UI47 895 aa21.52■■□□□ 1.04
PCDHB18P-201ENST00000524813 ADCY9O60503 1353 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 NAA30Q147X3 362 aaPredicted RBP21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 ERC1Q8IUD2 1116 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 CCDC112Q8NEF3 446 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 BICD2Q8TD16 824 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 STK3Q13188 491 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 CCDC144BQ3MJ40 725 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 CCDC144CPQ8IYA2 1237 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 PGBD1Q96JS3 809 aa21.51■■□□□ 1.03
PCDHB18P-201ENST00000524813 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
PCDHB18P-201ENST00000524813 HIP1O00291 1037 aa21.5■■□□□ 1.03
PCDHB18P-201ENST00000524813 RPS6KB1P23443 525 aa21.5■■□□□ 1.03
PCDHB18P-201ENST00000524813 TOB2Q14106 344 aaPredicted RBP21.5■■□□□ 1.03
PCDHB18P-201ENST00000524813 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
PCDHB18P-201ENST00000524813 C9orf78Q9NZ63 289 aaPredicted RBP21.5■■□□□ 1.03
PCDHB18P-201ENST00000524813 KCNQ3O43525 872 aa21.49■■□□□ 1.03
PCDHB18P-201ENST00000524813 RNF20Q5VTR2 975 aa21.49■■□□□ 1.03
PCDHB18P-201ENST00000524813 A0A0D9SFI3 127 aa21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 HOXB7P09629 217 aa21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 CGNQ9P2M7 1197 aaKnown RBP21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 CEMIPQ8WUJ3 1361 aa21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 ALDH8A1Q9H2A2 487 aaPredicted RBP21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 LGR6Q9HBX8 967 aa21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 SNRKQ9NRH2 765 aa21.48■■□□□ 1.03
PCDHB18P-201ENST00000524813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.47■■□□□ 1.03
PCDHB18P-201ENST00000524813 CDC25BP30305 580 aa21.47■■□□□ 1.03
PCDHB18P-201ENST00000524813 CEP135Q66GS9 1140 aa21.47■■□□□ 1.03
PCDHB18P-201ENST00000524813 ZNF592Q92610 1267 aa21.47■■□□□ 1.03
PCDHB18P-201ENST00000524813 CCDC8Q9H0W5 538 aaPredicted RBP21.47■■□□□ 1.03
PCDHB18P-201ENST00000524813 SLIT3O75094 1523 aa21.47■■□□□ 1.03
PCDHB18P-201ENST00000524813 KCNH5Q8NCM2 988 aa21.46■■□□□ 1.03
PCDHB18P-201ENST00000524813 EAF2Q96CJ1 260 aaPredicted RBP21.46■■□□□ 1.03
PCDHB18P-201ENST00000524813 FSD1Q9BTV5 496 aa21.46■■□□□ 1.03
PCDHB18P-201ENST00000524813 DDX41Q9UJV9 622 aaKnown RBP21.46■■□□□ 1.03
PCDHB18P-201ENST00000524813 MAP3K2Q9Y2U5 619 aa21.46■■□□□ 1.03
PCDHB18P-201ENST00000524813 GCP02774 474 aa21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 JAK2O60674 1132 aa21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 SASH1O94885 1247 aa21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 LRRC8AQ8IWT6 810 aa21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 BOLA2Q9H3K6 86 aa21.45■■□□□ 1.02
PCDHB18P-201ENST00000524813 GOLGA6L19H0YKK7 550 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 ALDH1L1O75891 902 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 CAVIN2O95810 425 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 RESTQ13127 1097 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 BRINP3Q76B58 766 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 TLR7Q9NYK1 1049 aaKnown RBP21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 ARID5BQ14865 1188 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 IQCB1Q15051 598 aa21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 ZNF771Q7L3S4 317 aaPredicted RBP21.44■■□□□ 1.02
PCDHB18P-201ENST00000524813 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 RGPD2P0DJD1 1756 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 GIGYF1O75420 1035 aaPredicted RBP21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 CWF19L2Q2TBE0 894 aaKnown RBP21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 BRF1Q92994 677 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 PXDNQ92626 1479 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 USP27XA6NNY8 438 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 G3BP1Q13283 466 aaKnown RBP eCLIP21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 SARM1Q6SZW1 724 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 C11orf57Q6ZUT1 292 aaPredicted RBP21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 MED23Q9ULK4 1368 aa21.43■■□□□ 1.02
PCDHB18P-201ENST00000524813 GTF3C6Q969F1 213 aa21.42■■□□□ 1.02
PCDHB18P-201ENST00000524813 HMG20BQ9P0W2 317 aa21.42■■□□□ 1.02
PCDHB18P-201ENST00000524813 DBF4Q9UBU7 674 aaPredicted RBP21.42■■□□□ 1.02
PCDHB18P-201ENST00000524813 BTBD11A6QL63 1104 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 GABPB1Q06547 395 aaPredicted RBP21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 KIF18AQ8NI77 898 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 MORC2Q9Y6X9 1032 aaPredicted RBP21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 PHRF1Q9P1Y6 1649 aaKnown RBP21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 H3BQV1 296 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 RBM6P78332 1123 aaKnown RBP21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 TSGA10IPQ3SY00 556 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 IFFO2Q5TF58 517 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 IP6K1Q92551 441 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 MRFAP1L1Q96HT8 127 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 PODXL2Q9NZ53 605 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 SLAIN2Q9P270 581 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 HDAC5Q9UQL6 1122 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 TNS3Q68CZ2 1445 aa21.41■■□□□ 1.02
PCDHB18P-201ENST00000524813 NEMFO60524 1076 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 SUCLG2Q96I99 432 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 RGPD5Q99666 1765 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 CEBPZQ03701 1054 aaKnown RBP21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 PTPN14Q15678 1187 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 PROSER3Q2NL68 480 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 CFAP45Q9UL16 551 aa21.4■■□□□ 1.02
PCDHB18P-201ENST00000524813 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms