RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 PCCAP05165 728 aaPredicted RBP13.4□□□□□ -0.26
DENND3-220ENST00000523066 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
DENND3-220ENST00000523066 NEXNQ0ZGT2 675 aa13.4□□□□□ -0.26
DENND3-220ENST00000523066 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
DENND3-220ENST00000523066 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
DENND3-220ENST00000523066 DICER1Q9UPY3 1922 aaKnown RBP13.4□□□□□ -0.26
DENND3-220ENST00000523066 TIAM2Q8IVF5 1701 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 ALDH1B1P30837 517 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 BEND3Q5T5X7 828 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
DENND3-220ENST00000523066 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
DENND3-220ENST00000523066 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
DENND3-220ENST00000523066 GCKRQ14397 625 aa13.38□□□□□ -0.27
DENND3-220ENST00000523066 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
DENND3-220ENST00000523066 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
DENND3-220ENST00000523066 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
DENND3-220ENST00000523066 H7C1W4 665 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 CASP7P55210 303 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
DENND3-220ENST00000523066 CCDC93Q567U6 631 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
DENND3-220ENST00000523066 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 ZBED9Q6R2W3 1325 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 CDHR2Q9BYE9 1310 aa13.37□□□□□ -0.27
DENND3-220ENST00000523066 PDE8AO60658 829 aa13.36□□□□□ -0.27
DENND3-220ENST00000523066 RARSP54136 660 aaKnown RBP13.36□□□□□ -0.27
DENND3-220ENST00000523066 GRAPQ13588 217 aa13.36□□□□□ -0.27
DENND3-220ENST00000523066 ALDH1L2Q3SY69 923 aa13.36□□□□□ -0.27
DENND3-220ENST00000523066 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
DENND3-220ENST00000523066 GRAPLQ8TC17 118 aaPredicted RBP13.36□□□□□ -0.27
DENND3-220ENST00000523066 TAOK3Q9H2K8 898 aa13.36□□□□□ -0.27
DENND3-220ENST00000523066 LMNB1P20700 586 aa13.35□□□□□ -0.27
DENND3-220ENST00000523066 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
DENND3-220ENST00000523066 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
DENND3-220ENST00000523066 LRRC37AA6NMS7 1700 aa13.35□□□□□ -0.27
DENND3-220ENST00000523066 COL4A5P29400 1685 aa13.34□□□□□ -0.27
DENND3-220ENST00000523066 BCAR3O75815 825 aa13.34□□□□□ -0.27
DENND3-220ENST00000523066 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
DENND3-220ENST00000523066 FKBP4Q02790 459 aaKnown RBP eCLIP13.34□□□□□ -0.27
DENND3-220ENST00000523066 SOGA3Q5TF21 947 aa13.34□□□□□ -0.27
DENND3-220ENST00000523066 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
DENND3-220ENST00000523066 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
DENND3-220ENST00000523066 LTBP3Q9NS15 1303 aa13.34□□□□□ -0.27
DENND3-220ENST00000523066 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
DENND3-220ENST00000523066 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 CTSWP56202 376 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 TTLL11Q8NHH1 800 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 SRCIN1Q9C0H9 1055 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 GREM2Q9H772 168 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 PTPRCP08575 1304 aa13.33□□□□□ -0.28
DENND3-220ENST00000523066 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
DENND3-220ENST00000523066 BBOX1O75936 387 aa13.32□□□□□ -0.28
DENND3-220ENST00000523066 CCDC152Q4G0S7 254 aa13.32□□□□□ -0.28
DENND3-220ENST00000523066 EPHA10Q5JZY3 1008 aa13.32□□□□□ -0.28
DENND3-220ENST00000523066 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
DENND3-220ENST00000523066 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
DENND3-220ENST00000523066 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
DENND3-220ENST00000523066 GRM8O00222 908 aa13.31□□□□□ -0.28
DENND3-220ENST00000523066 ALDH1L1O75891 902 aa13.31□□□□□ -0.28
DENND3-220ENST00000523066 NBPF7P0C2Y1 421 aaPredicted RBP13.31□□□□□ -0.28
DENND3-220ENST00000523066 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
DENND3-220ENST00000523066 FOXO4P98177 505 aa13.31□□□□□ -0.28
DENND3-220ENST00000523066 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
DENND3-220ENST00000523066 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
DENND3-220ENST00000523066 GPSM2P81274 684 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 SUCLG2Q96I99 432 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
DENND3-220ENST00000523066 PSMD1Q99460 953 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 GPBP1L1Q9HC44 474 aaPredicted RBP13.3□□□□□ -0.28
DENND3-220ENST00000523066 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
DENND3-220ENST00000523066 C9orf78Q9NZ63 289 aaPredicted RBP13.3□□□□□ -0.28
DENND3-220ENST00000523066 CSF1RP07333 972 aa13.29□□□□□ -0.28
DENND3-220ENST00000523066 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
DENND3-220ENST00000523066 BRPF1P55201 1214 aaPredicted RBP13.29□□□□□ -0.28
DENND3-220ENST00000523066 AOC3Q16853 763 aa13.29□□□□□ -0.28
DENND3-220ENST00000523066 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
DENND3-220ENST00000523066 MPNDQ8N594 471 aa13.29□□□□□ -0.28
DENND3-220ENST00000523066 FRAT1Q92837 279 aaPredicted RBP13.29□□□□□ -0.28
DENND3-220ENST00000523066 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
DENND3-220ENST00000523066 ITGA6P23229 1130 aa13.28□□□□□ -0.28
DENND3-220ENST00000523066 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
DENND3-220ENST00000523066 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
DENND3-220ENST00000523066 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
DENND3-220ENST00000523066 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
DENND3-220ENST00000523066 ZNF541Q9H0D2 1346 aa13.28□□□□□ -0.28
DENND3-220ENST00000523066 A0A1B0GUL6 1792 aa13.27□□□□□ -0.28
DENND3-220ENST00000523066 KIF3CO14782 793 aa13.27□□□□□ -0.29
DENND3-220ENST00000523066 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
DENND3-220ENST00000523066 DDNO94850 711 aaPredicted RBP13.27□□□□□ -0.29
DENND3-220ENST00000523066 LARGE2Q8N3Y3 721 aa13.27□□□□□ -0.29
DENND3-220ENST00000523066 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms