RNA–Protein interactions for RNA: ENST00000524347.2

SGCD-204, Transcript of sarcoglycan delta, humanhuman

TSL 5

Gene SGCD, Length 739 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-204ENST00000524347 MEIS3Q99687 375 aa16.19■□□□□ 0.18
SGCD-204ENST00000524347 NYXQ9GZU5 481 aa16.19■□□□□ 0.18
SGCD-204ENST00000524347 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
SGCD-204ENST00000524347 TAF1P21675 1872 aa16.18■□□□□ 0.18
SGCD-204ENST00000524347 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
SGCD-204ENST00000524347 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
SGCD-204ENST00000524347 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
SGCD-204ENST00000524347 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 B4GALNT3Q6L9W6 998 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 NLRP10Q86W26 655 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 LINS1Q8NG48 757 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 RRAGCQ9HB90 399 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 SNED1Q8TER0 1413 aa16.17■□□□□ 0.18
SGCD-204ENST00000524347 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
SGCD-204ENST00000524347 COL4A1P02462 1669 aa16.16■□□□□ 0.18
SGCD-204ENST00000524347 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
SGCD-204ENST00000524347 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
SGCD-204ENST00000524347 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
SGCD-204ENST00000524347 RIC1Q4ADV7 1423 aa16.16■□□□□ 0.18
SGCD-204ENST00000524347 UTYO14607 1347 aa16.16■□□□□ 0.18
SGCD-204ENST00000524347 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
SGCD-204ENST00000524347 MYH3P11055 1940 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 COL4A5P29400 1685 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
SGCD-204ENST00000524347 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 CCDC93Q567U6 631 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 PPP1R42Q7Z4L9 355 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 RIC3Q7Z5B4 369 aa16.15■□□□□ 0.18
SGCD-204ENST00000524347 ZNF277Q9NRM2 450 aaPredicted RBP16.15■□□□□ 0.18
SGCD-204ENST00000524347 CWF19L2Q2TBE0 894 aaKnown RBP16.14■□□□□ 0.17
SGCD-204ENST00000524347 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
SGCD-204ENST00000524347 MYD88Q99836 296 aa16.14■□□□□ 0.17
SGCD-204ENST00000524347 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
SGCD-204ENST00000524347 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
SGCD-204ENST00000524347 C1orf115Q9H7X2 142 aa16.14■□□□□ 0.17
SGCD-204ENST00000524347 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
SGCD-204ENST00000524347 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
SGCD-204ENST00000524347 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
SGCD-204ENST00000524347 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
SGCD-204ENST00000524347 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
SGCD-204ENST00000524347 WDR90Q96KV7 1748 aa16.12■□□□□ 0.17
SGCD-204ENST00000524347 POTECB2RU33 542 aa16.12■□□□□ 0.17
SGCD-204ENST00000524347 TOMM70O94826 608 aa16.12■□□□□ 0.17
SGCD-204ENST00000524347 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
SGCD-204ENST00000524347 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
SGCD-204ENST00000524347 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
SGCD-204ENST00000524347 DDNO94850 711 aaPredicted RBP16.11■□□□□ 0.17
SGCD-204ENST00000524347 GNAI3P08754 354 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 CASP7P55210 303 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 FKBP4Q02790 459 aaKnown RBP eCLIP16.11■□□□□ 0.17
SGCD-204ENST00000524347 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
SGCD-204ENST00000524347 GCKRQ14397 625 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 SLC10A5Q5PT55 438 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 SIRT2Q8IXJ6 389 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 FAM89AQ96GI7 184 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
SGCD-204ENST00000524347 GRM8O00222 908 aa16.1■□□□□ 0.17
SGCD-204ENST00000524347 PPEF1O14829 653 aaPredicted RBP16.1■□□□□ 0.17
SGCD-204ENST00000524347 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
SGCD-204ENST00000524347 HSPA6P17066 643 aa16.1■□□□□ 0.17
SGCD-204ENST00000524347 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
SGCD-204ENST00000524347 RBM17Q96I25 401 aaKnown RBP16.1■□□□□ 0.17
SGCD-204ENST00000524347 NLRP3Q96P20 1036 aa16.1■□□□□ 0.17
SGCD-204ENST00000524347 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
SGCD-204ENST00000524347 IGHDP01880 384 aa16.09■□□□□ 0.17
SGCD-204ENST00000524347 HTRA3P83110 453 aa16.09■□□□□ 0.17
SGCD-204ENST00000524347 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
SGCD-204ENST00000524347 ANKRD44Q8N8A2 993 aa16.09■□□□□ 0.17
SGCD-204ENST00000524347 JARID2Q92833 1246 aaPredicted RBP16.09■□□□□ 0.17
SGCD-204ENST00000524347 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
SGCD-204ENST00000524347 GNAI2P04899 355 aa16.08■□□□□ 0.16
SGCD-204ENST00000524347 UBTFL1P0CB47 393 aaPredicted RBP16.08■□□□□ 0.16
SGCD-204ENST00000524347 CENPQQ7L2Z9 268 aaPredicted RBP16.08■□□□□ 0.16
SGCD-204ENST00000524347 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
SGCD-204ENST00000524347 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
SGCD-204ENST00000524347 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
SGCD-204ENST00000524347 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
SGCD-204ENST00000524347 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
SGCD-204ENST00000524347 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
SGCD-204ENST00000524347 IARSP41252 1262 aaKnown RBP16.07■□□□□ 0.16
SGCD-204ENST00000524347 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
SGCD-204ENST00000524347 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
SGCD-204ENST00000524347 CWC25Q9NXE8 425 aaPredicted RBP16.07■□□□□ 0.16
SGCD-204ENST00000524347 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
SGCD-204ENST00000524347 MTX1Q13505 466 aa16.06■□□□□ 0.16
SGCD-204ENST00000524347 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
SGCD-204ENST00000524347 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
SGCD-204ENST00000524347 DPY19L2Q6NUT2 758 aa16.05■□□□□ 0.16
SGCD-204ENST00000524347 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
SGCD-204ENST00000524347 PSMD1Q99460 953 aa16.05■□□□□ 0.16
SGCD-204ENST00000524347 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
SGCD-204ENST00000524347 A0A1B0GUL6 1792 aa16.05■□□□□ 0.16
SGCD-204ENST00000524347 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms