RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 NLRP13Q86W25 1043 aa10.62□□□□□ -0.71
CPNE3-206ENST00000523469 ACDQ96AP0 544 aa10.62□□□□□ -0.71
CPNE3-206ENST00000523469 GGNBP2Q9H3C7 697 aa10.62□□□□□ -0.71
CPNE3-206ENST00000523469 RARAP10276 462 aa10.61□□□□□ -0.71
CPNE3-206ENST00000523469 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
CPNE3-206ENST00000523469 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
CPNE3-206ENST00000523469 GGA1Q9UJY5 639 aa10.61□□□□□ -0.71
CPNE3-206ENST00000523469 NEURL1BA8MQ27 555 aa10.6□□□□□ -0.71
CPNE3-206ENST00000523469 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
CPNE3-206ENST00000523469 SLCO4C1Q6ZQN7 724 aa10.6□□□□□ -0.71
CPNE3-206ENST00000523469 ZNF438Q7Z4V0 828 aa10.6□□□□□ -0.71
CPNE3-206ENST00000523469 RBCK1Q9BYM8 510 aa10.6□□□□□ -0.71
CPNE3-206ENST00000523469 ZFATQ9P243 1243 aa10.6□□□□□ -0.71
CPNE3-206ENST00000523469 MAPK1P28482 360 aa10.59□□□□□ -0.71
CPNE3-206ENST00000523469 TNFRSF25Q93038 417 aa10.59□□□□□ -0.71
CPNE3-206ENST00000523469 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
CPNE3-206ENST00000523469 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
CPNE3-206ENST00000523469 MARSP56192 900 aaKnown RBP10.58□□□□□ -0.72
CPNE3-206ENST00000523469 FAM129BQ96TA1 746 aa10.58□□□□□ -0.72
CPNE3-206ENST00000523469 A6NHS1 94 aa10.57□□□□□ -0.72
CPNE3-206ENST00000523469 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
CPNE3-206ENST00000523469 BCRP11274 1271 aa10.57□□□□□ -0.72
CPNE3-206ENST00000523469 TTC39BQ5VTQ0 682 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-206ENST00000523469 DHX32Q7L7V1 743 aaKnown RBP10.57□□□□□ -0.72
CPNE3-206ENST00000523469 FCHSD1Q86WN1 690 aa10.57□□□□□ -0.72
CPNE3-206ENST00000523469 TMC1Q8TDI8 760 aa10.57□□□□□ -0.72
CPNE3-206ENST00000523469 ABI2Q9NYB9 513 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-206ENST00000523469 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
CPNE3-206ENST00000523469 MMP20O60882 483 aa10.56□□□□□ -0.72
CPNE3-206ENST00000523469 CELA2BP08218 269 aaPredicted RBP10.56□□□□□ -0.72
CPNE3-206ENST00000523469 LYPD4Q6UWN0 246 aa10.56□□□□□ -0.72
CPNE3-206ENST00000523469 TMEM63CQ9P1W3 806 aa10.56□□□□□ -0.72
CPNE3-206ENST00000523469 OIP5O43482 229 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 PSAPP07602 524 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 EPXP11678 715 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 SOX18P35713 384 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
CPNE3-206ENST00000523469 PCSK7Q16549 785 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
CPNE3-206ENST00000523469 DMRTB1Q96MA1 342 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 MDFIQ99750 246 aa10.55□□□□□ -0.72
CPNE3-206ENST00000523469 UBE2OQ9C0C9 1292 aaKnown RBP10.55□□□□□ -0.72
CPNE3-206ENST00000523469 ELOA3CA0A087WX78 387 aaPredicted RBP10.54□□□□□ -0.72
CPNE3-206ENST00000523469 ELOA3DA6NLF2 546 aaPredicted RBP10.54□□□□□ -0.72
CPNE3-206ENST00000523469 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 ELOA3BQ3SY89 546 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 ZNF385CQ66K41 422 aaPredicted RBP10.54□□□□□ -0.72
CPNE3-206ENST00000523469 C1orf229Q6ZS94 237 aaPredicted RBP10.54□□□□□ -0.72
CPNE3-206ENST00000523469 TMC7Q7Z402 723 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 GALNT6Q8NCL4 622 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 ELOA3Q8NG57 546 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 OR13H1Q8NG92 308 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 EDARADDQ8WWZ3 215 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 IGFLR1Q9H665 355 aa10.54□□□□□ -0.72
CPNE3-206ENST00000523469 DNAJB12Q9NXW2 375 aaKnown RBP10.54□□□□□ -0.72
CPNE3-206ENST00000523469 TNFRSF21O75509 655 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 IGHA2P01877 340 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
CPNE3-206ENST00000523469 ALAS2P22557 587 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 ADH7P40394 386 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 NRLP54845 237 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 PLAURQ03405 335 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 TBC1D8BQ0IIM8 1120 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 SVOPQ8N4V2 548 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 TRPM4Q8TD43 1214 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 SNX29Q8TEQ0 813 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 ASB16Q96NS5 453 aa10.53□□□□□ -0.72
CPNE3-206ENST00000523469 NEFLP07196 543 aa10.52□□□□□ -0.73
CPNE3-206ENST00000523469 GPLD1P80108 840 aa10.52□□□□□ -0.73
CPNE3-206ENST00000523469 TMCO4Q5TGY1 634 aa10.52□□□□□ -0.73
CPNE3-206ENST00000523469 PMEPA1Q969W9 287 aa10.52□□□□□ -0.73
CPNE3-206ENST00000523469 GPR182O15218 404 aa10.51□□□□□ -0.73
CPNE3-206ENST00000523469 LORP23490 312 aaPredicted RBP10.51□□□□□ -0.73
CPNE3-206ENST00000523469 ALKBH8Q96BT7 664 aaKnown RBP10.51□□□□□ -0.73
CPNE3-206ENST00000523469 ENAMQ9NRM1 1142 aa10.51□□□□□ -0.73
CPNE3-206ENST00000523469 CNTN3Q9P232 1028 aa10.51□□□□□ -0.73
CPNE3-206ENST00000523469 PHF20L1A8MW92 1017 aa10.5□□□□□ -0.73
CPNE3-206ENST00000523469 PHACTR2O75167 634 aa10.5□□□□□ -0.73
CPNE3-206ENST00000523469 C1orf127Q8N9H9 656 aa10.5□□□□□ -0.73
CPNE3-206ENST00000523469 SLC6A14Q9UN76 642 aa10.5□□□□□ -0.73
CPNE3-206ENST00000523469 ZBTB42B2RXF5 422 aa10.49□□□□□ -0.73
CPNE3-206ENST00000523469 SHISA8B8ZZ34 492 aa10.49□□□□□ -0.73
CPNE3-206ENST00000523469 CES1P23141 567 aa10.49□□□□□ -0.73
CPNE3-206ENST00000523469 NIF3L1Q9GZT8 377 aa10.49□□□□□ -0.73
CPNE3-206ENST00000523469 FOXD3Q9UJU5 478 aaPredicted RBP10.49□□□□□ -0.73
CPNE3-206ENST00000523469 TREHO43280 583 aa10.48□□□□□ -0.73
CPNE3-206ENST00000523469 ARHGEF15O94989 841 aa10.48□□□□□ -0.73
CPNE3-206ENST00000523469 MLLT1Q03111 559 aaPredicted RBP10.48□□□□□ -0.73
CPNE3-206ENST00000523469 HYAL2Q12891 473 aa10.48□□□□□ -0.73
CPNE3-206ENST00000523469 BTBD6Q96KE9 485 aa10.48□□□□□ -0.73
CPNE3-206ENST00000523469 CHRDQ9H2X0 955 aa10.48□□□□□ -0.73
CPNE3-206ENST00000523469 LOC102724428A0A0B4J2F2 783 aa10.47□□□□□ -0.73
CPNE3-206ENST00000523469 CYP2E1P05181 493 aaPredicted RBP10.47□□□□□ -0.73
CPNE3-206ENST00000523469 SIK1P57059 783 aa10.47□□□□□ -0.73
CPNE3-206ENST00000523469 PLCB3Q01970 1234 aa10.47□□□□□ -0.73
CPNE3-206ENST00000523469 CHSY3Q70JA7 882 aa10.47□□□□□ -0.73
CPNE3-206ENST00000523469 FAM35AQ86V20 835 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms