RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 PHAXQ9H814 394 aaKnown RBP25.32■■□□□ 1.64
LTBP3-203ENST00000524798 SCNN1DP51172 638 aa25.31■■□□□ 1.64
LTBP3-203ENST00000524798 GOLGA2Q08379 1002 aa25.31■■□□□ 1.64
LTBP3-203ENST00000524798 RIC3Q7Z5B4 369 aa25.31■■□□□ 1.64
LTBP3-203ENST00000524798 ZNF428Q96B54 188 aa25.31■■□□□ 1.64
LTBP3-203ENST00000524798 ZNRF3Q9ULT6 936 aa25.31■■□□□ 1.64
LTBP3-203ENST00000524798 CLEC11AQ9Y240 323 aa25.31■■□□□ 1.64
LTBP3-203ENST00000524798 DDX60Q8IY21 1712 aaKnown RBP25.31■■□□□ 1.64
LTBP3-203ENST00000524798 LMOD1P29536 600 aaPredicted RBP25.3■■□□□ 1.64
LTBP3-203ENST00000524798 KIAA2012Q0VF49 1180 aa25.3■■□□□ 1.64
LTBP3-203ENST00000524798 NCBP3Q53F19 620 aaKnown RBP25.29■■□□□ 1.64
LTBP3-203ENST00000524798 CCDC30Q5VVM6 783 aa25.29■■□□□ 1.64
LTBP3-203ENST00000524798 LTBP1Q14766 1721 aa25.29■■□□□ 1.64
LTBP3-203ENST00000524798 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
LTBP3-203ENST00000524798 EPS15P42566 896 aa25.28■■□□□ 1.64
LTBP3-203ENST00000524798 CNTROBQ8N137 903 aa25.28■■□□□ 1.64
LTBP3-203ENST00000524798 ZBTB38Q8NAP3 1195 aaPredicted RBP25.28■■□□□ 1.64
LTBP3-203ENST00000524798 TAF1P21675 1872 aa25.28■■□□□ 1.64
LTBP3-203ENST00000524798 CXCL9Q07325 125 aa25.27■■□□□ 1.64
LTBP3-203ENST00000524798 WWC1Q8IX03 1113 aa25.27■■□□□ 1.64
LTBP3-203ENST00000524798 TSPYL6Q8N831 410 aa25.27■■□□□ 1.64
LTBP3-203ENST00000524798 TMEM88BA6NKF7 163 aa25.26■■□□□ 1.63
LTBP3-203ENST00000524798 MAP1SQ66K74 1059 aaPredicted RBP25.26■■□□□ 1.63
LTBP3-203ENST00000524798 CCDC191Q8NCU4 936 aa25.26■■□□□ 1.63
LTBP3-203ENST00000524798 CELF1Q92879 486 aaKnown RBP25.26■■□□□ 1.63
LTBP3-203ENST00000524798 LRRC37AA6NMS7 1700 aa25.26■■□□□ 1.63
LTBP3-203ENST00000524798 HSP90B1P14625 803 aaKnown RBP25.25■■□□□ 1.63
LTBP3-203ENST00000524798 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
LTBP3-203ENST00000524798 USP50Q70EL3 339 aaPredicted RBP25.25■■□□□ 1.63
LTBP3-203ENST00000524798 MYD88Q99836 296 aa25.25■■□□□ 1.63
LTBP3-203ENST00000524798 MKRN1Q9UHC7 482 aaKnown RBP25.25■■□□□ 1.63
LTBP3-203ENST00000524798 CNTNAP1P78357 1384 aa25.24■■□□□ 1.63
LTBP3-203ENST00000524798 DDX58O95786 925 aaKnown RBP25.24■■□□□ 1.63
LTBP3-203ENST00000524798 METTL22Q9BUU2 404 aaPredicted RBP25.24■■□□□ 1.63
LTBP3-203ENST00000524798 GPRC5DQ9NZD1 345 aa25.24■■□□□ 1.63
LTBP3-203ENST00000524798 DUOX1Q9NRD9 1551 aa25.23■■□□□ 1.63
LTBP3-203ENST00000524798 IL16Q14005 1332 aa25.23■■□□□ 1.63
LTBP3-203ENST00000524798 PCCAP05165 728 aaPredicted RBP25.23■■□□□ 1.63
LTBP3-203ENST00000524798 ZNF316A6NFI3 1004 aaPredicted RBP25.22■■□□□ 1.63
LTBP3-203ENST00000524798 HSPA1AP0DMV8 641 aaKnown RBP25.22■■□□□ 1.63
LTBP3-203ENST00000524798 HSPA1BP0DMV9 641 aaKnown RBP25.22■■□□□ 1.63
LTBP3-203ENST00000524798 RPS8P62241 208 aaKnown RBP25.22■■□□□ 1.63
LTBP3-203ENST00000524798 CIAPIN1Q6FI81 312 aa25.22■■□□□ 1.63
LTBP3-203ENST00000524798 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
LTBP3-203ENST00000524798 CDHR2Q9BYE9 1310 aa25.21■■□□□ 1.63
LTBP3-203ENST00000524798 TNIP1Q15025 636 aa25.21■■□□□ 1.63
LTBP3-203ENST00000524798 MRS2Q9HD23 443 aa25.21■■□□□ 1.63
LTBP3-203ENST00000524798 ADARB2Q9NS39 739 aaKnown RBP25.21■■□□□ 1.63
LTBP3-203ENST00000524798 CWC25Q9NXE8 425 aaPredicted RBP25.21■■□□□ 1.63
LTBP3-203ENST00000524798 NSFL1CQ9UNZ2 370 aaKnown RBP25.21■■□□□ 1.63
LTBP3-203ENST00000524798 KSR2Q6VAB6 950 aa25.2■■□□□ 1.62
LTBP3-203ENST00000524798 COL4A1P02462 1669 aa25.2■■□□□ 1.62
LTBP3-203ENST00000524798 YDJCA8MPS7 323 aa25.19■■□□□ 1.62
LTBP3-203ENST00000524798 ANP32CO43423 234 aa25.19■■□□□ 1.62
LTBP3-203ENST00000524798 GMPSP49915 693 aaPredicted RBP25.19■■□□□ 1.62
LTBP3-203ENST00000524798 GPSM2P81274 684 aa25.19■■□□□ 1.62
LTBP3-203ENST00000524798 WASHC4Q2M389 1173 aa25.19■■□□□ 1.62
LTBP3-203ENST00000524798 COL13A1Q5TAT6 717 aaPredicted RBP25.19■■□□□ 1.62
LTBP3-203ENST00000524798 POLLQ9UGP5 575 aa25.19■■□□□ 1.62
LTBP3-203ENST00000524798 MAP3K2Q9Y2U5 619 aa25.19■■□□□ 1.62
LTBP3-203ENST00000524798 PDE8AO60658 829 aa25.18■■□□□ 1.62
LTBP3-203ENST00000524798 RAD17O75943 681 aa25.18■■□□□ 1.62
LTBP3-203ENST00000524798 TWISTNBQ3B726 338 aaPredicted RBP25.18■■□□□ 1.62
LTBP3-203ENST00000524798 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
LTBP3-203ENST00000524798 PCNTO95613 3336 aa25.17■■□□□ 1.62
LTBP3-203ENST00000524798 PI4KAP2A4QPH2 592 aa25.17■■□□□ 1.62
LTBP3-203ENST00000524798 PI4KAP1Q8N8J0 262 aa25.17■■□□□ 1.62
LTBP3-203ENST00000524798 SEC31BQ9NQW1 1179 aa25.17■■□□□ 1.62
LTBP3-203ENST00000524798 RASSF10A6NK89 507 aa25.16■■□□□ 1.62
LTBP3-203ENST00000524798 IGKV5-2P06315 115 aa25.16■■□□□ 1.62
LTBP3-203ENST00000524798 VEGFBP49765 207 aa25.16■■□□□ 1.62
LTBP3-203ENST00000524798 CCDC152Q4G0S7 254 aa25.16■■□□□ 1.62
LTBP3-203ENST00000524798 PODXL2Q9NZ53 605 aa25.16■■□□□ 1.62
LTBP3-203ENST00000524798 PGAP2Q9UHJ9 254 aa25.16■■□□□ 1.62
LTBP3-203ENST00000524798 C6orf229H3BNL8 230 aa25.15■■□□□ 1.62
LTBP3-203ENST00000524798 TBC1D16Q8TBP0 767 aa25.15■■□□□ 1.62
LTBP3-203ENST00000524798 EYA3Q99504 573 aa25.15■■□□□ 1.62
LTBP3-203ENST00000524798 BCL2L13Q9BXK5 485 aa25.15■■□□□ 1.62
LTBP3-203ENST00000524798 WDR63Q8IWG1 891 aa25.14■■□□□ 1.62
LTBP3-203ENST00000524798 JARID2Q92833 1246 aaPredicted RBP25.14■■□□□ 1.62
LTBP3-203ENST00000524798 DEFB115Q30KQ5 88 aa25.13■■□□□ 1.61
LTBP3-203ENST00000524798 ZC3H15Q8WU90 426 aaKnown RBP25.13■■□□□ 1.61
LTBP3-203ENST00000524798 DPF2Q92785 391 aa25.13■■□□□ 1.61
LTBP3-203ENST00000524798 RIMBP2O15034 1052 aa25.12■■□□□ 1.61
LTBP3-203ENST00000524798 SLC4A2P04920 1241 aa25.12■■□□□ 1.61
LTBP3-203ENST00000524798 FMR1Q06787 632 aaKnown RBP eCLIP25.12■■□□□ 1.61
LTBP3-203ENST00000524798 NEXNQ0ZGT2 675 aa25.12■■□□□ 1.61
LTBP3-203ENST00000524798 G2E3Q7L622 706 aa25.12■■□□□ 1.61
LTBP3-203ENST00000524798 DBNDD1Q9H9R9 158 aa25.12■■□□□ 1.61
LTBP3-203ENST00000524798 CNOT7Q9UIV1 285 aaKnown RBP25.12■■□□□ 1.61
LTBP3-203ENST00000524798 HIRAP54198 1017 aaPredicted RBP25.11■■□□□ 1.61
LTBP3-203ENST00000524798 FANCIQ9NVI1 1328 aa25.11■■□□□ 1.61
LTBP3-203ENST00000524798 H7C1D1 291 aa25.1■■□□□ 1.61
LTBP3-203ENST00000524798 TRAF5O00463 557 aa25.1■■□□□ 1.61
LTBP3-203ENST00000524798 PSMD14O00487 310 aa25.1■■□□□ 1.61
LTBP3-203ENST00000524798 CST9Q5W186 159 aa25.1■■□□□ 1.61
LTBP3-203ENST00000524798 NEURL1BA8MQ27 555 aa25.09■■□□□ 1.61
LTBP3-203ENST00000524798 ECE2O60344 883 aa25.09■■□□□ 1.61
LTBP3-203ENST00000524798 CTSWP56202 376 aa25.09■■□□□ 1.61
LTBP3-203ENST00000524798 ZC3H12CQ9C0D7 883 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms