RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 HAUS7Q99871 368 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 PDRG1Q9NUG6 133 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 TMEM63CQ9P1W3 806 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 RGL2O15211 777 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 F13A1P00488 732 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 PTPN12Q05209 780 aaKnown RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 TRIM28Q13263 835 aaKnown RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 CWC27Q6UX04 472 aaKnown RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 NFATC2IPQ8NCF5 419 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 SLC27A2O14975 620 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 ZNF500O60304 480 aaPredicted RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 ANXA1P04083 346 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 PTH1RQ03431 593 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 TNNI3KQ59H18 835 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 CCDC183Q5T5S1 534 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 VSIG10Q8N0Z9 540 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 CCDC191Q8NCU4 936 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 PLA2G12BQ9BX93 195 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 NLRP2Q9NX02 1062 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 NOL7Q9UMY1 257 aaKnown RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 SMC3Q9UQE7 1217 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 RBM8AQ9Y5S9 174 aaKnown RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 U3KPZ7 1027 aaPredicted RBP6.53□□□□□ -1.36
CLINT1-208ENST00000524306 FPGT-TNNI3KV9GXZ4 949 aa6.53□□□□□ -1.36
CLINT1-208ENST00000524306 BCORQ6W2J9 1755 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 PRAMEF22A3QJZ6 481 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 HMGB1P09429 215 aaKnown RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 CASTP20810 708 aaKnown RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 SYT1P21579 422 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 PRIM1P49642 420 aaKnown RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 DOT1LQ8TEK3 1739 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 UPF3BQ9BZI7 483 aaKnown RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 HELLSQ9NRZ9 838 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 NHSQ6T4R5 1651 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 TAF5LO75529 589 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 RPS6KB1P23443 525 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 CABP4P57796 275 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 NMIQ13287 307 aaPredicted RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 LLPHQ9BRT6 129 aaKnown RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 TEX13AQ9BXU3 409 aaPredicted RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 PA2G4Q9UQ80 394 aaKnown RBP6.52□□□□□ -1.37
CLINT1-208ENST00000524306 MTMR6Q9Y217 621 aa6.52□□□□□ -1.37
CLINT1-208ENST00000524306 FOXO4P98177 505 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 USP48Q86UV5 1035 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 RBM33Q96EV2 1170 aaKnown RBP6.51□□□□□ -1.37
CLINT1-208ENST00000524306 JAKMIP1Q96N16 626 aaKnown RBP6.51□□□□□ -1.37
CLINT1-208ENST00000524306 MYD88Q99836 296 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 DSCC1Q9BVC3 393 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 AGXT2Q9BYV1 514 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 IL15P40933 162 aaPredicted RBP6.51□□□□□ -1.37
CLINT1-208ENST00000524306 ZC3H6P61129 1189 aaKnown RBP6.51□□□□□ -1.37
CLINT1-208ENST00000524306 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
CLINT1-208ENST00000524306 EPHA10Q5JZY3 1008 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 PRPF40BQ6NWY9 871 aaKnown RBP6.51□□□□□ -1.37
CLINT1-208ENST00000524306 CCDC39Q9UFE4 941 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 USP16Q9Y5T5 823 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 ZNF609O15014 1411 aa6.51□□□□□ -1.37
CLINT1-208ENST00000524306 ST3GAL1Q11201 340 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 ATL3Q6DD88 541 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 BLOC1S2Q6QNY1 142 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 KBTBD3Q8NAB2 608 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 ZCRB1Q8TBF4 217 aaKnown RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 FUCA2Q9BTY2 467 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 RTN4Q9NQC3 1192 aaKnown RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 DBNLQ9UJU6 430 aaKnown RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 RGPD3A6NKT7 1758 aaPredicted RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 RGPD4Q7Z3J3 1758 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 A0A0D9SFI3 127 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 SLC39A6Q13433 755 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 LRRFIP1Q32MZ4 808 aaKnown RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 ADCK5Q3MIX3 580 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 MCMDC2Q4G0Z9 681 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 FSD1Q9BTV5 496 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 ISCA1Q9BUE6 129 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 CWC25Q9NXE8 425 aaPredicted RBP6.5□□□□□ -1.37
CLINT1-208ENST00000524306 WDR19Q8NEZ3 1342 aa6.5□□□□□ -1.37
CLINT1-208ENST00000524306 ZBTB7CA1YPR0 619 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 OFD1O75665 1012 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 TPM2P07951 284 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 GJB2P29033 226 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 EVCP57679 992 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ME3Q16798 604 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ZNF512BQ96KM6 892 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 CDHR2Q9BYE9 1310 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 LY75O60449 1722 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 LRP5O75197 1615 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 A0A087WZG4 1122 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 NBPF26B4DH59 902 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 CSB-PGBD3P0DP91 1061 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 TOB2Q14106 344 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 NBPF14Q5TI25 921 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 NBPF10Q6P3W6 841 aaKnown RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 LMOD2Q6P5Q4 547 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 RBM43Q6ZSC3 357 aaKnown RBP6.49□□□□□ -1.37
CLINT1-208ENST00000524306 ATG9AQ7Z3C6 839 aa6.49□□□□□ -1.37
CLINT1-208ENST00000524306 NBPF15Q8N660 670 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms