RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PDE8AO60658 829 aa26.64■■□□□ 1.86
TRAPPC9-215ENST00000524162 GLTPD2A6NH11 291 aa26.63■■□□□ 1.85
TRAPPC9-215ENST00000524162 H7C1W4 665 aa26.62■■□□□ 1.85
TRAPPC9-215ENST00000524162 GCKRQ14397 625 aa26.62■■□□□ 1.85
TRAPPC9-215ENST00000524162 ALDH1L2Q3SY69 923 aa26.62■■□□□ 1.85
TRAPPC9-215ENST00000524162 OLFM4Q6UX06 510 aa26.62■■□□□ 1.85
TRAPPC9-215ENST00000524162 CDCA7LQ96GN5 454 aa26.62■■□□□ 1.85
TRAPPC9-215ENST00000524162 DPY19L2Q6NUT2 758 aa26.61■■□□□ 1.85
TRAPPC9-215ENST00000524162 RTFDC1Q9BY42 306 aaPredicted RBP26.61■■□□□ 1.85
TRAPPC9-215ENST00000524162 WDR90Q96KV7 1748 aa26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 KIF3CO14782 793 aa26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 IARSP41252 1262 aaKnown RBP26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 CWF19L2Q2TBE0 894 aaKnown RBP26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 CCDC152Q4G0S7 254 aa26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 RTL5Q5HYW3 569 aaPredicted RBP26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 ZNF526Q8TF50 670 aaPredicted RBP26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 PLA2G12BQ9BX93 195 aa26.6■■□□□ 1.85
TRAPPC9-215ENST00000524162 RTL9Q8NET4 1388 aa26.59■■□□□ 1.85
TRAPPC9-215ENST00000524162 C1QTNF8P60827 252 aa26.59■■□□□ 1.85
TRAPPC9-215ENST00000524162 PTPRCP08575 1304 aa26.59■■□□□ 1.85
TRAPPC9-215ENST00000524162 BEND3Q5T5X7 828 aa26.58■■□□□ 1.85
TRAPPC9-215ENST00000524162 MRPL50Q8N5N7 158 aaKnown RBP26.58■■□□□ 1.85
TRAPPC9-215ENST00000524162 SUPT20HQ8NEM7 779 aa26.58■■□□□ 1.85
TRAPPC9-215ENST00000524162 RPS8P62241 208 aaKnown RBP26.57■■□□□ 1.84
TRAPPC9-215ENST00000524162 ZNF277Q9NRM2 450 aaPredicted RBP26.57■■□□□ 1.84
TRAPPC9-215ENST00000524162 BRPF1P55201 1214 aaPredicted RBP26.56■■□□□ 1.84
TRAPPC9-215ENST00000524162 CASP7P55210 303 aa26.56■■□□□ 1.84
TRAPPC9-215ENST00000524162 FZD9O00144 591 aa26.55■■□□□ 1.84
TRAPPC9-215ENST00000524162 ALDH1L1O75891 902 aa26.55■■□□□ 1.84
TRAPPC9-215ENST00000524162 CTSWP56202 376 aa26.55■■□□□ 1.84
TRAPPC9-215ENST00000524162 SSH1Q8WYL5 1049 aa26.55■■□□□ 1.84
TRAPPC9-215ENST00000524162 CELF1Q92879 486 aaKnown RBP26.55■■□□□ 1.84
TRAPPC9-215ENST00000524162 NMRK2Q9NPI5 230 aa26.55■■□□□ 1.84
TRAPPC9-215ENST00000524162 LTBP1Q14766 1721 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 SCN4AP35499 1836 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 TOMM70O94826 608 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 UBE3BQ7Z3V4 1068 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 MPNDQ8N594 471 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 TTLL11Q8NHH1 800 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 JDP2Q8WYK2 163 aa26.54■■□□□ 1.84
TRAPPC9-215ENST00000524162 F6X3S4 739 aa26.53■■□□□ 1.84
TRAPPC9-215ENST00000524162 DPP8Q6V1X1 898 aaPredicted RBP26.53■■□□□ 1.84
TRAPPC9-215ENST00000524162 VEGFAP15692 232 aaPredicted RBP26.52■■□□□ 1.84
TRAPPC9-215ENST00000524162 L3MBTL3Q96JM7 780 aaPredicted RBP26.51■■□□□ 1.83
TRAPPC9-215ENST00000524162 CDC5LQ99459 802 aaKnown RBP26.51■■□□□ 1.83
TRAPPC9-215ENST00000524162 DUOX1Q9NRD9 1551 aa26.5■■□□□ 1.83
TRAPPC9-215ENST00000524162 CSF1RP07333 972 aa26.5■■□□□ 1.83
TRAPPC9-215ENST00000524162 JARID2Q92833 1246 aaPredicted RBP26.5■■□□□ 1.83
TRAPPC9-215ENST00000524162 SRCIN1Q9C0H9 1055 aa26.5■■□□□ 1.83
TRAPPC9-215ENST00000524162 PODXL2Q9NZ53 605 aa26.5■■□□□ 1.83
TRAPPC9-215ENST00000524162 COL4A1P02462 1669 aa26.5■■□□□ 1.83
TRAPPC9-215ENST00000524162 GRM8O00222 908 aa26.49■■□□□ 1.83
TRAPPC9-215ENST00000524162 LARGE2Q8N3Y3 721 aa26.49■■□□□ 1.83
TRAPPC9-215ENST00000524162 RBM46Q8TBY0 533 aaKnown RBP26.49■■□□□ 1.83
TRAPPC9-215ENST00000524162 RRAGCQ9HB90 399 aa26.49■■□□□ 1.83
TRAPPC9-215ENST00000524162 SEC31BQ9NQW1 1179 aa26.49■■□□□ 1.83
TRAPPC9-215ENST00000524162 COL4A5P29400 1685 aa26.48■■□□□ 1.83
TRAPPC9-215ENST00000524162 KIAA2012Q0VF49 1180 aa26.48■■□□□ 1.83
TRAPPC9-215ENST00000524162 UTYO14607 1347 aa26.47■■□□□ 1.83
TRAPPC9-215ENST00000524162 HNRNPUQ00839 825 aaKnown RBP eCLIP26.47■■□□□ 1.83
TRAPPC9-215ENST00000524162 ANKRD18AQ8IVF6 992 aa26.47■■□□□ 1.83
TRAPPC9-215ENST00000524162 GPC2Q8N158 579 aa26.47■■□□□ 1.83
TRAPPC9-215ENST00000524162 POTECB2RU33 542 aa26.46■■□□□ 1.83
TRAPPC9-215ENST00000524162 PPIP5K2O43314 1243 aa26.46■■□□□ 1.83
TRAPPC9-215ENST00000524162 SLC51AQ86UW1 340 aa26.46■■□□□ 1.83
TRAPPC9-215ENST00000524162 C16orf71Q8IYS4 520 aaPredicted RBP26.46■■□□□ 1.83
TRAPPC9-215ENST00000524162 SMC4Q9NTJ3 1288 aa26.46■■□□□ 1.83
TRAPPC9-215ENST00000524162 BSDC1Q9NW68 430 aaPredicted RBP26.46■■□□□ 1.83
TRAPPC9-215ENST00000524162 IQCA1LA6NCM1 817 aa26.45■■□□□ 1.82
TRAPPC9-215ENST00000524162 NIM1KQ8IY84 436 aa26.45■■□□□ 1.82
TRAPPC9-215ENST00000524162 GREM2Q9H772 168 aa26.45■■□□□ 1.82
TRAPPC9-215ENST00000524162 NSFL1CQ9UNZ2 370 aaKnown RBP26.45■■□□□ 1.82
TRAPPC9-215ENST00000524162 ZBED9Q6R2W3 1325 aa26.44■■□□□ 1.82
TRAPPC9-215ENST00000524162 DDNO94850 711 aaPredicted RBP26.44■■□□□ 1.82
TRAPPC9-215ENST00000524162 EIF6P56537 245 aaKnown RBP26.44■■□□□ 1.82
TRAPPC9-215ENST00000524162 FSTL1Q12841 308 aa26.44■■□□□ 1.82
TRAPPC9-215ENST00000524162 SLC4A10Q6U841 1118 aa26.44■■□□□ 1.82
TRAPPC9-215ENST00000524162 ZNF541Q9H0D2 1346 aa26.43■■□□□ 1.82
TRAPPC9-215ENST00000524162 RARSP54136 660 aaKnown RBP26.43■■□□□ 1.82
TRAPPC9-215ENST00000524162 AOC3Q16853 763 aa26.43■■□□□ 1.82
TRAPPC9-215ENST00000524162 EYA3Q99504 573 aa26.43■■□□□ 1.82
TRAPPC9-215ENST00000524162 C9orf78Q9NZ63 289 aaPredicted RBP26.43■■□□□ 1.82
TRAPPC9-215ENST00000524162 ZNRF3Q9ULT6 936 aa26.43■■□□□ 1.82
TRAPPC9-215ENST00000524162 SPEF2Q9C093 1822 aa26.42■■□□□ 1.82
TRAPPC9-215ENST00000524162 GPSM2P81274 684 aa26.42■■□□□ 1.82
TRAPPC9-215ENST00000524162 FOXO4P98177 505 aa26.42■■□□□ 1.82
TRAPPC9-215ENST00000524162 ARHGAP45Q92619 1136 aa26.42■■□□□ 1.82
TRAPPC9-215ENST00000524162 XDHP47989 1333 aa26.41■■□□□ 1.82
TRAPPC9-215ENST00000524162 KIF16BQ96L93 1317 aa26.41■■□□□ 1.82
TRAPPC9-215ENST00000524162 POLLQ9UGP5 575 aa26.41■■□□□ 1.82
TRAPPC9-215ENST00000524162 ITGA6P23229 1130 aa26.4■■□□□ 1.82
TRAPPC9-215ENST00000524162 WASHC4Q2M389 1173 aa26.4■■□□□ 1.82
TRAPPC9-215ENST00000524162 TBC1D16Q8TBP0 767 aa26.4■■□□□ 1.82
TRAPPC9-215ENST00000524162 CCDC85AQ96PX6 553 aaPredicted RBP26.4■■□□□ 1.82
TRAPPC9-215ENST00000524162 BCL2L13Q9BXK5 485 aa26.4■■□□□ 1.82
TRAPPC9-215ENST00000524162 IGHMBP2P38935 993 aaKnown RBP26.39■■□□□ 1.82
TRAPPC9-215ENST00000524162 API5Q9BZZ5 524 aaKnown RBP26.39■■□□□ 1.82
TRAPPC9-215ENST00000524162 CEP350Q5VT06 3117 aa26.39■■□□□ 1.82
TRAPPC9-215ENST00000524162 FAM161AQ3B820 660 aa26.38■■□□□ 1.81
TRAPPC9-215ENST00000524162 SMC1BQ8NDV3 1235 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms