RNA–Protein interactions for RNA: ENST00000524257.5

PTK2-256, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-256	ENST00000524257	HSP90B1	P14625	803 aa	Known RBP	13.62	□□□□□ -0.23
PTK2-256	ENST00000524257	DIEXF	Q68CQ4	756 aa	Known RBP	13.62	□□□□□ -0.23
PTK2-256	ENST00000524257		E9PSI1	815 aa		13.61	□□□□□ -0.23
PTK2-256	ENST00000524257	PDE8A	O60658	829 aa		13.61	□□□□□ -0.23
PTK2-256	ENST00000524257	CWF19L2	Q2TBE0	894 aa	Known RBP	13.61	□□□□□ -0.23
PTK2-256	ENST00000524257	SP8	Q8IXZ3	490 aa		13.61	□□□□□ -0.23
PTK2-256	ENST00000524257	MYH3	P11055	1940 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	COL4A1	P02462	1669 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	LRRC37A	A6NMS7	1700 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	NEURL1B	A8MQ27	555 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	DDN	O94850	711 aa	Predicted RBP	13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	VEGFA	P15692	232 aa	Predicted RBP	13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	TMC4	Q7Z404	712 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	RBM46	Q8TBY0	533 aa	Known RBP	13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	DNAAF4	Q8WXU2	420 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	JDP2	Q8WYK2	163 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	CELF1	Q92879	486 aa	Known RBP	13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	CDHR2	Q9BYE9	1310 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	ZNF541	Q9H0D2	1346 aa		13.6	□□□□□ -0.23
PTK2-256	ENST00000524257	COL4A5	P29400	1685 aa		13.59	□□□□□ -0.23
PTK2-256	ENST00000524257	SLFN5	Q08AF3	891 aa		13.59	□□□□□ -0.23
PTK2-256	ENST00000524257	CCDC152	Q4G0S7	254 aa		13.59	□□□□□ -0.23
PTK2-256	ENST00000524257	DPP8	Q6V1X1	898 aa	Predicted RBP	13.59	□□□□□ -0.23
PTK2-256	ENST00000524257	LARGE2	Q8N3Y3	721 aa		13.59	□□□□□ -0.23
PTK2-256	ENST00000524257	MPND	Q8N594	471 aa		13.59	□□□□□ -0.23
PTK2-256	ENST00000524257	POTEC	B2RU33	542 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257		F6X3S4	739 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	FZD9	O00144	591 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	PPIP5K2	O43314	1243 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	MIER1	Q8N108	512 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	SUPT20H	Q8NEM7	779 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	SEC31B	Q9NQW1	1179 aa		13.58	□□□□□ -0.24
PTK2-256	ENST00000524257	HSPA6	P17066	643 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	RPS8	P62241	208 aa	Known RBP	13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	GCKR	Q14397	625 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	AOC3	Q16853	763 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	UBE3B	Q7Z3V4	1068 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	LINS1	Q8NG48	757 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	CDCA7L	Q96GN5	454 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	DUOX1	Q9NRD9	1551 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257	SCN4A	P35499	1836 aa		13.57	□□□□□ -0.24
PTK2-256	ENST00000524257		H7C1W4	665 aa		13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	CTSW	P56202	376 aa		13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	EIF6	P56537	245 aa	Known RBP	13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	FSTL1	Q12841	308 aa		13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	NIM1K	Q8IY84	436 aa		13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	VPS33B	Q9H267	617 aa		13.56	□□□□□ -0.24
PTK2-256	ENST00000524257	SPEF2	Q9C093	1822 aa		13.55	□□□□□ -0.24
PTK2-256	ENST00000524257	SMC1B	Q8NDV3	1235 aa		13.55	□□□□□ -0.24
PTK2-256	ENST00000524257	TTLL11	Q8NHH1	800 aa		13.55	□□□□□ -0.24
PTK2-256	ENST00000524257	LTBP1	Q14766	1721 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	IQCA1L	A6NCM1	817 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	CASP7	P55210	303 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	GPSM2	P81274	684 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	KIAA2012	Q0VF49	1180 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	BEND3	Q5T5X7	828 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	ANKRD18A	Q8IVF6	992 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	TRMT2A	Q8IZ69	625 aa	Known RBP	13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	GPC2	Q8N158	579 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	MRPL50	Q8N5N7	158 aa	Known RBP	13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	GJA3	Q9Y6H8	435 aa		13.54	□□□□□ -0.24
PTK2-256	ENST00000524257	SLC4A10	Q6U841	1118 aa		13.53	□□□□□ -0.24
PTK2-256	ENST00000524257	CDC5L	Q99459	802 aa	Known RBP	13.53	□□□□□ -0.24
PTK2-256	ENST00000524257	PLA2G12B	Q9BX93	195 aa		13.53	□□□□□ -0.24
PTK2-256	ENST00000524257	GREM2	Q9H772	168 aa		13.53	□□□□□ -0.24
PTK2-256	ENST00000524257	C6orf229	H3BNL8	230 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	POTEI	P0CG38	1075 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	POTEJ	P0CG39	1038 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	WASHC4	Q2M389	1173 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	SSH1	Q8WYL5	1049 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	BCL2L13	Q9BXK5	485 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	POLL	Q9UGP5	575 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	HACL1	Q9UJ83	578 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	ZNRF3	Q9ULT6	936 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	RTL9	Q8NET4	1388 aa		13.52	□□□□□ -0.25
PTK2-256	ENST00000524257	APLP1	P51693	650 aa		13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	TBC1D16	Q8TBP0	767 aa		13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	GPR101	Q96P66	508 aa	Predicted RBP	13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	EYA3	Q99504	573 aa		13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	SRCIN1	Q9C0H9	1055 aa		13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	PODXL2	Q9NZ53	605 aa		13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	ANKIB1	Q9P2G1	1089 aa		13.51	□□□□□ -0.25
PTK2-256	ENST00000524257	PTPRC	P08575	1304 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	RIMBP2	O15034	1052 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	ALDH1L1	O75891	902 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	UFL1	O94874	794 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	CSF1R	P07333	972 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	LMOD1	P29536	600 aa	Predicted RBP	13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	EPHX2	P34913	555 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	CXCL9	Q07325	125 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	FAM161A	Q3B820	660 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	ALDH1L2	Q3SY69	923 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	EAPP	Q56P03	285 aa	Predicted RBP	13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	GGA1	Q9UJY5	639 aa		13.5	□□□□□ -0.25
PTK2-256	ENST00000524257	XDH	P47989	1333 aa		13.49	□□□□□ -0.25

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