RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
VEGFA-224ENST00000523873 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
VEGFA-224ENST00000523873 SEC31BQ9NQW1 1179 aa16.23■□□□□ 0.19
VEGFA-224ENST00000523873 C9orf78Q9NZ63 289 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-224ENST00000523873 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-224ENST00000523873 ALDH1B1P30837 517 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 CTSWP56202 376 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 RASSF7Q02833 373 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 ZKSCAN2Q63HK3 967 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
VEGFA-224ENST00000523873 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 CELF1Q92879 486 aaKnown RBP16.22■□□□□ 0.19
VEGFA-224ENST00000523873 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
VEGFA-224ENST00000523873 A0A1B0GUL6 1792 aa16.21■□□□□ 0.19
VEGFA-224ENST00000523873 PPEF1O14829 653 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-224ENST00000523873 IPO8O15397 1037 aaKnown RBP16.21■□□□□ 0.19
VEGFA-224ENST00000523873 C7orf43Q8WVR3 580 aa16.21■□□□□ 0.19
VEGFA-224ENST00000523873 SUCLG2Q96I99 432 aa16.21■□□□□ 0.19
VEGFA-224ENST00000523873 TIAM2Q8IVF5 1701 aa16.21■□□□□ 0.19
VEGFA-224ENST00000523873 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
VEGFA-224ENST00000523873 GRAPQ13588 217 aa16.2■□□□□ 0.18
VEGFA-224ENST00000523873 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
VEGFA-224ENST00000523873 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-224ENST00000523873 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
VEGFA-224ENST00000523873 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
VEGFA-224ENST00000523873 GREM2Q9H772 168 aa16.2■□□□□ 0.18
VEGFA-224ENST00000523873 NFKBIEO00221 500 aa16.19■□□□□ 0.18
VEGFA-224ENST00000523873 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
VEGFA-224ENST00000523873 PRELPP51888 382 aa16.19■□□□□ 0.18
VEGFA-224ENST00000523873 FOXO4P98177 505 aa16.19■□□□□ 0.18
VEGFA-224ENST00000523873 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
VEGFA-224ENST00000523873 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
VEGFA-224ENST00000523873 UTYO14607 1347 aa16.19■□□□□ 0.18
VEGFA-224ENST00000523873 PLIN1O60240 522 aa16.18■□□□□ 0.18
VEGFA-224ENST00000523873 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
VEGFA-224ENST00000523873 KAZALD1Q96I82 304 aa16.18■□□□□ 0.18
VEGFA-224ENST00000523873 CHMP3Q9Y3E7 222 aa16.18■□□□□ 0.18
VEGFA-224ENST00000523873 SNED1Q8TER0 1413 aa16.18■□□□□ 0.18
VEGFA-224ENST00000523873 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
VEGFA-224ENST00000523873 RLBP1P12271 317 aa16.17■□□□□ 0.18
VEGFA-224ENST00000523873 CCDC93Q567U6 631 aa16.17■□□□□ 0.18
VEGFA-224ENST00000523873 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
VEGFA-224ENST00000523873 GOLGB1Q14789 3259 aaKnown RBP16.16■□□□□ 0.18
VEGFA-224ENST00000523873 CSF1RP07333 972 aa16.16■□□□□ 0.18
VEGFA-224ENST00000523873 LMBR1LQ6UX01 489 aa16.16■□□□□ 0.18
VEGFA-224ENST00000523873 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
VEGFA-224ENST00000523873 MEIS3Q99687 375 aa16.16■□□□□ 0.18
VEGFA-224ENST00000523873 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
VEGFA-224ENST00000523873 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
VEGFA-224ENST00000523873 BBOX1O75936 387 aa16.15■□□□□ 0.18
VEGFA-224ENST00000523873 ITGA6P23229 1130 aa16.15■□□□□ 0.18
VEGFA-224ENST00000523873 RPS8P62241 208 aaKnown RBP16.15■□□□□ 0.18
VEGFA-224ENST00000523873 DZIP1LQ8IYY4 767 aaKnown RBP16.15■□□□□ 0.18
VEGFA-224ENST00000523873 TAOK3Q9H2K8 898 aa16.15■□□□□ 0.18
VEGFA-224ENST00000523873 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
VEGFA-224ENST00000523873 RTL9Q8NET4 1388 aa16.14■□□□□ 0.17
VEGFA-224ENST00000523873 SOGA3Q5TF21 947 aa16.14■□□□□ 0.17
VEGFA-224ENST00000523873 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
VEGFA-224ENST00000523873 ANKRD18AQ8IVF6 992 aa16.14■□□□□ 0.17
VEGFA-224ENST00000523873 SP8Q8IXZ3 490 aa16.14■□□□□ 0.17
VEGFA-224ENST00000523873 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
VEGFA-224ENST00000523873 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
VEGFA-224ENST00000523873 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
VEGFA-224ENST00000523873 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
VEGFA-224ENST00000523873 ZNF277Q9NRM2 450 aaPredicted RBP16.13■□□□□ 0.17
VEGFA-224ENST00000523873 RNF181Q9P0P0 153 aa16.13■□□□□ 0.17
VEGFA-224ENST00000523873 COL4A5P29400 1685 aa16.12■□□□□ 0.17
VEGFA-224ENST00000523873 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
VEGFA-224ENST00000523873 YY1P25490 414 aa16.12■□□□□ 0.17
VEGFA-224ENST00000523873 GPSM2P81274 684 aa16.12■□□□□ 0.17
VEGFA-224ENST00000523873 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
VEGFA-224ENST00000523873 ITPRIPQ8IWB1 547 aa16.12■□□□□ 0.17
VEGFA-224ENST00000523873 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
VEGFA-224ENST00000523873 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
VEGFA-224ENST00000523873 LRRFIP2Q9Y608 721 aaKnown RBP16.12■□□□□ 0.17
VEGFA-224ENST00000523873 UTRNP46939 3433 aa16.11■□□□□ 0.17
VEGFA-224ENST00000523873 LMNB1P20700 586 aa16.11■□□□□ 0.17
VEGFA-224ENST00000523873 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
VEGFA-224ENST00000523873 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
VEGFA-224ENST00000523873 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
VEGFA-224ENST00000523873 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
VEGFA-224ENST00000523873 MPNDQ8N594 471 aa16.11■□□□□ 0.17
VEGFA-224ENST00000523873 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
VEGFA-224ENST00000523873 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
VEGFA-224ENST00000523873 LTBP3Q9NS15 1303 aa16.11■□□□□ 0.17
VEGFA-224ENST00000523873 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
VEGFA-224ENST00000523873 DPP8Q6V1X1 898 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-224ENST00000523873 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
VEGFA-224ENST00000523873 NSFL1CQ9UNZ2 370 aaKnown RBP16.1■□□□□ 0.17
VEGFA-224ENST00000523873 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
VEGFA-224ENST00000523873 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
VEGFA-224ENST00000523873 PSMD1Q99460 953 aa16.09■□□□□ 0.17
VEGFA-224ENST00000523873 C1orf115Q9H7X2 142 aa16.09■□□□□ 0.17
VEGFA-224ENST00000523873 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
VEGFA-224ENST00000523873 GNAI3P08754 354 aa16.08■□□□□ 0.16
VEGFA-224ENST00000523873 IARSP41252 1262 aaKnown RBP16.08■□□□□ 0.16
VEGFA-224ENST00000523873 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
VEGFA-224ENST00000523873 MPHOSPH8Q99549 860 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms