RNA–Protein interactions for RNA: ENST00000524520.5

SOX6-203, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-203ENST00000524520 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
SOX6-203ENST00000524520 USP50Q70EL3 339 aaPredicted RBP18.29■□□□□ 0.52
SOX6-203ENST00000524520 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
SOX6-203ENST00000524520 CNTROBQ8N137 903 aa18.28■□□□□ 0.52
SOX6-203ENST00000524520 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
SOX6-203ENST00000524520 ATP5J2-PTCD1G3V325 749 aa18.27■□□□□ 0.52
SOX6-203ENST00000524520 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.52
SOX6-203ENST00000524520 KIAA2012Q0VF49 1180 aa18.27■□□□□ 0.52
SOX6-203ENST00000524520 AOC3Q16853 763 aa18.27■□□□□ 0.52
SOX6-203ENST00000524520 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.52
SOX6-203ENST00000524520 TAF1P21675 1872 aa18.26■□□□□ 0.51
SOX6-203ENST00000524520 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
SOX6-203ENST00000524520 COL4A5P29400 1685 aa18.26■□□□□ 0.51
SOX6-203ENST00000524520 SCNN1DP51172 638 aa18.26■□□□□ 0.51
SOX6-203ENST00000524520 TNIP1Q15025 636 aa18.26■□□□□ 0.51
SOX6-203ENST00000524520 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
SOX6-203ENST00000524520 CDHR2Q9BYE9 1310 aa18.25■□□□□ 0.51
SOX6-203ENST00000524520 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
SOX6-203ENST00000524520 IRS4O14654 1257 aaPredicted RBP18.25■□□□□ 0.51
SOX6-203ENST00000524520 CXCL9Q07325 125 aa18.25■□□□□ 0.51
SOX6-203ENST00000524520 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
SOX6-203ENST00000524520 EPS15P42566 896 aa18.24■□□□□ 0.51
SOX6-203ENST00000524520 CIAPIN1Q6FI81 312 aa18.24■□□□□ 0.51
SOX6-203ENST00000524520 PHAXQ9H814 394 aaKnown RBP18.24■□□□□ 0.51
SOX6-203ENST00000524520 ADARB2Q9NS39 739 aaKnown RBP18.24■□□□□ 0.51
SOX6-203ENST00000524520 GPRC5DQ9NZD1 345 aa18.24■□□□□ 0.51
SOX6-203ENST00000524520 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
SOX6-203ENST00000524520 CACNA1FO60840 1977 aa18.24■□□□□ 0.51
SOX6-203ENST00000524520 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
SOX6-203ENST00000524520 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
SOX6-203ENST00000524520 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
SOX6-203ENST00000524520 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
SOX6-203ENST00000524520 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
SOX6-203ENST00000524520 IL16Q14005 1332 aa18.23■□□□□ 0.51
SOX6-203ENST00000524520 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
SOX6-203ENST00000524520 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
SOX6-203ENST00000524520 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
SOX6-203ENST00000524520 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
SOX6-203ENST00000524520 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
SOX6-203ENST00000524520 STK31Q9BXU1 1019 aa18.22■□□□□ 0.51
SOX6-203ENST00000524520 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
SOX6-203ENST00000524520 PDE8AO60658 829 aa18.21■□□□□ 0.51
SOX6-203ENST00000524520 DEFB115Q30KQ5 88 aa18.21■□□□□ 0.51
SOX6-203ENST00000524520 ZC3H15Q8WU90 426 aaKnown RBP18.21■□□□□ 0.51
SOX6-203ENST00000524520 CELF1Q92879 486 aaKnown RBP18.21■□□□□ 0.51
SOX6-203ENST00000524520 EYA3Q99504 573 aa18.21■□□□□ 0.51
SOX6-203ENST00000524520 MYD88Q99836 296 aa18.21■□□□□ 0.51
SOX6-203ENST00000524520 CWC25Q9NXE8 425 aaPredicted RBP18.21■□□□□ 0.51
SOX6-203ENST00000524520 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 TRPM7Q96QT4 1865 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 RASSF10A6NK89 507 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 ANP32CO43423 234 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 CCDC152Q4G0S7 254 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
SOX6-203ENST00000524520 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
SOX6-203ENST00000524520 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
SOX6-203ENST00000524520 COL13A1Q5TAT6 717 aaPredicted RBP18.19■□□□□ 0.5
SOX6-203ENST00000524520 SLC51AQ86UW1 340 aa18.19■□□□□ 0.5
SOX6-203ENST00000524520 DPF2Q92785 391 aa18.19■□□□□ 0.5
SOX6-203ENST00000524520 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
SOX6-203ENST00000524520 PGAP2Q9UHJ9 254 aa18.19■□□□□ 0.5
SOX6-203ENST00000524520 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
SOX6-203ENST00000524520 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
SOX6-203ENST00000524520 H7C1D1 291 aa18.18■□□□□ 0.5
SOX6-203ENST00000524520 GMPSP49915 693 aaPredicted RBP18.18■□□□□ 0.5
SOX6-203ENST00000524520 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
SOX6-203ENST00000524520 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
SOX6-203ENST00000524520 RAD17O75943 681 aa18.17■□□□□ 0.5
SOX6-203ENST00000524520 VEGFBP49765 207 aa18.17■□□□□ 0.5
SOX6-203ENST00000524520 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
SOX6-203ENST00000524520 ZC3H12CQ9C0D7 883 aaKnown RBP18.17■□□□□ 0.5
SOX6-203ENST00000524520 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
SOX6-203ENST00000524520 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
SOX6-203ENST00000524520 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 RPS12P25398 132 aaKnown RBP18.16■□□□□ 0.5
SOX6-203ENST00000524520 GPSM2P81274 684 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 WDR63Q8IWG1 891 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 CNOT7Q9UIV1 285 aaKnown RBP18.16■□□□□ 0.5
SOX6-203ENST00000524520 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
SOX6-203ENST00000524520 YDJCA8MPS7 323 aa18.15■□□□□ 0.5
SOX6-203ENST00000524520 ECE1P42892 770 aa18.15■□□□□ 0.5
SOX6-203ENST00000524520 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
SOX6-203ENST00000524520 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
SOX6-203ENST00000524520 ABT1Q9ULW3 272 aaKnown RBP18.15■□□□□ 0.5
SOX6-203ENST00000524520 MYH3P11055 1940 aa18.15■□□□□ 0.5
SOX6-203ENST00000524520 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
SOX6-203ENST00000524520 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
SOX6-203ENST00000524520 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
SOX6-203ENST00000524520 TNS4Q8IZW8 715 aa18.14■□□□□ 0.49
SOX6-203ENST00000524520 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
SOX6-203ENST00000524520 CDC5LQ99459 802 aaKnown RBP18.14■□□□□ 0.49
SOX6-203ENST00000524520 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.49
SOX6-203ENST00000524520 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
SOX6-203ENST00000524520 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
SOX6-203ENST00000524520 PRDM10Q9NQV6 1147 aa18.13■□□□□ 0.49
SOX6-203ENST00000524520 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms